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The map label for this gene is cpcD

Identifier: 37520835

GI number: 37520835

Start: 1342761

End: 1342991

Strand: Direct

Name: cpcD

Synonym: gvip184

Alternate gene names: NA

Gene position: 1342761-1342991 (Clockwise)

Preceding gene: 37520834

Following gene: 37520836

Centisome position: 28.82

GC content: 64.94

Gene sequence:

>231_bases
ATGTCAGGCATGGTTACCACCGGTGTCGCCGCATTGAGCGACTACGACAACCGCACCGTGGTCATCGAGGTGACCGGGAT
GCGCCAGGACCGCATGCGCCGCAGCAACACGACTTTTAAGGTCCCCCACGCGCGCATGTCCCAGACGATGCAGCTCATCA
ACCGCATGGGCGGCAAAGTCGTGGGGGTCACCTTGCCGGGCGGCAACGGCGGCGAGGCTGAGACCCCCTAG

Upstream 100 bases:

>100_bases
AGCAGGTGCAGAATATTCACAAGGCCGGCGGCCGGATCGTCGCCATCAGCGAAGTTGCCTGATTCCGTCCAACTGTTCTT
GCATTCAAGGAGTCCTTTCC

Downstream 100 bases:

>100_bases
AAAGCAAAGTGCCATAGCCCGACGCCGCGCCGGTTCGCCGCGCGCGGCTGTCGGGTATCTTGATAGACAGACCACGCACC
AGGGAGAACCGCCCCGATGT

Product: phycobilisome 8.9 KD linker polypeptide, phycocyanin-associated, rod (rod capping linker protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MSGMVTTGVAALSDYDNRTVVIEVTGMRQDRMRRSNTTFKVPHARMSQTMQLINRMGGKVVGVTLPGGNGGEAETP

Sequences:

>Translated_76_residues
MSGMVTTGVAALSDYDNRTVVIEVTGMRQDRMRRSNTTFKVPHARMSQTMQLINRMGGKVVGVTLPGGNGGEAETP
>Mature_75_residues
SGMVTTGVAALSDYDNRTVVIEVTGMRQDRMRRSNTTFKVPHARMSQTMQLINRMGGKVVGVTLPGGNGGEAETP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8170; Mature: 8038

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.2 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGMVTTGVAALSDYDNRTVVIEVTGMRQDRMRRSNTTFKVPHARMSQTMQLINRMGGKV
CCCCCCCCHHEECCCCCCEEEEEECCCCHHHHHCCCCEEECCHHHHHHHHHHHHHCCCEE
VGVTLPGGNGGEAETP
EEEEECCCCCCCCCCC
>Mature Secondary Structure 
SGMVTTGVAALSDYDNRTVVIEVTGMRQDRMRRSNTTFKVPHARMSQTMQLINRMGGKV
CCCCCCCHHEECCCCCCEEEEEECCCCHHHHHCCCCEEECCHHHHHHHHHHHHHCCCEE
VGVTLPGGNGGEAETP
EEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA