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The map label for this gene is pilQ [H]

Identifier: 37520489

GI number: 37520489

Start: 975910

End: 977808

Strand: Reverse

Name: pilQ [H]

Synonym: gll0920

Alternate gene names: 37520489

Gene position: 977808-975910 (Counterclockwise)

Preceding gene: 37520490

Following gene: 37520488

Centisome position: 20.99

GC content: 65.24

Gene sequence:

>1899_bases
ATGCACGTGAAACGCTGGCTGAGCTTGCCCGCCGGATTCCTGCTTGCCGGCTGTCTGAGTACGGCGGCCTGGGCCGCCCC
CCTGGCGGGCATCGATGTGGAAGGCAATACCCTGCGCATCCGCACCGCCGGGACGGTCGCCTTTCAAATCGAGCGCAACA
CCCCCAACGAGGTGGTGCTGTTTTTGCCCGGCACCGAACCGGGCAGCGTGGCCGCGAGCCAGGAGACGGCCGCCGGGACG
GTGAGCGTGCAGGTGGTGGCCGGGGGAATGCGCCTCACCTACCGCCCCCGCGCCCTGGGCAGCACCTATCAGGTCGTGGC
CGGCCAAGCGGTGGCGGATAGCCAGACTATCGAAATTCGCGGCTCGGGGGGACTGGCCACGGTGCCGCCCCCTCCGCCCA
TAGCCCAGACGCCGCCGCAGGTGTCACCCGAAGAGCGGGTGAGCCTGAAGGTGCGCGACGGCGATGTCAAAGACACCCTT
GCGCTGCTCGGGCGGGTGGCCAGGGCCAACGTCGTCACCGAAAGCTCGGTCAGCGGCCGGGTCTCGCTCAACCTCGAACA
GGTCACCTTCAACGACGCCCTCACCGCCGTCGCCCAGGTGGCGGGCCTCACGATCAACAAATCCGAAGGCAATGTCTATG
TCGTGAGCCAACTCAAAAGCGGCCTGCCCCAACTGCCGGTACCGACGACCCCCGGCGGCGCCGACCCGAGCAAGCGGCCG
GTCAGCTTCAGCGTCAAAAGCGCCGAGCTGGGCACCGTGGTCGAAAATATTTCCAACCAGGCGGGGGCGCAGCTCATCAT
CAAAGGCCAACTCTCCGACCGGGTGACCGGCCGGGTCTCGGGGATCCCCTTCGAGGAGGCCCTCGGCCAACTGCTCAACG
GCACCCGCTACGGATTCGTCCGCGAGGGCCGCACCTACCTCATCGGCGATGCCACCCCCGGCACCCCCACCAGCCGGGCC
ATCGAGCGCACCGAAGCTATCGCCCTCTCGTTCACCCAGGCGAAAAACGTACCCAAGCTCATCCCGGCGAGCCTCACCCA
ATTTGTCAAAATCGACGAGCCGCGCAACGCCGTGGTGGTGAGCGGCACCGACGTGTTGCGCACCCGGGTGCGCGACTTGT
TGCAGCAGATCGACAAGCCCCTGCGCCAGGTGGTCTTCGAGGTGAAGATCGTCGAACTGAGCGACGCCGGTTCGCGCGAA
CTGAACGCCCTGCGCACCATTCAGTCCGGCAGCGCCGTCTCCCCCGGCAACACCGCTCCTTTGAGCTTGGGTGGTTTGTT
CTCGCCGCCCACCTCGTTTGCCACCTTCAACGACATCGCCCGCGCCATCGTTGTGATCAACGGGCTGATCACCGAGAACA
AAGCGCGGGTGGTCACCGACACCAAGCTCAACACGATCACTGGCCAAAAAGCGTCGATCGACGTGCAAACCGACATCAAC
TTGATTCTCAACCAGCTAACCAACGTCAGCGGCGCCACCGTCAACAACACCACCCTCAGCACCCTCCGCGCCGGCACCGT
GGTCGAACTGACCCCCACCGTCCAGGCCGACGGCAATGTGCTGGCCGAATTGAGCGTCGAATCCTCCGTGCCCCAGGGCA
CCACCACGTTGACCTCGTCCGGCACGACCGTCCCTCCGAACATTGCCCGGCGCAAGGTCAAAAATATCATCCTGGTCAAA
GACGGCCAGACCCTCGAAATCGGCGGGCTCATCCAGACCACCAACCGCGAGGTCATCACCCGCGTGCCGTTTTTTGGCTA
CATCCCGCTTATCGGCCAGCTGTTCAGCAACACCAATGTGAGCCTGGAGCAGAGCGAACTGGTGGTCTTCATCACCCCGC
GCGTGCGCGATGTGCAGCCGTTACCCGACACCAAACTGCCCCTGGAGCCGCCGCGGTGA

