| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is btuB [H]
Identifier: 37520873
GI number: 37520873
Start: 1392397
End: 1395117
Strand: Direct
Name: btuB [H]
Synonym: glr1304
Alternate gene names: 37520873
Gene position: 1392397-1395117 (Clockwise)
Preceding gene: 37520870
Following gene: 37520874
Centisome position: 29.89
GC content: 60.86
Gene sequence:
>2721_bases GTGGAAGGGAGTGAACGCGTCATGAACACTAAGTGCGGACCCAGGCCGTGTCTATGGCTGATGGTGCCAATCGCTCTCGG TTTCAGCTTGTCGGACACGGCGGTAACCGCACAACCGACGGTGCGGACGGCAATCGCCCCACAGAGTACCAGTGCCCAGA TCGGTGGCGAGGGGGCAAAGGCTTTGCTGCGGTCAGCAGCCGGCACCGCCGCCGACCTGGAACACCGCCCGGCCCTATGG GATTGGACCCGGCCGCTCAGCGCACCCGCCAAAGTCAGCCAGGCGGGGGGAGCGGCGTCGACTGCACCTGCCGCTGTGTC TCAAGGAGCTGCCGCCCCGGGGGAGAGCGCCGATATCCTCGATGAAGTCTCGGTCACCGCCACCCGCCGCCCCACCCGGC AACGCGACACGACGGCGACGACCTATACGGTCAAAAGAGCAGACTTCCAGGTTCAAGGGGCCAGAACGGTCACAGACGCG CTGGTGCTGATTCCCGGCTTCGAGGGGCCGCCCTCTTTGGGTGGGGTGCGCAACTCGGGGTTCAATTTCTTGCGGGGCTT CGACGACCAGCGGTTTCTGGTGCTCAGGGACGGAGTGTCGCTGCAGCGCTCCGGCAACAACCGCTCCGACATCACACGCT TCAACGTCGATGAGCTGGAAAGCATCGAGGTGGTGACCGGCGGTGCAACGCTGCGCTACGGTTCTGGAGCCGTGGGCGGT GTGATCAACTTAATTACCGAGACACCCAGGGGACTGCCGAAGTTGACTCTCGCCTACGAAGCGGGCAGCTACGGCTTTAG CCGCTACCTGGCCAAGTACGGCGGCGGCGACGACACGCTCAGCTACAACTTGATCTTCGCGAGCCTGGTCGCCTTCAACA ACTATCCTTACAGTTTCACCCTGCCCAACCAGGCGCGCTTCTACGGTCCCACGGTCAATCCAAATGCGGCGGCCTCGGGC CTCGCCTTCGATGCGGACGGCAACCCGATTAGCTCCTTCGGCCAGCCCAATCCCGACCCTGAGAACAGCGGCGACATCGA CCTGTACGGCTACCTCAAGCCGGAGGTCGGCCCGCCCATCACCGTCAAAGGTGTTGCAGACAATGCTTTTAACGCCAACG ACAGCTACGCGGGCAAGCTCGTCTTCAAGCCCGATCCCGCCAACAAACTGACCCTGAGCCTCCACCAGCAAAATTCAAAG TTCAGCAACGACGGCCCCGGCGCTTACGGTTTTATTCCGTGTTTTGGCGGCGCTCTGCCTCCAGGGGTCGACAACGGGAC TTTGAGTTTCTCCCGCTTCTTGCCCCTCAATCCAGACGGCAGCGAATCGGCCTGCACCGTGACGCCCTACATCGTCAACA CCGCGAGCGTGAATTTGGGCATCAACTCGCTGCTGGGCAACTACGCCGCTCCCTACACCACCTCGCTCGATGGAAGGGTG AACTTCCCGGCCGGGAGCGCCTACCCGAACGCAGAACCGGCCACCGGTACCCAAGTCAGCTACCGGGTCGACAACCAGAC ACAGACCGAGGCCGCTTTGTTCTGGGACTACACGCTCACGCCCACCGCCTCCATCAACAGCTACATTTCCTACTACCGAT TGACATCCACCGCCTTCATCGCGCCGCTCTTCTTTAATACCAACTTCTTCGGAGCGGGCGAGTCGCCCTTTGCCGTCTTC CAACCGTCGCAGCCCTACAACGAGGGCAACAAGCTCGAAATCCAGAGCGCACTGAACACCCAACTCTCCGCCGGACAGAC CCTCTCCTTCGGGATTAACTTCGTGCAGGACCGCAGCTATGCCCAGGTCGGGGGGGGCACCAGGTTCGTCGACAGCGCCA TCTCGCGCACGTCCGCCTTTTTAATCGACGACATCAGCTTTAGCGACCAACTCAAGGCAAACCTCGGTTTTCGCTATACC TACAGCACCCAGTTCGGCAGCGTCGGCACTCCCGCAGTCGGCATCCGCTACACCCCGACGAACTTCCTCTCGCTGCGGGC CAACGGCTCCTACGTGTTCAACGCGCCAAGCATCGCCGACCTCACCGTTACGGGAGGCTTTCTCCTGGCGAATCCCGGGC TGCGCCCCGAATCGGGCGTCACCTACGATGTCGGCGTCGATATTACCCCGGCGCAAAACCTGGGTGTGCAGGTCACCTAC TTCAACACCTATCTGGACGGATTCATCGGTTTTGCAGCGCTCATTCAAGATGGCAACCTGCGCTTTCAACGGCAGAATCA GAACACCCGGATTGCCTCGGGCATTGAGGTGGCAGCCAACTGGCAGCTCACCGACCAGCTGCGGCTGAGAGTCGCCTACA CGAACACCGACGCACGCAATGTGGGTGCAGTCGACAGCGTGGAACAGTCCACTTACCCGTATTTCTTCCAGTTTCAAGAC CAGAGCATCCCTTTCAACAAAATTGCCGCTGCCCTTTCCTACGCAAATCAGAGGCTGAATGCCTCGCTGCTTTTTCGCTA CGACGACGGCAAGCGGCGCGGGGTGACCGGCCTGGGAGGCTCGACCGATTTCACCCCATCCTTTGCAACCCTGGACCTCA ATGTCGAAGTTCCCATTGCACAGAACTTTACTTTGACCGGTAGTGTCTTCAACTTGACCGATACGCAGTACGAGTACCTC AGCGGCATCCCGGCTCCGGGCACCACCTTTCGTATAGGCGGCAGGATTGAATTTGGAGGGGGTGCTCAGGGGAGCAATTA A
Upstream 100 bases:
>100_bases CACTGTCGGCCCACATAGCCTAATCGCCGCGGTCGCGGCAGTCCATCCTGGCCAGGGGGATACAGGGATTCGGTCACTTC CGATACTGTGAAGATTGCCG
Downstream 100 bases:
>100_bases CTGCGGGTCTGTTTTGGCACCGTCATCGGCGCAGGGTGTTGGAGCCTTGTGGCCCTCACCAACAGGGGTTGCTGGCCGCT GGTACTTTTGGCTATCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 906; Mature: 906
Protein sequence:
>906_residues MEGSERVMNTKCGPRPCLWLMVPIALGFSLSDTAVTAQPTVRTAIAPQSTSAQIGGEGAKALLRSAAGTAADLEHRPALW DWTRPLSAPAKVSQAGGAASTAPAAVSQGAAAPGESADILDEVSVTATRRPTRQRDTTATTYTVKRADFQVQGARTVTDA LVLIPGFEGPPSLGGVRNSGFNFLRGFDDQRFLVLRDGVSLQRSGNNRSDITRFNVDELESIEVVTGGATLRYGSGAVGG VINLITETPRGLPKLTLAYEAGSYGFSRYLAKYGGGDDTLSYNLIFASLVAFNNYPYSFTLPNQARFYGPTVNPNAAASG LAFDADGNPISSFGQPNPDPENSGDIDLYGYLKPEVGPPITVKGVADNAFNANDSYAGKLVFKPDPANKLTLSLHQQNSK FSNDGPGAYGFIPCFGGALPPGVDNGTLSFSRFLPLNPDGSESACTVTPYIVNTASVNLGINSLLGNYAAPYTTSLDGRV NFPAGSAYPNAEPATGTQVSYRVDNQTQTEAALFWDYTLTPTASINSYISYYRLTSTAFIAPLFFNTNFFGAGESPFAVF QPSQPYNEGNKLEIQSALNTQLSAGQTLSFGINFVQDRSYAQVGGGTRFVDSAISRTSAFLIDDISFSDQLKANLGFRYT YSTQFGSVGTPAVGIRYTPTNFLSLRANGSYVFNAPSIADLTVTGGFLLANPGLRPESGVTYDVGVDITPAQNLGVQVTY FNTYLDGFIGFAALIQDGNLRFQRQNQNTRIASGIEVAANWQLTDQLRLRVAYTNTDARNVGAVDSVEQSTYPYFFQFQD QSIPFNKIAAALSYANQRLNASLLFRYDDGKRRGVTGLGGSTDFTPSFATLDLNVEVPIAQNFTLTGSVFNLTDTQYEYL SGIPAPGTTFRIGGRIEFGGGAQGSN
Sequences:
>Translated_906_residues MEGSERVMNTKCGPRPCLWLMVPIALGFSLSDTAVTAQPTVRTAIAPQSTSAQIGGEGAKALLRSAAGTAADLEHRPALW DWTRPLSAPAKVSQAGGAASTAPAAVSQGAAAPGESADILDEVSVTATRRPTRQRDTTATTYTVKRADFQVQGARTVTDA LVLIPGFEGPPSLGGVRNSGFNFLRGFDDQRFLVLRDGVSLQRSGNNRSDITRFNVDELESIEVVTGGATLRYGSGAVGG VINLITETPRGLPKLTLAYEAGSYGFSRYLAKYGGGDDTLSYNLIFASLVAFNNYPYSFTLPNQARFYGPTVNPNAAASG LAFDADGNPISSFGQPNPDPENSGDIDLYGYLKPEVGPPITVKGVADNAFNANDSYAGKLVFKPDPANKLTLSLHQQNSK FSNDGPGAYGFIPCFGGALPPGVDNGTLSFSRFLPLNPDGSESACTVTPYIVNTASVNLGINSLLGNYAAPYTTSLDGRV NFPAGSAYPNAEPATGTQVSYRVDNQTQTEAALFWDYTLTPTASINSYISYYRLTSTAFIAPLFFNTNFFGAGESPFAVF QPSQPYNEGNKLEIQSALNTQLSAGQTLSFGINFVQDRSYAQVGGGTRFVDSAISRTSAFLIDDISFSDQLKANLGFRYT YSTQFGSVGTPAVGIRYTPTNFLSLRANGSYVFNAPSIADLTVTGGFLLANPGLRPESGVTYDVGVDITPAQNLGVQVTY FNTYLDGFIGFAALIQDGNLRFQRQNQNTRIASGIEVAANWQLTDQLRLRVAYTNTDARNVGAVDSVEQSTYPYFFQFQD QSIPFNKIAAALSYANQRLNASLLFRYDDGKRRGVTGLGGSTDFTPSFATLDLNVEVPIAQNFTLTGSVFNLTDTQYEYL SGIPAPGTTFRIGGRIEFGGGAQGSN >Mature_906_residues MEGSERVMNTKCGPRPCLWLMVPIALGFSLSDTAVTAQPTVRTAIAPQSTSAQIGGEGAKALLRSAAGTAADLEHRPALW DWTRPLSAPAKVSQAGGAASTAPAAVSQGAAAPGESADILDEVSVTATRRPTRQRDTTATTYTVKRADFQVQGARTVTDA LVLIPGFEGPPSLGGVRNSGFNFLRGFDDQRFLVLRDGVSLQRSGNNRSDITRFNVDELESIEVVTGGATLRYGSGAVGG VINLITETPRGLPKLTLAYEAGSYGFSRYLAKYGGGDDTLSYNLIFASLVAFNNYPYSFTLPNQARFYGPTVNPNAAASG LAFDADGNPISSFGQPNPDPENSGDIDLYGYLKPEVGPPITVKGVADNAFNANDSYAGKLVFKPDPANKLTLSLHQQNSK FSNDGPGAYGFIPCFGGALPPGVDNGTLSFSRFLPLNPDGSESACTVTPYIVNTASVNLGINSLLGNYAAPYTTSLDGRV NFPAGSAYPNAEPATGTQVSYRVDNQTQTEAALFWDYTLTPTASINSYISYYRLTSTAFIAPLFFNTNFFGAGESPFAVF QPSQPYNEGNKLEIQSALNTQLSAGQTLSFGINFVQDRSYAQVGGGTRFVDSAISRTSAFLIDDISFSDQLKANLGFRYT YSTQFGSVGTPAVGIRYTPTNFLSLRANGSYVFNAPSIADLTVTGGFLLANPGLRPESGVTYDVGVDITPAQNLGVQVTY FNTYLDGFIGFAALIQDGNLRFQRQNQNTRIASGIEVAANWQLTDQLRLRVAYTNTDARNVGAVDSVEQSTYPYFFQFQD QSIPFNKIAAALSYANQRLNASLLFRYDDGKRRGVTGLGGSTDFTPSFATLDLNVEVPIAQNFTLTGSVFNLTDTQYEYL SGIPAPGTTFRIGGRIEFGGGAQGSN
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 96611; Mature: 96611
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGSERVMNTKCGPRPCLWLMVPIALGFSLSDTAVTAQPTVRTAIAPQSTSAQIGGEGAK CCCCCCHHCCCCCCCCCCEEEEEHHHCCCCCCCEEECCCCEEEEECCCCCCCCCCCHHHH ALLRSAAGTAADLEHRPALWDWTRPLSAPAKVSQAGGAASTAPAAVSQGAAAPGESADIL HHHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCHHH DEVSVTATRRPTRQRDTTATTYTVKRADFQVQGARTVTDALVLIPGFEGPPSLGGVRNSG HHCEEEECCCCCCCCCCCEEEEEEEECCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCC FNFLRGFDDQRFLVLRDGVSLQRSGNNRSDITRFNVDELESIEVVTGGATLRYGSGAVGG CHHHHCCCCCEEEEEECCCEEEECCCCCCCEEEECCCCCCEEEEEECCEEEEECCCCHHH VINLITETPRGLPKLTLAYEAGSYGFSRYLAKYGGGDDTLSYNLIFASLVAFNNYPYSFT HHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCEEEE LPNQARFYGPTVNPNAAASGLAFDADGNPISSFGQPNPDPENSGDIDLYGYLKPEVGPPI CCCCCEEECCCCCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCE TVKGVADNAFNANDSYAGKLVFKPDPANKLTLSLHQQNSKFSNDGPGAYGFIPCFGGALP EEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHCCCCCC PGVDNGTLSFSRFLPLNPDGSESACTVTPYIVNTASVNLGINSLLGNYAAPYTTSLDGRV CCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEEEECCHHHHHCCCCCCEEECCCCEE NFPAGSAYPNAEPATGTQVSYRVDNQTQTEAALFWDYTLTPTASINSYISYYRLTSTAFI ECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHEEEEHHHEE APLFFNTNFFGAGESPFAVFQPSQPYNEGNKLEIQSALNTQLSAGQTLSFGINFVQDRSY EEEEECCEECCCCCCCEEEECCCCCCCCCCEEEEHHHHCCHHCCCCEEEECEEEEECCCE AQVGGGTRFVDSAISRTSAFLIDDISFSDQLKANLGFRYTYSTQFGSVGTPAVGIRYTPT EECCCCHHHHHHHHHHCEEEEEECCCCCCHHHHCCCEEEEECCCCCCCCCCEEEEEECCC NFLSLRANGSYVFNAPSIADLTVTGGFLLANPGLRPESGVTYDVGVDITPAQNLGVQVTY CEEEEEECCCEEECCCCEEEEEEECCEEEECCCCCCCCCCEEEECEEECCCCCCCEEEEE FNTYLDGFIGFAALIQDGNLRFQRQNQNTRIASGIEVAANWQLTDQLRLRVAYTNTDARN EHHHHHHHHHHHHHEECCCEEEEECCCCCEEECCEEEEEEEEEEEEEEEEEEEECCCCCC VGAVDSVEQSTYPYFFQFQDQSIPFNKIAAALSYANQRLNASLLFRYDDGKRRGVTGLGG CCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC STDFTPSFATLDLNVEVPIAQNFTLTGSVFNLTDTQYEYLSGIPAPGTTFRIGGRIEFGG CCCCCCCEEEEEEEEEECCCCCEEEECEEEECCCCHHHHHCCCCCCCCEEEECCEEEECC GAQGSN CCCCCC >Mature Secondary Structure MEGSERVMNTKCGPRPCLWLMVPIALGFSLSDTAVTAQPTVRTAIAPQSTSAQIGGEGAK CCCCCCHHCCCCCCCCCCEEEEEHHHCCCCCCCEEECCCCEEEEECCCCCCCCCCCHHHH ALLRSAAGTAADLEHRPALWDWTRPLSAPAKVSQAGGAASTAPAAVSQGAAAPGESADIL HHHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCHHH DEVSVTATRRPTRQRDTTATTYTVKRADFQVQGARTVTDALVLIPGFEGPPSLGGVRNSG HHCEEEECCCCCCCCCCCEEEEEEEECCEEEECCCEEEEEEEEEECCCCCCCCCCCCCCC FNFLRGFDDQRFLVLRDGVSLQRSGNNRSDITRFNVDELESIEVVTGGATLRYGSGAVGG CHHHHCCCCCEEEEEECCCEEEECCCCCCCEEEECCCCCCEEEEEECCEEEEECCCCHHH VINLITETPRGLPKLTLAYEAGSYGFSRYLAKYGGGDDTLSYNLIFASLVAFNNYPYSFT HHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCEEEE LPNQARFYGPTVNPNAAASGLAFDADGNPISSFGQPNPDPENSGDIDLYGYLKPEVGPPI CCCCCEEECCCCCCCCCCCCEEECCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCE TVKGVADNAFNANDSYAGKLVFKPDPANKLTLSLHQQNSKFSNDGPGAYGFIPCFGGALP EEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHCCCCCC PGVDNGTLSFSRFLPLNPDGSESACTVTPYIVNTASVNLGINSLLGNYAAPYTTSLDGRV CCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEEEEEECCHHHHHCCCCCCEEECCCCEE NFPAGSAYPNAEPATGTQVSYRVDNQTQTEAALFWDYTLTPTASINSYISYYRLTSTAFI ECCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHEEEEHHHEE APLFFNTNFFGAGESPFAVFQPSQPYNEGNKLEIQSALNTQLSAGQTLSFGINFVQDRSY EEEEECCEECCCCCCCEEEECCCCCCCCCCEEEEHHHHCCHHCCCCEEEECEEEEECCCE AQVGGGTRFVDSAISRTSAFLIDDISFSDQLKANLGFRYTYSTQFGSVGTPAVGIRYTPT EECCCCHHHHHHHHHHCEEEEEECCCCCCHHHHCCCEEEEECCCCCCCCCCEEEEEECCC NFLSLRANGSYVFNAPSIADLTVTGGFLLANPGLRPESGVTYDVGVDITPAQNLGVQVTY CEEEEEECCCEEECCCCEEEEEEECCEEEECCCCCCCCCCEEEECEEECCCCCCCEEEEE FNTYLDGFIGFAALIQDGNLRFQRQNQNTRIASGIEVAANWQLTDQLRLRVAYTNTDARN EHHHHHHHHHHHHHEECCCEEEEECCCCCEEECCEEEEEEEEEEEEEEEEEEEECCCCCC VGAVDSVEQSTYPYFFQFQDQSIPFNKIAAALSYANQRLNASLLFRYDDGKRRGVTGLGG CCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC STDFTPSFATLDLNVEVPIAQNFTLTGSVFNLTDTQYEYLSGIPAPGTTFRIGGRIEFGG CCCCCCCEEEEEEEEEECCCCCEEEECEEEECCCCHHHHHCCCCCCCCEEEECCEEEECC GAQGSN CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA