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The map label for this gene is ygeV [H]

Identifier: 37520491

GI number: 37520491

Start: 979580

End: 982117

Strand: Direct

Name: ygeV [H]

Synonym: glr0922

Alternate gene names: 37520491

Gene position: 979580-982117 (Clockwise)

Preceding gene: 37520484

Following gene: 37520492

Centisome position: 21.03

GC content: 64.14

Gene sequence:

>2538_bases
ATGCAGCCGACCGCCGCCGAGGCCATCCCCTGGCTTCGTGAAAATACCCTCTTCGCAGCGCTAGGTGAAGCGGCCCTCGC
CGATTTGGCGGGCGAACTGACTGAGCAAACGGTCCAGGGCAATCGGCGGCTGGTACTCGAAGACAGCCCTGCCGAAGAAC
TGATCATTCTCAAAGAAGGCCGCCTCGAAAGTTACCGCACCAGTCCGAGCGGCCCGGCCGCCGCGCTCAGTTTGCTCCCA
GGTTCGGTGGTGCATCTAGTCGAACTGCTGATGGAGCGCCCCGTGCAACGGACGCTTATCACCCTTGCCGACTGCCGGCT
TTGGATCGTTCCGGCGGTGCGCTTTCGCGAGCTTGCTGCCCGCTATCGCGAGATCGCCCGCGCTCTGCCGGAGGCGCTGG
CGGCAGAAGTGGCGCAACTGGCGGCCCAGCTCAATTACGAACAGGAGCGCGCCGCCGCGCTCAGGCCGTATCTAATTACC
CGCGCCCGCCGCGGCATCGTCGGCAAGAGCCGCTACGCCGCCACCCTGCGCCGCCAGATCCGGTCGGCCACGGCCGATCG
CAAGCCCGTGCTCCTCTTCGGCGAACCGGGCCTCGAAAAGGACAACGCGGCGGCCCTCATCCACTTCGGCTCCCCCGCCC
GCCGCGAACCGATTATCCAGGTGAATTGCGCCACGCTGCAGCCGGGGGGTGCCGATCTGTTCGGCCGGGCGGGCGGGCGG
CCCGGCCTCATCGAGTGGGTGGGGGAGGGCACGTTGGTGCTCAACAACATCCAGGATTTGCCCGCCGGATTGCTCGCCAC
CGTCGAGCAGATGCTCGCTACCGGCACCTACCGGCCTGTCGCCCGCCCGGAGGAGATCCCCCCCGCCCCGCGGCCCTTGC
GCGCCCGCGTCGTGCTGGTTTCTGAAAAAGCGTTCTCGGGCCTGGAGCGGCTGATGGGCCAGGTCATCAAGGTACCGCCA
CTGCGGGTGCGCAAGGGCGATATCGCCGTGCAGGTCGATTACTACCTCAATTTGCTGGTCAGATCCGAGGGGTTACCCTT
CAAGCCGCGCGTCAGCCCCGAGGCCCTCAGGCGATTGCAGAGCTACGATTTTCCGGGCAACCTGGCGGAACTGGCCACGC
TGGTGAGTCGTGCGGTTTCCCAGGCGGCCGGGGCGCGCGAACTGAGCGAAGAAGTCTTCTGGCCCGCCCAGGGGCGCAAA
AAACGCTTTCGCGCCAATTTGCTCAACGGCTTTCCGTGGCTGAGGCGCTTTTTGCGCAGCGCCTGGTGGCCCGACCGGAT
CAACTTCGGATTTACCGCCGGTTTTTTCGTTTTTATCGTCGCCGTGCTCTTTGTCGGGCCGCAACAGCGCGAGGAGAACT
TTGCCCTCAATATGTTCTGGGCCTGGTGGTGGCCGCTGGTATTGGTCGGTTTCCCTTTCGTGGGCCGCCTCTGGTGTGCG
GTTTGCCCCTTCATGATCTGGGGAGAAATCGTCCAGAAAATCTCGTTGCTTATCTTTCCGCGCACCCTCAGGCGCTGGCC
CCGCGAGCAGGCCGAGCGCTGGGGCGGTTGGTTTCTCTTTGCCCTATTCGTCCTGATTTTTCTGTGGGAAGAACTGTGGG
ATCTGCAGAACACCGCCTACCTTTCTGCCTGGCTGCTGTTACTGATTACCGGCGGGGCGGTGGTCTGTTCGCTGATCTTC
GAGCGGCGCTTCTGGTGCCGATATCTGTGTCCGATTGGCGGCATGAACGGTCTATTCGCCAAGCTCTCCGTCACCGAACT
GCGCGCCCAACAGGGCATCTGCTCAGCCACCTGCACCACCTACCAGTGCTACAAAGGCGGTCCCGCCAAGGACGAAGGCC
AGGCCACCGGTGGCTGTCCGCTCTACTCCCACCCCGCCCAGCTCGAGGACAACCGCGACTGCGTGCTGTGCATGACCTGC
CTCAAAGCCTGCCCGCACCGCTCGGTCGAATTGAACCTGCGCCCGCCCGGCATCGAACTGTGGACGACCCACGTCCCACG
CGGCTACGAGGTGGCGCTGTTGCTGTTGCTATTGGGCGGCGTTTTTCTGCATCGCTTACCCGAGGTGCAGAGCCGCCTCG
GCTGGCCGTGGGGGATTGAGGCGTTTGGAGCACATCTGGCGCTGGCGCTGATCGCCCTGGCAGTCCCGGCCTTGGTACCG
CTCGCAGCCCACGGCCTGTTTCGCCTGGTGGCAGGCGGGCAGAGCGCCCGGCCGTTCGTCGAACTGGCCTATGGCTATTT
GCCCCTGGTGTTGGGAGGCACCCTCGCCCATTACTTAAATCTCGGCCTCGGGGAAGCGGGAAGGATTGTTCCGGTTACCT
TAGCCACCTTTGGCCTTGCCGGAGCGAACCTGCCGGTGCTGGTTGCCCACCCGGCAGTGATCACTTTTTTGCAGGGTGCC
TTGCTGATCGCATCGGTGCCGCTCAGCATCTGGTTGACCCAAAAAATCGCGCGCATTCCCGTGCGCTCACTGTTACCGCA
GCATCTGGGGGTGTTGACTCTAGCTGGCGGGCTATGGGTGCTGATTGTCGGGTATTAG

