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The map label for this gene is cpcS1 [H]

Identifier: 37520593

GI number: 37520593

Start: 1100787

End: 1101374

Strand: Reverse

Name: cpcS1 [H]

Synonym: gll1024

Alternate gene names: 37520593

Gene position: 1101374-1100787 (Counterclockwise)

Preceding gene: 37520594

Following gene: 37520592

Centisome position: 23.64

GC content: 62.07

Gene sequence:

>588_bases
ATGGGCGACAGACGGGCGGGAGGTCTGATCATGACAACAATTGACGAATTTTTTGACGCTTGCCTGGGCAAGTGGTCCAT
CGAGCGCACTTATCACTACCTGGGCGACGCCGAAGGCCGGGTGGAGCGCTCCCACACCAACTACGACATCCGCCCCCTCA
CCACCGACCGCCAGCACAAGGTGCTCGCCGACAACGAACGGCCCACCGATGCGCCGGAACCGCTCTACGGCTTTTATCTG
GCCTTCGATACGGTTTCAGATCGCGGCGAAAAAGTGGCGATGGACCTGAACATCCTCTTCGTGCCGACCCAGATCGAGGA
GGGTGGCTTCCTCGAAGGCGACTATTTGCGCGATCGGGCCTACGAGGAGGCCCGTCCGATGGTGTCCCACTTCCGCTACG
ACCCCGAGCGCGCCGAACTGCGGATGACGACGCGCTACACCCGCGTCGTCTCGGTCGATTCGATCACCCTCGTGCAGCCG
GACCTGCGCATCCGCCAGATCCAGAACTTCCGCCGCCCGCAGTTCGACAGCCTGCCGCTTCGGGAACTGGAACTGGTCGG
TTTCGGCGTCGAGAAGAAAGTCAGCTAA

Upstream 100 bases:

>100_bases
AGAAGACCCTCGCCGACGGTGCGGCCATCTTCCACGCCATTCAGGATGTCTATCTAAACCAGGACGTGACGATCGCCTAG
AGTCTCCCACCCCATCTAAA

Downstream 100 bases:

>100_bases
GCCGGTAGCGTCCGGTTTGTCCCGGGTGCCGGCCGGCCCATGCCTCTAGAATTGGGTGGTGCCCTTCAGAGTGCGGCCGC
CATGCGAGACCGGAAGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MGDRRAGGLIMTTIDEFFDACLGKWSIERTYHYLGDAEGRVERSHTNYDIRPLTTDRQHKVLADNERPTDAPEPLYGFYL
AFDTVSDRGEKVAMDLNILFVPTQIEEGGFLEGDYLRDRAYEEARPMVSHFRYDPERAELRMTTRYTRVVSVDSITLVQP
DLRIRQIQNFRRPQFDSLPLRELELVGFGVEKKVS

Sequences:

>Translated_195_residues
MGDRRAGGLIMTTIDEFFDACLGKWSIERTYHYLGDAEGRVERSHTNYDIRPLTTDRQHKVLADNERPTDAPEPLYGFYL
AFDTVSDRGEKVAMDLNILFVPTQIEEGGFLEGDYLRDRAYEEARPMVSHFRYDPERAELRMTTRYTRVVSVDSITLVQP
DLRIRQIQNFRRPQFDSLPLRELELVGFGVEKKVS
>Mature_194_residues
GDRRAGGLIMTTIDEFFDACLGKWSIERTYHYLGDAEGRVERSHTNYDIRPLTTDRQHKVLADNERPTDAPEPLYGFYLA
FDTVSDRGEKVAMDLNILFVPTQIEEGGFLEGDYLRDRAYEEARPMVSHFRYDPERAELRMTTRYTRVVSVDSITLVQPD
LRIRQIQNFRRPQFDSLPLRELELVGFGVEKKVS

Specific function: Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR018536 [H]

Pfam domain/function: PF09367 CpeS [H]

EC number: NA

Molecular weight: Translated: 22685; Mature: 22554

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDRRAGGLIMTTIDEFFDACLGKWSIERTYHYLGDAEGRVERSHTNYDIRPLTTDRQHK
CCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHCCCCCCCEECCCCCCCEEECCCCCCCC
VLADNERPTDAPEPLYGFYLAFDTVSDRGEKVAMDLNILFVPTQIEEGGFLEGDYLRDRA
EEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHH
YEEARPMVSHFRYDPERAELRMTTRYTRVVSVDSITLVQPDLRIRQIQNFRRPQFDSLPL
HHHHHHHHHHHCCCCCHHEEEEEEEEEEEEEECEEEEECCCHHHHHHHHHCCCCCCCCCH
RELELVGFGVEKKVS
HEEEEEECCCCCCCC
>Mature Secondary Structure 
GDRRAGGLIMTTIDEFFDACLGKWSIERTYHYLGDAEGRVERSHTNYDIRPLTTDRQHK
CCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHCCCCCCCEECCCCCCCEEECCCCCCCC
VLADNERPTDAPEPLYGFYLAFDTVSDRGEKVAMDLNILFVPTQIEEGGFLEGDYLRDRA
EEECCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHH
YEEARPMVSHFRYDPERAELRMTTRYTRVVSVDSITLVQPDLRIRQIQNFRRPQFDSLPL
HHHHHHHHHHHCCCCCHHEEEEEEEEEEEEEECEEEEECCCHHHHHHHHHCCCCCCCCCH
RELELVGFGVEKKVS
HEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA