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The map label for this gene is yedY [H]

Identifier: 37520722

GI number: 37520722

Start: 1231633

End: 1232379

Strand: Reverse

Name: yedY [H]

Synonym: gll1153

Alternate gene names: 37520722

Gene position: 1232379-1231633 (Counterclockwise)

Preceding gene: 37520723

Following gene: 37520719

Centisome position: 26.45

GC content: 60.64

Gene sequence:

>747_bases
ATGAGCGATTTTCTTCGAATCGGACGGCGCAGGCTCATCGGCCTGGGCGGCATGAGTTTGCTGCTGGCTGCCTGTGGGCG
CGGTTCGGTGCAAACCCAGATCGAACAAAAACTCTTCGAGCTTTCGGACCCACTCAACCGCAGCTTCGAGCAACTGCTGT
TCAGCTCCCAGCGCCTCGCGCCGGAGTTCCGGCGCGAGGAGATCGAGCCCGAGGCGCTGCTGATCAACACCGCCGAGGAT
TTCCCGCCCCAGATCGACCCGGGCTCCTACCGCCTCACCGTGGGCGGCCTGGTGGAAAAACCTGTGAGCTTGACTCTGAA
GGAGATCCGCAAGTTGCCCTACCGCTCCGAAATCATCCGCCACGTCTGCGTCGAGGGGTGGGCGGCCATCGTCCAGTGGG
GCGGCCTGCCGCTGGTGGAGTTGCTCAAATTCGTGCAGCCCAAGCCCGAGGCGCGCTATGTGTTTTTTCGATCGGCGGAA
GGTTTTCGCAACAACAACGGCGAACTGTACGGTTTCTACGAGACCTGGGATCTGGCAAGTTGCGTCCATCCCCAGACGGT
GATGGCCTACGAAAAAAATTTCAAGCCGCTGCCGGTGATCAATGGGGCTCCCGTGCGCCTCGCCTCGCCCATCAAGCTCG
GTTACAAGCAGATCAAATGGGTAACCGAGATCATGCTGCTGGCGGCACTGCCGGAGCAGCTGGGTTACTGGGTGGATTTC
GGGTATGAGTGGTACGGCGGGATCTAA

Upstream 100 bases:

>100_bases
ATTCCGACGGTGCTGGGGCTGATGGCGGTCCACTCGCTACTCGCTCTCAACGTTGGGCAATGGAAACTGGTGCGCTCGAT
GTTTACTTGAGGCACATACG

Downstream 100 bases:

>100_bases
AGGCTGCCAGCCTCCACGATGGTCTTGTCGAGCCATTGGGTGAGCCGGGCGAATCGCGGGCACCGCGCTGCCACACGTTC
CGGACGGATCTTTCTCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSDFLRIGRRRLIGLGGMSLLLAACGRGSVQTQIEQKLFELSDPLNRSFEQLLFSSQRLAPEFRREEIEPEALLINTAED
FPPQIDPGSYRLTVGGLVEKPVSLTLKEIRKLPYRSEIIRHVCVEGWAAIVQWGGLPLVELLKFVQPKPEARYVFFRSAE
GFRNNNGELYGFYETWDLASCVHPQTVMAYEKNFKPLPVINGAPVRLASPIKLGYKQIKWVTEIMLLAALPEQLGYWVDF
GYEWYGGI

Sequences:

>Translated_248_residues
MSDFLRIGRRRLIGLGGMSLLLAACGRGSVQTQIEQKLFELSDPLNRSFEQLLFSSQRLAPEFRREEIEPEALLINTAED
FPPQIDPGSYRLTVGGLVEKPVSLTLKEIRKLPYRSEIIRHVCVEGWAAIVQWGGLPLVELLKFVQPKPEARYVFFRSAE
GFRNNNGELYGFYETWDLASCVHPQTVMAYEKNFKPLPVINGAPVRLASPIKLGYKQIKWVTEIMLLAALPEQLGYWVDF
GYEWYGGI
>Mature_247_residues
SDFLRIGRRRLIGLGGMSLLLAACGRGSVQTQIEQKLFELSDPLNRSFEQLLFSSQRLAPEFRREEIEPEALLINTAEDF
PPQIDPGSYRLTVGGLVEKPVSLTLKEIRKLPYRSEIIRHVCVEGWAAIVQWGGLPLVELLKFVQPKPEARYVFFRSAEG
FRNNNGELYGFYETWDLASCVHPQTVMAYEKNFKPLPVINGAPVRLASPIKLGYKQIKWVTEIMLLAALPEQLGYWVDFG
YEWYGGI

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=175, Percent_Identity=32.5714285714286, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 28253; Mature: 28122

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFLRIGRRRLIGLGGMSLLLAACGRGSVQTQIEQKLFELSDPLNRSFEQLLFSSQRLA
CCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PEFRREEIEPEALLINTAEDFPPQIDPGSYRLTVGGLVEKPVSLTLKEIRKLPYRSEIIR
HHHHHHCCCCCEEEEECHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHCCCCHHHHHH
HVCVEGWAAIVQWGGLPLVELLKFVQPKPEARYVFFRSAEGFRNNNGELYGFYETWDLAS
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHH
CVHPQTVMAYEKNFKPLPVINGAPVRLASPIKLGYKQIKWVTEIMLLAALPEQLGYWVDF
HCCCHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCC
GYEWYGGI
CCHHCCCC
>Mature Secondary Structure 
SDFLRIGRRRLIGLGGMSLLLAACGRGSVQTQIEQKLFELSDPLNRSFEQLLFSSQRLA
CHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PEFRREEIEPEALLINTAEDFPPQIDPGSYRLTVGGLVEKPVSLTLKEIRKLPYRSEIIR
HHHHHHCCCCCEEEEECHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHCCCCHHHHHH
HVCVEGWAAIVQWGGLPLVELLKFVQPKPEARYVFFRSAEGFRNNNGELYGFYETWDLAS
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECHHHHH
CVHPQTVMAYEKNFKPLPVINGAPVRLASPIKLGYKQIKWVTEIMLLAALPEQLGYWVDF
HCCCHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCC
GYEWYGGI
CCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]