Upstream 100 bases:

>100_bases
CAACCATCCGCACATTATCACCGCTTGGGCGACGATAAGGGTGTGATGGCGCCGACAGATCCGGTGCACCATAATAAGTA
CGCGCGAACGCCTCTACAGT

Downstream 100 bases:

>100_bases
ATCCCTTAAGTCCAAGGTGAAACAACGGCGGGCAAAGGTACTGTACTTCATCGAACCATTTTTTCGAACAGTCAAACCCG
TTGCTTGGCACTGGGTTGCT

Product: nitrogen assimilation regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 845; Mature: 845

Protein sequence:

>845_residues
MQPTAAEAIPWLRENTLFAALGEAALADLAGELTEQTVQGNRRLVLEDSPAEELIILKEGRLESYRTSPSGPAAALSLLP
GSVVHLVELLMERPVQRTLITLADCRLWIVPAVRFRELAARYREIARALPEALAAEVAQLAAQLNYEQERAAALRPYLIT
RARRGIVGKSRYAATLRRQIRSATADRKPVLLFGEPGLEKDNAAALIHFGSPARREPIIQVNCATLQPGGADLFGRAGGR
PGLIEWVGEGTLVLNNIQDLPAGLLATVEQMLATGTYRPVARPEEIPPAPRPLRARVVLVSEKAFSGLERLMGQVIKVPP
LRVRKGDIAVQVDYYLNLLVRSEGLPFKPRVSPEALRRLQSYDFPGNLAELATLVSRAVSQAAGARELSEEVFWPAQGRK
KRFRANLLNGFPWLRRFLRSAWWPDRINFGFTAGFFVFIVAVLFVGPQQREENFALNMFWAWWWPLVLVGFPFVGRLWCA
VCPFMIWGEIVQKISLLIFPRTLRRWPREQAERWGGWFLFALFVLIFLWEELWDLQNTAYLSAWLLLLITGGAVVCSLIF
ERRFWCRYLCPIGGMNGLFAKLSVTELRAQQGICSATCTTYQCYKGGPAKDEGQATGGCPLYSHPAQLEDNRDCVLCMTC
LKACPHRSVELNLRPPGIELWTTHVPRGYEVALLLLLLGGVFLHRLPEVQSRLGWPWGIEAFGAHLALALIALAVPALVP
LAAHGLFRLVAGGQSARPFVELAYGYLPLVLGGTLAHYLNLGLGEAGRIVPVTLATFGLAGANLPVLVAHPAVITFLQGA
LLIASVPLSIWLTQKIARIPVRSLLPQHLGVLTLAGGLWVLIVGY

Sequences:

>Translated_845_residues
MQPTAAEAIPWLRENTLFAALGEAALADLAGELTEQTVQGNRRLVLEDSPAEELIILKEGRLESYRTSPSGPAAALSLLP
GSVVHLVELLMERPVQRTLITLADCRLWIVPAVRFRELAARYREIARALPEALAAEVAQLAAQLNYEQERAAALRPYLIT
RARRGIVGKSRYAATLRRQIRSATADRKPVLLFGEPGLEKDNAAALIHFGSPARREPIIQVNCATLQPGGADLFGRAGGR
PGLIEWVGEGTLVLNNIQDLPAGLLATVEQMLATGTYRPVARPEEIPPAPRPLRARVVLVSEKAFSGLERLMGQVIKVPP
LRVRKGDIAVQVDYYLNLLVRSEGLPFKPRVSPEALRRLQSYDFPGNLAELATLVSRAVSQAAGARELSEEVFWPAQGRK
KRFRANLLNGFPWLRRFLRSAWWPDRINFGFTAGFFVFIVAVLFVGPQQREENFALNMFWAWWWPLVLVGFPFVGRLWCA
VCPFMIWGEIVQKISLLIFPRTLRRWPREQAERWGGWFLFALFVLIFLWEELWDLQNTAYLSAWLLLLITGGAVVCSLIF
ERRFWCRYLCPIGGMNGLFAKLSVTELRAQQGICSATCTTYQCYKGGPAKDEGQATGGCPLYSHPAQLEDNRDCVLCMTC
LKACPHRSVELNLRPPGIELWTTHVPRGYEVALLLLLLGGVFLHRLPEVQSRLGWPWGIEAFGAHLALALIALAVPALVP
LAAHGLFRLVAGGQSARPFVELAYGYLPLVLGGTLAHYLNLGLGEAGRIVPVTLATFGLAGANLPVLVAHPAVITFLQGA
LLIASVPLSIWLTQKIARIPVRSLLPQHLGVLTLAGGLWVLIVGY
>Mature_845_residues
MQPTAAEAIPWLRENTLFAALGEAALADLAGELTEQTVQGNRRLVLEDSPAEELIILKEGRLESYRTSPSGPAAALSLLP
GSVVHLVELLMERPVQRTLITLADCRLWIVPAVRFRELAARYREIARALPEALAAEVAQLAAQLNYEQERAAALRPYLIT
RARRGIVGKSRYAATLRRQIRSATADRKPVLLFGEPGLEKDNAAALIHFGSPARREPIIQVNCATLQPGGADLFGRAGGR
PGLIEWVGEGTLVLNNIQDLPAGLLATVEQMLATGTYRPVARPEEIPPAPRPLRARVVLVSEKAFSGLERLMGQVIKVPP
LRVRKGDIAVQVDYYLNLLVRSEGLPFKPRVSPEALRRLQSYDFPGNLAELATLVSRAVSQAAGARELSEEVFWPAQGRK
KRFRANLLNGFPWLRRFLRSAWWPDRINFGFTAGFFVFIVAVLFVGPQQREENFALNMFWAWWWPLVLVGFPFVGRLWCA
VCPFMIWGEIVQKISLLIFPRTLRRWPREQAERWGGWFLFALFVLIFLWEELWDLQNTAYLSAWLLLLITGGAVVCSLIF
ERRFWCRYLCPIGGMNGLFAKLSVTELRAQQGICSATCTTYQCYKGGPAKDEGQATGGCPLYSHPAQLEDNRDCVLCMTC
LKACPHRSVELNLRPPGIELWTTHVPRGYEVALLLLLLGGVFLHRLPEVQSRLGWPWGIEAFGAHLALALIALAVPALVP
LAAHGLFRLVAGGQSARPFVELAYGYLPLVLGGTLAHYLNLGLGEAGRIVPVTLATFGLAGANLPVLVAHPAVITFLQGA
LLIASVPLSIWLTQKIARIPVRSLLPQHLGVLTLAGGLWVLIVGY

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

Organism=Escherichia coli, GI1789233, Length=232, Percent_Identity=31.8965517241379, Blast_Score=88, Evalue=3e-18,
Organism=Escherichia coli, GI87081872, Length=240, Percent_Identity=27.5, Blast_Score=83, Evalue=8e-17,
Organism=Escherichia coli, GI1788550, Length=227, Percent_Identity=30.8370044052863, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87082152, Length=248, Percent_Identity=31.0483870967742, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87082117, Length=267, Percent_Identity=28.4644194756554, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1787583, Length=221, Percent_Identity=25.7918552036199, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI1788905, Length=246, Percent_Identity=28.4552845528455, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789087, Length=386, Percent_Identity=24.3523316062176, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1790437, Length=237, Percent_Identity=27.4261603375527, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003018
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR000014
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 93385; Mature: 93385

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50042 CNMP_BINDING_3 ; PS50045 SIGMA54_INTERACT_4 ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTAAEAIPWLRENTLFAALGEAALADLAGELTEQTVQGNRRLVLEDSPAEELIILKEG
CCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECC
RLESYRTSPSGPAAALSLLPGSVVHLVELLMERPVQRTLITLADCRLWIVPAVRFRELAA
CCHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHHHH
RYREIARALPEALAAEVAQLAAQLNYEQERAAALRPYLITRARRGIVGKSRYAATLRRQI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RSATADRKPVLLFGEPGLEKDNAAALIHFGSPARREPIIQVNCATLQPGGADLFGRAGGR
HHHCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCHHHCCCCCC
PGLIEWVGEGTLVLNNIQDLPAGLLATVEQMLATGTYRPVARPEEIPPAPRPLRARVVLV
CCCEEECCCCEEEECCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE
SEKAFSGLERLMGQVIKVPPLRVRKGDIAVQVDYYLNLLVRSEGLPFKPRVSPEALRRLQ
EHHHHHHHHHHHHHHHCCCCCEEECCCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
SYDFPGNLAELATLVSRAVSQAAGARELSEEVFWPAQGRKKRFRANLLNGFPWLRRFLRS
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AWWPDRINFGFTAGFFVFIVAVLFVGPQQREENFALNMFWAWWWPLVLVGFPFVGRLWCA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHH
VCPFMIWGEIVQKISLLIFPRTLRRWPREQAERWGGWFLFALFVLIFLWEELWDLQNTAY
HHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHH
LSAWLLLLITGGAVVCSLIFERRFWCRYLCPIGGMNGLFAKLSVTELRAQQGICSATCTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCE
YQCYKGGPAKDEGQATGGCPLYSHPAQLEDNRDCVLCMTCLKACPHRSVELNLRPPGIEL
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEE
WTTHVPRGYEVALLLLLLGGVFLHRLPEVQSRLGWPWGIEAFGAHLALALIALAVPALVP
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAAHGLFRLVAGGQSARPFVELAYGYLPLVLGGTLAHYLNLGLGEAGRIVPVTLATFGLA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCC
GANLPVLVAHPAVITFLQGALLIASVPLSIWLTQKIARIPVRSLLPQHLGVLTLAGGLWV
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEE
LIVGY
EEEEC
>Mature Secondary Structure
MQPTAAEAIPWLRENTLFAALGEAALADLAGELTEQTVQGNRRLVLEDSPAEELIILKEG
CCCCHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECC
RLESYRTSPSGPAAALSLLPGSVVHLVELLMERPVQRTLITLADCRLWIVPAVRFRELAA
CCHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEHHHHHHHHHHH
RYREIARALPEALAAEVAQLAAQLNYEQERAAALRPYLITRARRGIVGKSRYAATLRRQI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
RSATADRKPVLLFGEPGLEKDNAAALIHFGSPARREPIIQVNCATLQPGGADLFGRAGGR
HHHCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCCCHHHCCCCCC
PGLIEWVGEGTLVLNNIQDLPAGLLATVEQMLATGTYRPVARPEEIPPAPRPLRARVVLV
CCCEEECCCCEEEECCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE
SEKAFSGLERLMGQVIKVPPLRVRKGDIAVQVDYYLNLLVRSEGLPFKPRVSPEALRRLQ
EHHHHHHHHHHHHHHHCCCCCEEECCCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
SYDFPGNLAELATLVSRAVSQAAGARELSEEVFWPAQGRKKRFRANLLNGFPWLRRFLRS
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHH
AWWPDRINFGFTAGFFVFIVAVLFVGPQQREENFALNMFWAWWWPLVLVGFPFVGRLWCA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHH
VCPFMIWGEIVQKISLLIFPRTLRRWPREQAERWGGWFLFALFVLIFLWEELWDLQNTAY
HHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHH
LSAWLLLLITGGAVVCSLIFERRFWCRYLCPIGGMNGLFAKLSVTELRAQQGICSATCTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCE
YQCYKGGPAKDEGQATGGCPLYSHPAQLEDNRDCVLCMTCLKACPHRSVELNLRPPGIEL
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEE
WTTHVPRGYEVALLLLLLGGVFLHRLPEVQSRLGWPWGIEAFGAHLALALIALAVPALVP
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAAHGLFRLVAGGQSARPFVELAYGYLPLVLGGTLAHYLNLGLGEAGRIVPVTLATFGLA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCC
GANLPVLVAHPAVITFLQGALLIASVPLSIWLTQKIARIPVRSLLPQHLGVLTLAGGLWV
CCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEE
LIVGY
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]