| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is recG [H]
Identifier: 37520847
GI number: 37520847
Start: 1357802
End: 1360237
Strand: Reverse
Name: recG [H]
Synonym: gvip187
Alternate gene names: 37520847
Gene position: 1360237-1357802 (Counterclockwise)
Preceding gene: 37520849
Following gene: 37520846
Centisome position: 29.2
GC content: 64.24
Gene sequence:
>2436_bases GTGTCGCACACCGAAGCGTTCGCCGAACTGCTCCAGCGTCTCCACCGCGCCCTGGCCGCGGAGGCCGACCGCGGCTTTGT GAACCTCAAAGGCTCCCGCCAGTACTTCGCAGAATTCTTGAGCGAAACGCTCGCCACCGCACCGGGCGGTCTGGAGGACA AGGACTCGGCGCGGCGCTGGCAGGATCTGGGGGCGCGCTACGCCCGTTACGCCGACCTGGAAAATGCCGCGCGCGCCCAT CTGGTGGCCGAGACCCGGCGGTTTTTGCACCGAATCCGCCGCTCCCTCGAAACACCTGCTCCGGAGCGCCCCAACGGCAA ACCCACTGCGCCACCCGAAGCGGCCATCCTCGATCAGCCGATGACCAAGCTTGGCGGCATCGGGCCGAAGCTTGCCGCCC AACTTGAAAAACTTGGACTGACGACGATCGGGCAGGTGCTGCGCTACTACCCGCGCGACTACCTCGATTACAGCAACCGC ACGACGATCAAAGTCTGCCAACCGGGCGAAATGGTCACTTTGCTCGGCCAGGTGCGCCGCTGCCGCTGCTTTACCAGCCC CCGCAACCACAAACTGTCGATTTTTACCCTCACCCTGGGCGACGGCACCGGCCAGATGCAGCTGTCGCAGTTTTTTGCCG GGACGCGCTTTACCCACCGCGGCTGGCAGGAAGCCCAGATGAAGCAGTACCCGCGCGGGGCGACAGTGGCCGCAAGCGGC CTGGTCAAACGCTCCACCACCGGACTGACCTTGCAGGAGCCGCAACTGGAGGTGCTGGACGAAGGCGAAGATTTGCAGAA TCTCACCAAGATCGTACCGGTCTATGCGCTCGCCGAAGGGGTGGGGGCGGGGGTGGTGCGCCGGGCGGTCAAGGCCGCAT TGCCCTTCGCCAACGCCTTCACAGACCCGCTGCCGGCTGCTGTCCGCACATCGCTGGGTCTATTGGACCTACCGGGGGCG ATTCGGGCGGTCCATTACCCCGAGAGCGCCGAACACAAGCTTCAGGCCCGACGGCGACTGGTTTTCGACGAATTTTTCTT TTTGCAGTTGGGCCTGCTGCAGCGCCGTCACCGCCAGAAGCGCCAGAGTGCGGGTATCGCCTTTCGCACCCGCGGCGAAC TGATCGAGCAGTTTTATAAGCTTTTGCCCTTTGCCTTTACCGGCGCCCAGAAGCGGGTGGTCGAGGAGGTGCTGGCCGAT CTTGGATCTCCCGAGCCGATGAATCGGCTGATCCAGGGGGACGTCGGTTCCGGCAAGACGGTGGTGGCGGTGGTCGCCAT GCTCACCGCCTTGCAGTCGGGCTACCAGACCGCCCTGATGGCCCCCACCGAAGTCCTGGCCGAGCAGCACTATCAAAAAC TCGTGCAGTGGCTCTCGCAGCTGCACCTGCCGGTGGAACTCGTCACCGGTTCGGTGCGCGCCGCTCGCCGACGCGATGTG CTCAGGCAACTGGCCTCGGGCGAATTGAACGTGGTGGTGGGCACCCACGCCCTGATTCAAGACGGGGTGCAGTTCGCCAA TCTGGGCCTAGTGGTGATCGACGAGCAGCACCGCTTTGGGGTCGGCCAGCGCGCCCGGTTGCAAAACAAAGGCCGCAACC CGGACCTGCTCACCATGACCGCGACACCGATCCCGCGCACCCTGGCGCTCACGCTGCACGGCGATCTGGACGTCTCGCAA ATCGACGAGTTGCCGCCGGGGCGCAAACCGGTGCGTACCACCGTCGTCACCCCCTCCGAGCGCACCCAGGTGAATGAACT GATCCGCCGCCAGATCCTCGAAGGCCGTCAAGCCTACATCGTGCTGCCGCTCATCGAAGAATCCGAAAAAGTCGACTTGC GATCGGCCATCGAAGAGCACGAACGCCTCAAAGAAAAAATCTTTGCGGAATTTCGCTTGGGACTGTTGCACGGACGGCTC AAATCTGAGGAAAAAGAAGCGGTGATCGGGGCCTTTCGGCGGCACGAACTCGACCTCCTCGTCTCGACAACCGTCGTCGA AGTCGGTGTCGATGTGCCCAACGCCACGGTGATGCTCATCGAGCACGCCGAGCGGTTCGGGCTTGCCCAGTTGCACCAGT TGCGCGGCCGGGTGGGCCGGGGGGCGAACCAGAGCTTTTGCCTGTTGATGAGCGCCACCAAGACCGAATCGGCTTTGCAG CGGCTGCGGGTGCTCGAACAATCGAACGACGGCTTTTTGATCGCCGAGATGGACCTGCGCCTGCGCGGCCCCGGCGAGGT GATGGGTACGCGCCAGTCGGGCCTGCCGGACATGGTGCTCTCGTCGCTGGTCGAAGACCAGGACAGCCTTGAGCTAGCCC GCCGCGAGGCCCAATCGCTCATCGAGCGCGATCCGGAGCTGACCGCCCATCCGCTGTTGCGCGCCGAACTTGCCGGTCGG CTCGACCGGCTGATGGACGGCGCCATCCTCAATTAA
Upstream 100 bases:
>100_bases AGAAGCAATACGATCGGAGCGCTCGATATTCGCGGGGGTGCTCACACCACATTTAGCGCCGCTCAGGCATAACTTCCCGG TCAGTCCTACAATGTGAGCT
Downstream 100 bases:
>100_bases AAATTGACGCCGCTGTGGCTTAATTTTTGGTTCCCACCAGCCTATCTAAAAGTGTCAGACCGGTTCTAATCACTTTATTG GGTATTGGTGGGCTCTATCC
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 811; Mature: 810
Protein sequence:
>811_residues MSHTEAFAELLQRLHRALAAEADRGFVNLKGSRQYFAEFLSETLATAPGGLEDKDSARRWQDLGARYARYADLENAARAH LVAETRRFLHRIRRSLETPAPERPNGKPTAPPEAAILDQPMTKLGGIGPKLAAQLEKLGLTTIGQVLRYYPRDYLDYSNR TTIKVCQPGEMVTLLGQVRRCRCFTSPRNHKLSIFTLTLGDGTGQMQLSQFFAGTRFTHRGWQEAQMKQYPRGATVAASG LVKRSTTGLTLQEPQLEVLDEGEDLQNLTKIVPVYALAEGVGAGVVRRAVKAALPFANAFTDPLPAAVRTSLGLLDLPGA IRAVHYPESAEHKLQARRRLVFDEFFFLQLGLLQRRHRQKRQSAGIAFRTRGELIEQFYKLLPFAFTGAQKRVVEEVLAD LGSPEPMNRLIQGDVGSGKTVVAVVAMLTALQSGYQTALMAPTEVLAEQHYQKLVQWLSQLHLPVELVTGSVRAARRRDV LRQLASGELNVVVGTHALIQDGVQFANLGLVVIDEQHRFGVGQRARLQNKGRNPDLLTMTATPIPRTLALTLHGDLDVSQ IDELPPGRKPVRTTVVTPSERTQVNELIRRQILEGRQAYIVLPLIEESEKVDLRSAIEEHERLKEKIFAEFRLGLLHGRL KSEEKEAVIGAFRRHELDLLVSTTVVEVGVDVPNATVMLIEHAERFGLAQLHQLRGRVGRGANQSFCLLMSATKTESALQ RLRVLEQSNDGFLIAEMDLRLRGPGEVMGTRQSGLPDMVLSSLVEDQDSLELARREAQSLIERDPELTAHPLLRAELAGR LDRLMDGAILN
Sequences:
>Translated_811_residues MSHTEAFAELLQRLHRALAAEADRGFVNLKGSRQYFAEFLSETLATAPGGLEDKDSARRWQDLGARYARYADLENAARAH LVAETRRFLHRIRRSLETPAPERPNGKPTAPPEAAILDQPMTKLGGIGPKLAAQLEKLGLTTIGQVLRYYPRDYLDYSNR TTIKVCQPGEMVTLLGQVRRCRCFTSPRNHKLSIFTLTLGDGTGQMQLSQFFAGTRFTHRGWQEAQMKQYPRGATVAASG LVKRSTTGLTLQEPQLEVLDEGEDLQNLTKIVPVYALAEGVGAGVVRRAVKAALPFANAFTDPLPAAVRTSLGLLDLPGA IRAVHYPESAEHKLQARRRLVFDEFFFLQLGLLQRRHRQKRQSAGIAFRTRGELIEQFYKLLPFAFTGAQKRVVEEVLAD LGSPEPMNRLIQGDVGSGKTVVAVVAMLTALQSGYQTALMAPTEVLAEQHYQKLVQWLSQLHLPVELVTGSVRAARRRDV LRQLASGELNVVVGTHALIQDGVQFANLGLVVIDEQHRFGVGQRARLQNKGRNPDLLTMTATPIPRTLALTLHGDLDVSQ IDELPPGRKPVRTTVVTPSERTQVNELIRRQILEGRQAYIVLPLIEESEKVDLRSAIEEHERLKEKIFAEFRLGLLHGRL KSEEKEAVIGAFRRHELDLLVSTTVVEVGVDVPNATVMLIEHAERFGLAQLHQLRGRVGRGANQSFCLLMSATKTESALQ RLRVLEQSNDGFLIAEMDLRLRGPGEVMGTRQSGLPDMVLSSLVEDQDSLELARREAQSLIERDPELTAHPLLRAELAGR LDRLMDGAILN >Mature_810_residues SHTEAFAELLQRLHRALAAEADRGFVNLKGSRQYFAEFLSETLATAPGGLEDKDSARRWQDLGARYARYADLENAARAHL VAETRRFLHRIRRSLETPAPERPNGKPTAPPEAAILDQPMTKLGGIGPKLAAQLEKLGLTTIGQVLRYYPRDYLDYSNRT TIKVCQPGEMVTLLGQVRRCRCFTSPRNHKLSIFTLTLGDGTGQMQLSQFFAGTRFTHRGWQEAQMKQYPRGATVAASGL VKRSTTGLTLQEPQLEVLDEGEDLQNLTKIVPVYALAEGVGAGVVRRAVKAALPFANAFTDPLPAAVRTSLGLLDLPGAI RAVHYPESAEHKLQARRRLVFDEFFFLQLGLLQRRHRQKRQSAGIAFRTRGELIEQFYKLLPFAFTGAQKRVVEEVLADL GSPEPMNRLIQGDVGSGKTVVAVVAMLTALQSGYQTALMAPTEVLAEQHYQKLVQWLSQLHLPVELVTGSVRAARRRDVL RQLASGELNVVVGTHALIQDGVQFANLGLVVIDEQHRFGVGQRARLQNKGRNPDLLTMTATPIPRTLALTLHGDLDVSQI DELPPGRKPVRTTVVTPSERTQVNELIRRQILEGRQAYIVLPLIEESEKVDLRSAIEEHERLKEKIFAEFRLGLLHGRLK SEEKEAVIGAFRRHELDLLVSTTVVEVGVDVPNATVMLIEHAERFGLAQLHQLRGRVGRGANQSFCLLMSATKTESALQR LRVLEQSNDGFLIAEMDLRLRGPGEVMGTRQSGLPDMVLSSLVEDQDSLELARREAQSLIERDPELTAHPLLRAELAGRL DRLMDGAILN
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=684, Percent_Identity=41.3742690058479, Blast_Score=443, Evalue=1e-125, Organism=Escherichia coli, GI1787357, Length=413, Percent_Identity=37.046004842615, Blast_Score=273, Evalue=2e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 90165; Mature: 90034
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTEAFAELLQRLHRALAAEADRGFVNLKGSRQYFAEFLSETLATAPGGLEDKDSARRW CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH QDLGARYARYADLENAARAHLVAETRRFLHRIRRSLETPAPERPNGKPTAPPEAAILDQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCC MTKLGGIGPKLAAQLEKLGLTTIGQVLRYYPRDYLDYSNRTTIKVCQPGEMVTLLGQVRR HHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHCCCCCCEEEEECCCHHHHHHHHHHH CRCFTSPRNHKLSIFTLTLGDGTGQMQLSQFFAGTRFTHRGWQEAQMKQYPRGATVAASG HHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHH LVKRSTTGLTLQEPQLEVLDEGEDLQNLTKIVPVYALAEGVGAGVVRRAVKAALPFANAF HHHCCCCCCEECCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHC TDPLPAAVRTSLGLLDLPGAIRAVHYPESAEHKLQARRRLVFDEFFFLQLGLLQRRHRQK CCCCCHHHHHHCCCEECCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQSAGIAFRTRGELIEQFYKLLPFAFTGAQKRVVEEVLADLGSPEPMNRLIQGDVGSGKT HHHCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHH VVAVVAMLTALQSGYQTALMAPTEVLAEQHYQKLVQWLSQLHLPVELVTGSVRAARRRDV HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHH LRQLASGELNVVVGTHALIQDGVQFANLGLVVIDEQHRFGVGQRARLQNKGRNPDLLTMT HHHHHCCCEEEEECCHHHHHCCHHHHHCCEEEEECCHHCCCCCHHHHHCCCCCCCEEEEE ATPIPRTLALTLHGDLDVSQIDELPPGRKPVRTTVVTPSERTQVNELIRRQILEGRQAYI CCCCCCEEEEEEECCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEE VLPLIEESEKVDLRSAIEEHERLKEKIFAEFRLGLLHGRLKSEEKEAVIGAFRRHELDLL EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VSTTVVEVGVDVPNATVMLIEHAERFGLAQLHQLRGRVGRGANQSFCLLMSATKTESALQ HHHHHHEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHH RLRVLEQSNDGFLIAEMDLRLRGPGEVMGTRQSGLPDMVLSSLVEDQDSLELARREAQSL HHHHHHCCCCCEEEEEECEEECCCCHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH IERDPELTAHPLLRAELAGRLDRLMDGAILN HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SHTEAFAELLQRLHRALAAEADRGFVNLKGSRQYFAEFLSETLATAPGGLEDKDSARRW CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH QDLGARYARYADLENAARAHLVAETRRFLHRIRRSLETPAPERPNGKPTAPPEAAILDQP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCC MTKLGGIGPKLAAQLEKLGLTTIGQVLRYYPRDYLDYSNRTTIKVCQPGEMVTLLGQVRR HHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCHHHHCCCCCCEEEEECCCHHHHHHHHHHH CRCFTSPRNHKLSIFTLTLGDGTGQMQLSQFFAGTRFTHRGWQEAQMKQYPRGATVAASG HHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHH LVKRSTTGLTLQEPQLEVLDEGEDLQNLTKIVPVYALAEGVGAGVVRRAVKAALPFANAF HHHCCCCCCEECCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHC TDPLPAAVRTSLGLLDLPGAIRAVHYPESAEHKLQARRRLVFDEFFFLQLGLLQRRHRQK CCCCCHHHHHHCCCEECCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQSAGIAFRTRGELIEQFYKLLPFAFTGAQKRVVEEVLADLGSPEPMNRLIQGDVGSGKT HHHCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHH VVAVVAMLTALQSGYQTALMAPTEVLAEQHYQKLVQWLSQLHLPVELVTGSVRAARRRDV HHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHH LRQLASGELNVVVGTHALIQDGVQFANLGLVVIDEQHRFGVGQRARLQNKGRNPDLLTMT HHHHHCCCEEEEECCHHHHHCCHHHHHCCEEEEECCHHCCCCCHHHHHCCCCCCCEEEEE ATPIPRTLALTLHGDLDVSQIDELPPGRKPVRTTVVTPSERTQVNELIRRQILEGRQAYI CCCCCCEEEEEEECCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEE VLPLIEESEKVDLRSAIEEHERLKEKIFAEFRLGLLHGRLKSEEKEAVIGAFRRHELDLL EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VSTTVVEVGVDVPNATVMLIEHAERFGLAQLHQLRGRVGRGANQSFCLLMSATKTESALQ HHHHHHEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHH RLRVLEQSNDGFLIAEMDLRLRGPGEVMGTRQSGLPDMVLSSLVEDQDSLELARREAQSL HHHHHHCCCCCEEEEEECEEECCCCHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH IERDPELTAHPLLRAELAGRLDRLMDGAILN HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]