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The map label for this gene is blc [H]

Identifier: 37520535

GI number: 37520535

Start: 1027487

End: 1028101

Strand: Direct

Name: blc [H]

Synonym: glr0966

Alternate gene names: 37520535

Gene position: 1027487-1028101 (Clockwise)

Preceding gene: 37520534

Following gene: 37520537

Centisome position: 22.05

GC content: 51.22

Gene sequence:

>615_bases
ATGCTTCGCTTAACAGCCGTGCCGCTTGCGGCAGTACTCGGTCTGATTGGCTGCGCATCCGCCGTTTGGGCAAACGATTC
GCAACCAATTGAGACGGTGGCGGAAGTGGATTTTAACCGGTACGATGGGCGCTGGTACGAGCTTGCCAGAACACCCAATA
TCTTCCAGATTGGTTGCACTTGCGTGACGGCAAATTATTCCGTGCTCTCCGAATCGTCGATCAGCGTATTCAATACTTGT
AACCGCTTTCGGCCCCGGGGCAATCTTGTTACTATCGACGGCGTTGCAGTCGTTGCCGATCCCAATGCCCCGGGAAAATT
GCTGATTACGTTTGAAGGCTCTCCCGTGGCTGAGGATTACTGGATCATAGATCTAGTGGAAGATCCTAACAATTCGGCGG
GAGACTATGCTTTTGCTGCCATCGGAGGCCCGAATCGAGACTTTATCTTTATCATTTCCAGAAAACCTGCCCTGGAAACC
TACCAGGATGTCCTTGCGTACCAAGGAATTGTGAAGAGATTGCAAGCGCAACATTTTCCTGTCGACGCTTTAAACAGCAC
CCCCCAACCAACCAGTTGCACATATAAATCGCAATCCTTGCCAGGCGGACTCTAA

Upstream 100 bases:

>100_bases
CGACCTTTCACGATCAGTTTGAAGGGAATTGCGCCATCATTCGCCGAACGTTGTTGTTCATGTTGTTCGTACTTTTTACA
GAGTATTAAGGAGTTTGGTT

Downstream 100 bases:

>100_bases
GCCCGCCACAAGCCTTCACGCAAAATAAGCCGGGTGCTGTGCCTCTTACATACAGGCAGCACCCTGGCCGTGCAGGCAGG
CTCAGCCCGCGCGCAAAGCC

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLRLTAVPLAAVLGLIGCASAVWANDSQPIETVAEVDFNRYDGRWYELARTPNIFQIGCTCVTANYSVLSESSISVFNTC
NRFRPRGNLVTIDGVAVVADPNAPGKLLITFEGSPVAEDYWIIDLVEDPNNSAGDYAFAAIGGPNRDFIFIISRKPALET
YQDVLAYQGIVKRLQAQHFPVDALNSTPQPTSCTYKSQSLPGGL

Sequences:

>Translated_204_residues
MLRLTAVPLAAVLGLIGCASAVWANDSQPIETVAEVDFNRYDGRWYELARTPNIFQIGCTCVTANYSVLSESSISVFNTC
NRFRPRGNLVTIDGVAVVADPNAPGKLLITFEGSPVAEDYWIIDLVEDPNNSAGDYAFAAIGGPNRDFIFIISRKPALET
YQDVLAYQGIVKRLQAQHFPVDALNSTPQPTSCTYKSQSLPGGL
>Mature_204_residues
MLRLTAVPLAAVLGLIGCASAVWANDSQPIETVAEVDFNRYDGRWYELARTPNIFQIGCTCVTANYSVLSESSISVFNTC
NRFRPRGNLVTIDGVAVVADPNAPGKLLITFEGSPVAEDYWIIDLVEDPNNSAGDYAFAAIGGPNRDFIFIISRKPALET
YQDVLAYQGIVKRLQAQHFPVDALNSTPQPTSCTYKSQSLPGGL

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=145, Percent_Identity=32.4137931034483, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 22150; Mature: 22150

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLTAVPLAAVLGLIGCASAVWANDSQPIETVAEVDFNRYDGRWYELARTPNIFQIGCT
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCEEEEEEE
CVTANYSVLSESSISVFNTCNRFRPRGNLVTIDGVAVVADPNAPGKLLITFEGSPVAEDY
EEECCCEEECCCCHHHHHHHHHCCCCCCEEEECCEEEEECCCCCCEEEEEECCCCCCCCE
WIIDLVEDPNNSAGDYAFAAIGGPNRDFIFIISRKPALETYQDVLAYQGIVKRLQAQHFP
EEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
VDALNSTPQPTSCTYKSQSLPGGL
CHHCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MLRLTAVPLAAVLGLIGCASAVWANDSQPIETVAEVDFNRYDGRWYELARTPNIFQIGCT
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCEEEEEEE
CVTANYSVLSESSISVFNTCNRFRPRGNLVTIDGVAVVADPNAPGKLLITFEGSPVAEDY
EEECCCEEECCCCHHHHHHHHHCCCCCCEEEECCEEEEECCCCCCEEEEEECCCCCCCCE
WIIDLVEDPNNSAGDYAFAAIGGPNRDFIFIISRKPALETYQDVLAYQGIVKRLQAQHFP
EEEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
VDALNSTPQPTSCTYKSQSLPGGL
CHHCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]