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The map label for this gene is ydcP [H]

Identifier: 37520507

GI number: 37520507

Start: 993587

End: 996034

Strand: Reverse

Name: ydcP [H]

Synonym: gll0938

Alternate gene names: 37520507

Gene position: 996034-993587 (Counterclockwise)

Preceding gene: 37520510

Following gene: 37520506

Centisome position: 21.38

GC content: 65.56

Gene sequence:

>2448_bases
ATGGCGTGGCGGTGTCCGGAGCTGTTGGCCCCGGCGGGCGATTGGGAGTGCGCCCGGGCGGCGGTCGAAAACGGCGCCGA
TGCCGTCTACTTTGGGCTGGAGCGCTTCAACGCCCGCCTGCGTGCCCACAACTTCACCGAAGCCGATTTGCCGGAGTTGA
TGGCGTACCTGCACAGCCGCGGCGTGCGGGGCTACGTCACCTTCAACACCCTCGTCTTTGCGGATGAGCTGGCCAGTGCC
GAGCGCAGCCTGCGGGCGATCGTGGCGGCCGGGGTGGACGCGGCCATCGTTCAGGACATCGGCGTGTGTCGATTGATCCG
CCAAATCTCGCCGGATTTTGCGATCCACGCTTCCACCCAGATGACCGTCACTAGCGCGGCAGGAGTGGATTTTGTGCGCG
AACTGGGTTGCGCCCTGGTGGTGCTCGCCCGCGAATGTTCGCTCGCCGAGATTGCCAAAATTCGCACGGCTACCGCCGAG
CGGCCTTTGCCGCTGGAGATCTTTGTGCACGGGGCGCTGTGTGTGGCCTACTCGGGGCAGTGCCTCACCAGCGAGGCGCT
CGGGGGCCGCTCGGCCAACCGCGGCGAGTGCGCCCAGGCCTGCCGTTTGCCCTACGAACTGGTCGCAGACGGTGAACGGG
TGGACCTGGGGGAGCGCGCCTACCTGCTGAGCCCCCAGGATCTAGCCGGGATTGACCTGATCCCCGAGCTGCTGCCAGCC
GGGCTTGCCTCGCTCAAGATCGAAGGCCGGCTCAAATCTCCCGAGTATGTGGCCAGTGTCACCCGTGTCTACCGCCAGGC
CCTCGACCGGGCGGCGGCTGAGCTAGAAAAGACCGGCCCTGTCGATCCCGCATCCTACTACGCACTGGAGATGGCTTTTT
CGCGGGGTCTCTCCACCGGTTGGCTTGAGGGCATCGACAACCAGCGGTTGGTCCACGCCCGCTATGGCAAGAAGCGGGGC
GTCTACCTGGGCGAAGTGCTGCGGGTGCAAGAAGGCACAGTCGAACTGGTACTCGAAGCGCCCCTCAAACCGGGGGACGG
CGTCGTCTTCGACGGCGGCAGGCCCGACGAACCCGAGCAGGGGGGCCGGGTCTACATGGTCGAAATGCACCACTCACTCG
CCCGCGTCGGTTTTGGTCGGGGCGACATTCGTTGGCGGCGGGTGCAGCCGGGGGACAAGCTCTGGAAGACCAGCGATCCC
GAACTGGAGCGCCGGGTGCGCCGGAGCTTTGCACCCGGGGCGGCGCCTTTTCAGCGGCCTGTACACCTTCAGGTGTCCGG
CCGGCCGGGCGAAGCACTCGTCCTCGAAGCCCAGGACGAATCCGGTCGCCTGGTGCGGGTACAATCGTCGCTGCCCCTGG
CTGAAGCCCACAAACACACCCTCGACACCGAGCGGCTGGCGGAACAGTTGGGGCGCCTGGGGGGAACCCCCTTTAAGCTG
GGTGCCCTCGACAACCACATCGAAGGTGCCGTCCATCTGCCGGTGAGCGAACTGAACCGGCTGCGCCGCGAGGTGGTGGA
GCGATTGATCGCCCTGCGCGCCGAGCCCTTGCGCTGGCAGAGCCACCCGACCCCGGCGGCCCCGCGTGTCAATGGCGAGG
CACCGACCCTTGCCGAGCCGGAACTGATCGCGCTGGTGCGTTCGTTTGCCCAACTCGACGCGGTGCTGGATAGCGGTCTG
CGCACGGTTTATTGCGAATTGGAGGATGTGCGGCAGTATCGCCGGGCGGTGGAGCGCGCCCGCGCCGCGGGGGCCACCCT
CTTTGTCGCCCCGCCGCGCATCGCCAAGATGGGCGAAGAGTGGATCTTGAGCCAGGTGAGGGCGAGCGGTGCGGACGGCT
ACCTGGTGCGCAACTACGATCACCTGCATTACTTCGCCTCCGAACGCTGCGTCGGCGATTTCTCTTTGAACGTCGCCAAC
CCGCTTGCCGCCAAGTACCTCAAAGAGCGCTACGCCCTCGAACGGCTTACCGCGAGTTACGACCTCAATGTCGCCCAGCT
TTCGGCACTGCTGGCCGGTGCCCCGCCCGCCTGGTTTGAGATCACCATCCACCAGCACATGCCGTTGTTCCACATGGAGC
ACTGTGTCTTTTGCGCTTTTTTATCCGAAGGCACCGATCACACCAACTGCGGCCGTCCCTGCGAGCGGGTCGAAGTGCAA
CTGCGCGATCGCGTCGGCTCGGCGCACCCCCTGAAAGCGGACGCCGGTTGCCGCAACACGCTCTTTAACGCTAGAGCCCA
GAGCGCAGCGGAGTACGTGCAGCATCTGGTCGGATTGGGGGCGCGTTATTTGCGGGTGGAATTTCTTAACGACCCCCCCG
AGCGGGTGGGCACCGTCCTCGACAGCTACCGCAAGCTTTTGGCGGGCCAGATGAGCGGCAGCGAGTTGTGGCGGGAATTA
AAACTTTTCAACCAGTTGGGTGTCACCCGCGGCCAGTTGCCTTATTGA

Upstream 100 bases:

>100_bases
GATATACTACGCCTCTGCCGCCCGGGTCAAGCCCTCGCAGCGGATTGCTGCGGACTTGGGACCGCTAAGATTAGGAAAGA
TTTTTTGTGGTGGAGAAGCG

Downstream 100 bases:

>100_bases
GTATTCTTTGCCACCGCTTTTCAATATAGCGGTGAGCTAAAATACACGGCCAAAGTTTGAGACCGTATATTCTCATCGGT
GATAGCCGCCTCCGGTTCTC

Product: proteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 815; Mature: 814

Protein sequence:

>815_residues
MAWRCPELLAPAGDWECARAAVENGADAVYFGLERFNARLRAHNFTEADLPELMAYLHSRGVRGYVTFNTLVFADELASA
ERSLRAIVAAGVDAAIVQDIGVCRLIRQISPDFAIHASTQMTVTSAAGVDFVRELGCALVVLARECSLAEIAKIRTATAE
RPLPLEIFVHGALCVAYSGQCLTSEALGGRSANRGECAQACRLPYELVADGERVDLGERAYLLSPQDLAGIDLIPELLPA
GLASLKIEGRLKSPEYVASVTRVYRQALDRAAAELEKTGPVDPASYYALEMAFSRGLSTGWLEGIDNQRLVHARYGKKRG
VYLGEVLRVQEGTVELVLEAPLKPGDGVVFDGGRPDEPEQGGRVYMVEMHHSLARVGFGRGDIRWRRVQPGDKLWKTSDP
ELERRVRRSFAPGAAPFQRPVHLQVSGRPGEALVLEAQDESGRLVRVQSSLPLAEAHKHTLDTERLAEQLGRLGGTPFKL
GALDNHIEGAVHLPVSELNRLRREVVERLIALRAEPLRWQSHPTPAAPRVNGEAPTLAEPELIALVRSFAQLDAVLDSGL
RTVYCELEDVRQYRRAVERARAAGATLFVAPPRIAKMGEEWILSQVRASGADGYLVRNYDHLHYFASERCVGDFSLNVAN
PLAAKYLKERYALERLTASYDLNVAQLSALLAGAPPAWFEITIHQHMPLFHMEHCVFCAFLSEGTDHTNCGRPCERVEVQ
LRDRVGSAHPLKADAGCRNTLFNARAQSAAEYVQHLVGLGARYLRVEFLNDPPERVGTVLDSYRKLLAGQMSGSELWREL
KLFNQLGVTRGQLPY

Sequences:

>Translated_815_residues
MAWRCPELLAPAGDWECARAAVENGADAVYFGLERFNARLRAHNFTEADLPELMAYLHSRGVRGYVTFNTLVFADELASA
ERSLRAIVAAGVDAAIVQDIGVCRLIRQISPDFAIHASTQMTVTSAAGVDFVRELGCALVVLARECSLAEIAKIRTATAE
RPLPLEIFVHGALCVAYSGQCLTSEALGGRSANRGECAQACRLPYELVADGERVDLGERAYLLSPQDLAGIDLIPELLPA
GLASLKIEGRLKSPEYVASVTRVYRQALDRAAAELEKTGPVDPASYYALEMAFSRGLSTGWLEGIDNQRLVHARYGKKRG
VYLGEVLRVQEGTVELVLEAPLKPGDGVVFDGGRPDEPEQGGRVYMVEMHHSLARVGFGRGDIRWRRVQPGDKLWKTSDP
ELERRVRRSFAPGAAPFQRPVHLQVSGRPGEALVLEAQDESGRLVRVQSSLPLAEAHKHTLDTERLAEQLGRLGGTPFKL
GALDNHIEGAVHLPVSELNRLRREVVERLIALRAEPLRWQSHPTPAAPRVNGEAPTLAEPELIALVRSFAQLDAVLDSGL
RTVYCELEDVRQYRRAVERARAAGATLFVAPPRIAKMGEEWILSQVRASGADGYLVRNYDHLHYFASERCVGDFSLNVAN
PLAAKYLKERYALERLTASYDLNVAQLSALLAGAPPAWFEITIHQHMPLFHMEHCVFCAFLSEGTDHTNCGRPCERVEVQ
LRDRVGSAHPLKADAGCRNTLFNARAQSAAEYVQHLVGLGARYLRVEFLNDPPERVGTVLDSYRKLLAGQMSGSELWREL
KLFNQLGVTRGQLPY
>Mature_814_residues
AWRCPELLAPAGDWECARAAVENGADAVYFGLERFNARLRAHNFTEADLPELMAYLHSRGVRGYVTFNTLVFADELASAE
RSLRAIVAAGVDAAIVQDIGVCRLIRQISPDFAIHASTQMTVTSAAGVDFVRELGCALVVLARECSLAEIAKIRTATAER
PLPLEIFVHGALCVAYSGQCLTSEALGGRSANRGECAQACRLPYELVADGERVDLGERAYLLSPQDLAGIDLIPELLPAG
LASLKIEGRLKSPEYVASVTRVYRQALDRAAAELEKTGPVDPASYYALEMAFSRGLSTGWLEGIDNQRLVHARYGKKRGV
YLGEVLRVQEGTVELVLEAPLKPGDGVVFDGGRPDEPEQGGRVYMVEMHHSLARVGFGRGDIRWRRVQPGDKLWKTSDPE
LERRVRRSFAPGAAPFQRPVHLQVSGRPGEALVLEAQDESGRLVRVQSSLPLAEAHKHTLDTERLAEQLGRLGGTPFKLG
ALDNHIEGAVHLPVSELNRLRREVVERLIALRAEPLRWQSHPTPAAPRVNGEAPTLAEPELIALVRSFAQLDAVLDSGLR
TVYCELEDVRQYRRAVERARAAGATLFVAPPRIAKMGEEWILSQVRASGADGYLVRNYDHLHYFASERCVGDFSLNVANP
LAAKYLKERYALERLTASYDLNVAQLSALLAGAPPAWFEITIHQHMPLFHMEHCVFCAFLSEGTDHTNCGRPCERVEVQL
RDRVGSAHPLKADAGCRNTLFNARAQSAAEYVQHLVGLGARYLRVEFLNDPPERVGTVLDSYRKLLAGQMSGSELWRELK
LFNQLGVTRGQLPY

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=572, Percent_Identity=34.965034965035, Blast_Score=238, Evalue=1e-63,
Organism=Escherichia coli, GI1788397, Length=381, Percent_Identity=32.8083989501312, Blast_Score=168, Evalue=1e-42,
Organism=Escherichia coli, GI1789548, Length=307, Percent_Identity=35.8306188925081, Blast_Score=156, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020988
- InterPro:   IPR001539 [H]

Pfam domain/function: PF12392 DUF3656; PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 89827; Mature: 89695

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWRCPELLAPAGDWECARAAVENGADAVYFGLERFNARLRAHNFTEADLPELMAYLHSR
CCCCCCHHHCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHC
GVRGYVTFNTLVFADELASAERSLRAIVAAGVDAAIVQDIGVCRLIRQISPDFAIHASTQ
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEECCCE
MTVTSAAGVDFVRELGCALVVLARECSLAEIAKIRTATAERPLPLEIFVHGALCVAYSGQ
EEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEHEEEEEECCC
CLTSEALGGRSANRGECAQACRLPYELVADGERVDLGERAYLLSPQDLAGIDLIPELLPA
EEEHHHCCCCCCCCHHHHHHHCCCHHHHCCCCEECCCCCEEEECCCCCCCHHHHHHHHHC
GLASLKIEGRLKSPEYVASVTRVYRQALDRAAAELEKTGPVDPASYYALEMAFSRGLSTG
CHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCH
WLEGIDNQRLVHARYGKKRGVYLGEVLRVQEGTVELVLEAPLKPGDGVVFDGGRPDEPEQ
HHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCC
GGRVYMVEMHHSLARVGFGRGDIRWRRVQPGDKLWKTSDPELERRVRRSFAPGAAPFQRP
CCEEEEEEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
VHLQVSGRPGEALVLEAQDESGRLVRVQSSLPLAEAHKHTLDTERLAEQLGRLGGTPFKL
EEEEECCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEE
GALDNHIEGAVHLPVSELNRLRREVVERLIALRAEPLRWQSHPTPAAPRVNGEAPTLAEP
CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ELIALVRSFAQLDAVLDSGLRTVYCELEDVRQYRRAVERARAAGATLFVAPPRIAKMGEE
HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCHH
WILSQVRASGADGYLVRNYDHLHYFASERCVGDFSLNVANPLAAKYLKERYALERLTASY
HHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHC
DLNVAQLSALLAGAPPAWFEITIHQHMPLFHMEHCVFCAFLSEGTDHTNCGRPCERVEVQ
CCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LRDRVGSAHPLKADAGCRNTLFNARAQSAAEYVQHLVGLGARYLRVEFLNDPPERVGTVL
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHH
DSYRKLLAGQMSGSELWRELKLFNQLGVTRGQLPY
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AWRCPELLAPAGDWECARAAVENGADAVYFGLERFNARLRAHNFTEADLPELMAYLHSR
CCCCCHHHCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHC
GVRGYVTFNTLVFADELASAERSLRAIVAAGVDAAIVQDIGVCRLIRQISPDFAIHASTQ
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEECCCE
MTVTSAAGVDFVRELGCALVVLARECSLAEIAKIRTATAERPLPLEIFVHGALCVAYSGQ
EEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEEHEEEEEECCC
CLTSEALGGRSANRGECAQACRLPYELVADGERVDLGERAYLLSPQDLAGIDLIPELLPA
EEEHHHCCCCCCCCHHHHHHHCCCHHHHCCCCEECCCCCEEEECCCCCCCHHHHHHHHHC
GLASLKIEGRLKSPEYVASVTRVYRQALDRAAAELEKTGPVDPASYYALEMAFSRGLSTG
CHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCH
WLEGIDNQRLVHARYGKKRGVYLGEVLRVQEGTVELVLEAPLKPGDGVVFDGGRPDEPEQ
HHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCC
GGRVYMVEMHHSLARVGFGRGDIRWRRVQPGDKLWKTSDPELERRVRRSFAPGAAPFQRP
CCEEEEEEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
VHLQVSGRPGEALVLEAQDESGRLVRVQSSLPLAEAHKHTLDTERLAEQLGRLGGTPFKL
EEEEECCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEE
GALDNHIEGAVHLPVSELNRLRREVVERLIALRAEPLRWQSHPTPAAPRVNGEAPTLAEP
CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
ELIALVRSFAQLDAVLDSGLRTVYCELEDVRQYRRAVERARAAGATLFVAPPRIAKMGEE
HHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCHH
WILSQVRASGADGYLVRNYDHLHYFASERCVGDFSLNVANPLAAKYLKERYALERLTASY
HHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHC
DLNVAQLSALLAGAPPAWFEITIHQHMPLFHMEHCVFCAFLSEGTDHTNCGRPCERVEVQ
CCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
LRDRVGSAHPLKADAGCRNTLFNARAQSAAEYVQHLVGLGARYLRVEFLNDPPERVGTVL
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHH
DSYRKLLAGQMSGSELWRELKLFNQLGVTRGQLPY
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]