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The map label for this gene is 37520575

Identifier: 37520575

GI number: 37520575

Start: 1078996

End: 1079400

Strand: Direct

Name: 37520575

Synonym: glr1006

Alternate gene names: NA

Gene position: 1078996-1079400 (Clockwise)

Preceding gene: 37520574

Following gene: 37520576

Centisome position: 23.16

GC content: 63.95

Gene sequence:

>405_bases
ATGCCCGACATTGTCGACATCGCCGTGGGCGCCGGTGCCTTCAAGACCCTGGTGACCGCCGTCCAGGTGGCCGGCCTGGT
TGATACCCTCAAAAGTCCCGGCCCGTTCACTGTGTTTGCCCCCAACGACGAGGCCTTCGCCCAACTGCCCCCGGGTACCG
TCACCTCCCTGGTGCAAAACCCGCCCCAACTGGCGCGCATCCTCTGCTTCCACGTCGTCCCCGGCCGCTACAAACAGGCG
GACTTGGCCAGGGTGGGTTCCCTCAACTCCGTCGAAGGCGCCCCCATCCCCTTTTATTGCGCAGAAGGCGTCTTCGAGGT
CAAAAACGCCACGGTCCTTGCGGCGGACATCGAAGCCGACAACGGCATCATCCACGTCCTGGACCGCGTCATCTTGATGG
GCTAG

Upstream 100 bases:

>100_bases
TTTTTTTGAGATGCAGCTTGACCGCTTCAAGCGGCCCGAGGCGCGCCTGCGCGATATCCAGCACCAGGACTACCGTTAGC
TACCCAAGGAAAACACTCCC

Downstream 100 bases:

>100_bases
GAACATCTGCACACATCGGCTAGGATGAGGCCAAAATGGTCCAGGCCATGGTTATCTCTACCCAGGCGGTCCAGTACCCG
GATTCTGACGGCCAGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MPDIVDIAVGAGAFKTLVTAVQVAGLVDTLKSPGPFTVFAPNDEAFAQLPPGTVTSLVQNPPQLARILCFHVVPGRYKQA
DLARVGSLNSVEGAPIPFYCAEGVFEVKNATVLAADIEADNGIIHVLDRVILMG

Sequences:

>Translated_134_residues
MPDIVDIAVGAGAFKTLVTAVQVAGLVDTLKSPGPFTVFAPNDEAFAQLPPGTVTSLVQNPPQLARILCFHVVPGRYKQA
DLARVGSLNSVEGAPIPFYCAEGVFEVKNATVLAADIEADNGIIHVLDRVILMG
>Mature_133_residues
PDIVDIAVGAGAFKTLVTAVQVAGLVDTLKSPGPFTVFAPNDEAFAQLPPGTVTSLVQNPPQLARILCFHVVPGRYKQAD
LARVGSLNSVEGAPIPFYCAEGVFEVKNATVLAADIEADNGIIHVLDRVILMG

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=131, Percent_Identity=34.3511450381679, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 14040; Mature: 13909

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDIVDIAVGAGAFKTLVTAVQVAGLVDTLKSPGPFTVFAPNDEAFAQLPPGTVTSLVQN
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCHHHHHHHCC
PPQLARILCFHVVPGRYKQADLARVGSLNSVEGAPIPFYCAEGVFEVKNATVLAADIEAD
CHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCEEECCCCEEEEEECCCC
NGIIHVLDRVILMG
CCHHHHHHHHHHCC
>Mature Secondary Structure 
PDIVDIAVGAGAFKTLVTAVQVAGLVDTLKSPGPFTVFAPNDEAFAQLPPGTVTSLVQN
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCHHHHHHHCC
PPQLARILCFHVVPGRYKQADLARVGSLNSVEGAPIPFYCAEGVFEVKNATVLAADIEAD
CHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCEEECCCCEEEEEECCCC
NGIIHVLDRVILMG
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]