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The map label for this gene is 37520677

Identifier: 37520677

GI number: 37520677

Start: 1187007

End: 1187726

Strand: Direct

Name: 37520677

Synonym: glr1108

Alternate gene names: NA

Gene position: 1187007-1187726 (Clockwise)

Preceding gene: 37520675

Following gene: 37520684

Centisome position: 25.48

GC content: 60.56

Gene sequence:

>720_bases
GTGGTCGGGGACCGGTGGGTCGAAGTCATTCGCGTCGCGTCGCGGTATTACCAGTGGAATCCCACAACCCGGCTGTCCTT
CGCGCGCGTGTCGTTCGGTGAATTTCGCGACCGGATCGCCTCGGAGCACTTCGATGGGCCAAGGGTGTACCTGCAGGACG
ACGTCAACAACTTTCCCGCTCTAAAAGCGTACTACCGCGAACCGCAATACCTGGCAAGGCACAACCTGAAGCGCACAAAG
CTCTGGGTGAGCGGCGCCGGGCTGGTTACTCCCCTGCACTTCGATGCGGTCGAGGTGTTGCACTGGATGATGGAAGGCCG
CAAGCGCTTTGTCTGCTTTCACCCTGGGCTCAGGAACTTCTATCCCCACGGCATCCTGAGCACGGGTCCTTTCAACAGCC
AAGTCAACGCCGACGCCCCCGATTTGCGGGCGTTCCCCCGCTTTCGGCGCACCCAACCCATTGAGTTTGTACTCCAGGCC
GGCGAGGTGCTCTACATCCCCGCGTATTACTGGCACCAGGTCGAATCGCTCGATGCTTACAATGCCTCGATGAGCTTTAT
CTGGCTTGCTTCGATGGCCAAGAACCTGCGCTACTTCCGGCAGTTCGGGCGCTGTTCTGGCAGTACCAAAAAGTCCAGCG
GGCCAAGCGCGCCAACGCTCCGGGCTGAGCGAGCCGGTACTCGCAACAAAACCACCAAACGGGCACGGGCCGCTCAATAG

Upstream 100 bases:

>100_bases
GTTCGAAGCGGCGGTCCGACAAAATCGGCTTGTCGTGCTGCGCGGCCTGGGCGAAATTCTGTCCAAGCACAACGCCTACT
CGCTCGATGCGCTCGAAAAG

Downstream 100 bases:

>100_bases
CTTCCAGCCCGTGCCCGTTTGGTGGTTTTAGTTTACTCCTCGGGACTAAAGCCCAGGCTCGCCGGAAAATCGAGGCCATC
CGCCGCCGAGGCCAGGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Factor Jumonji Domain-Containing Protein; JmjC-Domain Protein; Transcription Factor Jumonji Jmjc Domain-Containing Protein; Pass1-Related Protein; Transcription Factor Jumonji/Aspartyl Beta-Hydroxylase; JmjC Domain Protein; JmjC Domain-Containing Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MVGDRWVEVIRVASRYYQWNPTTRLSFARVSFGEFRDRIASEHFDGPRVYLQDDVNNFPALKAYYREPQYLARHNLKRTK
LWVSGAGLVTPLHFDAVEVLHWMMEGRKRFVCFHPGLRNFYPHGILSTGPFNSQVNADAPDLRAFPRFRRTQPIEFVLQA
GEVLYIPAYYWHQVESLDAYNASMSFIWLASMAKNLRYFRQFGRCSGSTKKSSGPSAPTLRAERAGTRNKTTKRARAAQ

Sequences:

>Translated_239_residues
MVGDRWVEVIRVASRYYQWNPTTRLSFARVSFGEFRDRIASEHFDGPRVYLQDDVNNFPALKAYYREPQYLARHNLKRTK
LWVSGAGLVTPLHFDAVEVLHWMMEGRKRFVCFHPGLRNFYPHGILSTGPFNSQVNADAPDLRAFPRFRRTQPIEFVLQA
GEVLYIPAYYWHQVESLDAYNASMSFIWLASMAKNLRYFRQFGRCSGSTKKSSGPSAPTLRAERAGTRNKTTKRARAAQ
>Mature_239_residues
MVGDRWVEVIRVASRYYQWNPTTRLSFARVSFGEFRDRIASEHFDGPRVYLQDDVNNFPALKAYYREPQYLARHNLKRTK
LWVSGAGLVTPLHFDAVEVLHWMMEGRKRFVCFHPGLRNFYPHGILSTGPFNSQVNADAPDLRAFPRFRRTQPIEFVLQA
GEVLYIPAYYWHQVESLDAYNASMSFIWLASMAKNLRYFRQFGRCSGSTKKSSGPSAPTLRAERAGTRNKTTKRARAAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21314714, Length=114, Percent_Identity=35.9649122807018, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI148596936, Length=103, Percent_Identity=36.8932038834951, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI223942018, Length=189, Percent_Identity=29.1005291005291, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI223942014, Length=189, Percent_Identity=29.1005291005291, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI89242134, Length=144, Percent_Identity=28.4722222222222, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27707; Mature: 27707

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGDRWVEVIRVASRYYQWNPTTRLSFARVSFGEFRDRIASEHFDGPRVYLQDDVNNFPA
CCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
LKAYYREPQYLARHNLKRTKLWVSGAGLVTPLHFDAVEVLHWMMEGRKRFVCFHPGLRNF
HHHHHCCHHHHHHCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHC
YPHGILSTGPFNSQVNADAPDLRAFPRFRRTQPIEFVLQAGEVLYIPAYYWHQVESLDAY
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCEEEECHHHHHHHHHHHHH
NASMSFIWLASMAKNLRYFRQFGRCSGSTKKSSGPSAPTLRAERAGTRNKTTKRARAAQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure
MVGDRWVEVIRVASRYYQWNPTTRLSFARVSFGEFRDRIASEHFDGPRVYLQDDVNNFPA
CCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCH
LKAYYREPQYLARHNLKRTKLWVSGAGLVTPLHFDAVEVLHWMMEGRKRFVCFHPGLRNF
HHHHHCCHHHHHHCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHC
YPHGILSTGPFNSQVNADAPDLRAFPRFRRTQPIEFVLQAGEVLYIPAYYWHQVESLDAY
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCEEEECHHHHHHHHHHHHH
NASMSFIWLASMAKNLRYFRQFGRCSGSTKKSSGPSAPTLRAERAGTRNKTTKRARAAQ
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA