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The map label for this gene is rlpA [C]

Identifier: 37520717

GI number: 37520717

Start: 1226346

End: 1227401

Strand: Direct

Name: rlpA [C]

Synonym: glr1148

Alternate gene names: 37520717

Gene position: 1226346-1227401 (Clockwise)

Preceding gene: 37520715

Following gene: 37520718

Centisome position: 26.32

GC content: 62.97

Gene sequence:

>1056_bases
GTGCGAACTTATTCGAGGTTAATTGCCCTCTCGATAGGGGCTGTCAAGCCCCCAAAAACCTTTGCTCAAGCAGATTTAAT
TGTTCGCCGGCTCAGACCTGTGGTATGGTTTCCCAGACGAAACAGTGAGAAGTCCGCAATGGTCAACTCCATCCGAGACC
TCATTGTTGCGCTATCTTGCGTGGCAATGCTCAACGTCGCTGCGGCAAGCGCCCAGGTCCGCACGGTCCAGGATCTTCCG
GTGGCGGGTGGATGGCTCAAATCGATGCAACAGAGCCTCCAGCAACCGGCCGGCACCCCAACTCCCGATCAACTCCCGCT
GAAGATGGGCGGGGCGGTTCCCCCTGCCACCCGTGCCGCCGCCCGCATTCAGGACATGCCCGAGTACCAGACCACCGTCG
TCTACCTGGGCGATCTGCCCTTGCTCTCCGTGGCGACGGCCGAGGAACCGGCGATCTTGCGGGCCAGCTTGATCAGCTCT
CGAGTCAACCAGTTGCAATGGGATCAAATTCCCGGCGAGTCGATTCGCATCACCCACGACGGCAAGTCCTACTCGCTGGT
CGCCGGTAAGGACCAGACACTGATCACCATCGACCGGAGCATTCGTCTGAGCCGCACCGAGGCGATTTCCGACAAAGCGG
CGGCTCTGCAAATCGCCAACCGCCTGCGCCGCTACTTCGGCAACGCGCCGGAACTGACCGACGCCCCGCCCGAGCCACCC
TCGTTGATCGCCGCGATCAGCGTCTCGATCAGCGACACGGTCGTGCATGTCTTCCAGGGGGTCGCCTCCTGGTATGGCCA
CACATTTTTGAACCGGCGCACCTCCAGCGGTACGGTACTGCGCGAGGACAGCCTGATTGCCGCCCACCCCGCCTTGCCCT
TCGGCACCCAGCTGCGGGTCACCAACCTCGGCAACGGCCGGCAGGTGACCGTCAAGGTCCAAGATCGCGGGCCATTTATC
CGGGGGCGGGTGATCGACCTGTCGCCGCGGGCCGCCCAGCTGCTCGGCATGGTCAGCTCCGGCCTCGCCCGGGTCAAAGT
CGAAGTGATCCGCTAG

Upstream 100 bases:

>100_bases
AAATTACCCAAAGGCCTTGTGCTGCTTCTGTCTGCGCGGAATGGCGGGTGTAGATTGCAACTGCTGATCGGCGATACTTT
CCCGAGGATTAGTTGCGGCG

Downstream 100 bases:

>100_bases
CGCCCGCCGGCGTTCCATTGCCCACCGGGCGGCAGGCCGATGGCTGCAGGCTATGCTTGTGCTCATGAGCGCGACAGGCC
CAAAAAACCGCTGGACGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MRTYSRLIALSIGAVKPPKTFAQADLIVRRLRPVVWFPRRNSEKSAMVNSIRDLIVALSCVAMLNVAAASAQVRTVQDLP
VAGGWLKSMQQSLQQPAGTPTPDQLPLKMGGAVPPATRAAARIQDMPEYQTTVVYLGDLPLLSVATAEEPAILRASLISS
RVNQLQWDQIPGESIRITHDGKSYSLVAGKDQTLITIDRSIRLSRTEAISDKAAALQIANRLRRYFGNAPELTDAPPEPP
SLIAAISVSISDTVVHVFQGVASWYGHTFLNRRTSSGTVLREDSLIAAHPALPFGTQLRVTNLGNGRQVTVKVQDRGPFI
RGRVIDLSPRAAQLLGMVSSGLARVKVEVIR

Sequences:

>Translated_351_residues
MRTYSRLIALSIGAVKPPKTFAQADLIVRRLRPVVWFPRRNSEKSAMVNSIRDLIVALSCVAMLNVAAASAQVRTVQDLP
VAGGWLKSMQQSLQQPAGTPTPDQLPLKMGGAVPPATRAAARIQDMPEYQTTVVYLGDLPLLSVATAEEPAILRASLISS
RVNQLQWDQIPGESIRITHDGKSYSLVAGKDQTLITIDRSIRLSRTEAISDKAAALQIANRLRRYFGNAPELTDAPPEPP
SLIAAISVSISDTVVHVFQGVASWYGHTFLNRRTSSGTVLREDSLIAAHPALPFGTQLRVTNLGNGRQVTVKVQDRGPFI
RGRVIDLSPRAAQLLGMVSSGLARVKVEVIR
>Mature_351_residues
MRTYSRLIALSIGAVKPPKTFAQADLIVRRLRPVVWFPRRNSEKSAMVNSIRDLIVALSCVAMLNVAAASAQVRTVQDLP
VAGGWLKSMQQSLQQPAGTPTPDQLPLKMGGAVPPATRAAARIQDMPEYQTTVVYLGDLPLLSVATAEEPAILRASLISS
RVNQLQWDQIPGESIRITHDGKSYSLVAGKDQTLITIDRSIRLSRTEAISDKAAALQIANRLRRYFGNAPELTDAPPEPP
SLIAAISVSISDTVVHVFQGVASWYGHTFLNRRTSSGTVLREDSLIAAHPALPFGTQLRVTNLGNGRQVTVKVQDRGPFI
RGRVIDLSPRAAQLLGMVSSGLARVKVEVIR

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=91, Percent_Identity=39.5604395604396, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997 [H]

Pfam domain/function: PF03330 DPBB_1 [H]

EC number: NA

Molecular weight: Translated: 38074; Mature: 38074

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTYSRLIALSIGAVKPPKTFAQADLIVRRLRPVVWFPRRNSEKSAMVNSIRDLIVALSC
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHH
VAMLNVAAASAQVRTVQDLPVAGGWLKSMQQSLQQPAGTPTPDQLPLKMGGAVPPATRAA
HHHHHHHHHHHHHEEHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCHHHHH
ARIQDMPEYQTTVVYLGDLPLLSVATAEEPAILRASLISSRVNQLQWDQIPGESIRITHD
HHHHCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
GKSYSLVAGKDQTLITIDRSIRLSRTEAISDKAAALQIANRLRRYFGNAPELTDAPPEPP
CCEEEEEECCCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SLIAAISVSISDTVVHVFQGVASWYGHTFLNRRTSSGTVLREDSLIAAHPALPFGTQLRV
CEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEECCCCCCCCEEEE
TNLGNGRQVTVKVQDRGPFIRGRVIDLSPRAAQLLGMVSSGLARVKVEVIR
EECCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHCCCEEEEEEEEC
>Mature Secondary Structure
MRTYSRLIALSIGAVKPPKTFAQADLIVRRLRPVVWFPRRNSEKSAMVNSIRDLIVALSC
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHH
VAMLNVAAASAQVRTVQDLPVAGGWLKSMQQSLQQPAGTPTPDQLPLKMGGAVPPATRAA
HHHHHHHHHHHHHEEHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCHHHHH
ARIQDMPEYQTTVVYLGDLPLLSVATAEEPAILRASLISSRVNQLQWDQIPGESIRITHD
HHHHCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
GKSYSLVAGKDQTLITIDRSIRLSRTEAISDKAAALQIANRLRRYFGNAPELTDAPPEPP
CCEEEEEECCCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
SLIAAISVSISDTVVHVFQGVASWYGHTFLNRRTSSGTVLREDSLIAAHPALPFGTQLRV
CEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEECCCCCCCCEEEE
TNLGNGRQVTVKVQDRGPFIRGRVIDLSPRAAQLLGMVSSGLARVKVEVIR
EECCCCCEEEEEEECCCCEEEEEEEECCHHHHHHHHHHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]