Upstream 100 bases:

>100_bases
GCTGCCCGAGGCCGGCATCGCCAAGGTCATGGAGGGCAGCACCACCATTGAGGAACTTCTGCGGGTTGTGTCAGTCTAGA
CGGGCGTCCATCGGAGAAAA

Downstream 100 bases:

>100_bases
GACGCATCCGCAACCGCCGGGGCTTCACCCTGGTGCTGGTGCTGCTTTTGGGGGCGATTTTGCTGGTGGTGGGGACGACC
GTCTTCTCGGTCTCGGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MHVKRWLSLPAGFLLAGCLSTAAWAAPLAGIDVEGNTLRIRTAGTVAFQIERNTPNEVVLFLPGTEPGSVAASQETAAGT
VSVQVVAGGMRLTYRPRALGSTYQVVAGQAVADSQTIEIRGSGGLATVPPPPPIAQTPPQVSPEERVSLKVRDGDVKDTL
ALLGRVARANVVTESSVSGRVSLNLEQVTFNDALTAVAQVAGLTINKSEGNVYVVSQLKSGLPQLPVPTTPGGADPSKRP
VSFSVKSAELGTVVENISNQAGAQLIIKGQLSDRVTGRVSGIPFEEALGQLLNGTRYGFVREGRTYLIGDATPGTPTSRA
IERTEAIALSFTQAKNVPKLIPASLTQFVKIDEPRNAVVVSGTDVLRTRVRDLLQQIDKPLRQVVFEVKIVELSDAGSRE
LNALRTIQSGSAVSPGNTAPLSLGGLFSPPTSFATFNDIARAIVVINGLITENKARVVTDTKLNTITGQKASIDVQTDIN
LILNQLTNVSGATVNNTTLSTLRAGTVVELTPTVQADGNVLAELSVESSVPQGTTTLTSSGTTVPPNIARRKVKNIILVK
DGQTLEIGGLIQTTNREVITRVPFFGYIPLIGQLFSNTNVSLEQSELVVFITPRVRDVQPLPDTKLPLEPPR

Sequences:

>Translated_632_residues
MHVKRWLSLPAGFLLAGCLSTAAWAAPLAGIDVEGNTLRIRTAGTVAFQIERNTPNEVVLFLPGTEPGSVAASQETAAGT
VSVQVVAGGMRLTYRPRALGSTYQVVAGQAVADSQTIEIRGSGGLATVPPPPPIAQTPPQVSPEERVSLKVRDGDVKDTL
ALLGRVARANVVTESSVSGRVSLNLEQVTFNDALTAVAQVAGLTINKSEGNVYVVSQLKSGLPQLPVPTTPGGADPSKRP
VSFSVKSAELGTVVENISNQAGAQLIIKGQLSDRVTGRVSGIPFEEALGQLLNGTRYGFVREGRTYLIGDATPGTPTSRA
IERTEAIALSFTQAKNVPKLIPASLTQFVKIDEPRNAVVVSGTDVLRTRVRDLLQQIDKPLRQVVFEVKIVELSDAGSRE
LNALRTIQSGSAVSPGNTAPLSLGGLFSPPTSFATFNDIARAIVVINGLITENKARVVTDTKLNTITGQKASIDVQTDIN
LILNQLTNVSGATVNNTTLSTLRAGTVVELTPTVQADGNVLAELSVESSVPQGTTTLTSSGTTVPPNIARRKVKNIILVK
DGQTLEIGGLIQTTNREVITRVPFFGYIPLIGQLFSNTNVSLEQSELVVFITPRVRDVQPLPDTKLPLEPPR
>Mature_632_residues
MHVKRWLSLPAGFLLAGCLSTAAWAAPLAGIDVEGNTLRIRTAGTVAFQIERNTPNEVVLFLPGTEPGSVAASQETAAGT
VSVQVVAGGMRLTYRPRALGSTYQVVAGQAVADSQTIEIRGSGGLATVPPPPPIAQTPPQVSPEERVSLKVRDGDVKDTL
ALLGRVARANVVTESSVSGRVSLNLEQVTFNDALTAVAQVAGLTINKSEGNVYVVSQLKSGLPQLPVPTTPGGADPSKRP
VSFSVKSAELGTVVENISNQAGAQLIIKGQLSDRVTGRVSGIPFEEALGQLLNGTRYGFVREGRTYLIGDATPGTPTSRA
IERTEAIALSFTQAKNVPKLIPASLTQFVKIDEPRNAVVVSGTDVLRTRVRDLLQQIDKPLRQVVFEVKIVELSDAGSRE
LNALRTIQSGSAVSPGNTAPLSLGGLFSPPTSFATFNDIARAIVVINGLITENKARVVTDTKLNTITGQKASIDVQTDIN
LILNQLTNVSGATVNNTTLSTLRAGTVVELTPTVQADGNVLAELSVESSVPQGTTTLTSSGTTVPPNIARRKVKNIILVK
DGQTLEIGGLIQTTNREVITRVPFFGYIPLIGQLFSNTNVSLEQSELVVFITPRVRDVQPLPDTKLPLEPPR

Specific function: Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a "porthole" allowing passage of the fimbrae through the outer membrane [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=288, Percent_Identity=27.7777777777778, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1789793, Length=432, Percent_Identity=23.8425925925926, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR013355
- InterPro:   IPR011662
- InterPro:   IPR004846
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N; PF07660 STN [H]

EC number: NA

Molecular weight: Translated: 66757; Mature: 66757

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVKRWLSLPAGFLLAGCLSTAAWAAPLAGIDVEGNTLRIRTAGTVAFQIERNTPNEVVL
CCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEEECEEEEEEECCCCCCEEE
FLPGTEPGSVAASQETAAGTVSVQVVAGGMRLTYRPRALGSTYQVVAGQAVADSQTIEIR
EECCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCHHCCCCEEEEECCEECCCEEEEEE
GSGGLATVPPPPPIAQTPPQVSPEERVSLKVRDGDVKDTLALLGRVARANVVTESSVSGR
CCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCEEECCCCCCE
VSLNLEQVTFNDALTAVAQVAGLTINKSEGNVYVVSQLKSGLPQLPVPTTPGGADPSKRP
EEEEEEEEEHHHHHHHHHHHHCEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCC
VSFSVKSAELGTVVENISNQAGAQLIIKGQLSDRVTGRVSGIPFEEALGQLLNGTRYGFV
EEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEECCCCHHHHHHHHHCCCCCEEE
REGRTYLIGDATPGTPTSRAIERTEAIALSFTQAKNVPKLIPASLTQFVKIDEPRNAVVV
ECCCEEEEECCCCCCCCHHHHHHHHEEEEEEHHHCCCCHHHHHHHHHHEEECCCCCEEEE
SGTDVLRTRVRDLLQQIDKPLRQVVFEVKIVELSDAGSRELNALRTIQSGSAVSPGNTAP
ECHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC
LSLGGLFSPPTSFATFNDIARAIVVINGLITENKARVVTDTKLNTITGQKASIDVQTDIN
EEECCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEEEECEEEEECCCCEEEEEECCHH
LILNQLTNVSGATVNNTTLSTLRAGTVVELTPTVQADGNVLAELSVESSVPQGTTTLTSS
HHHHHHCCCCCCEECCCCHHHCCCCEEEEEECCEECCCCEEEEEEECCCCCCCCEEEECC
GTTVPPNIARRKVKNIILVKDGQTLEIGGLIQTTNREVITRVPFFGYIPLIGQLFSNTNV
CCCCCHHHHHHHHCEEEEEECCCEEEECCEEEECCCEEEEECCCHHHHHHHHHHHCCCCC
SLEQSELVVFITPRVRDVQPLPDTKLPLEPPR
EEECCCEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHVKRWLSLPAGFLLAGCLSTAAWAAPLAGIDVEGNTLRIRTAGTVAFQIERNTPNEVVL
CCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEEECEEEEEEECCCCCCEEE
FLPGTEPGSVAASQETAAGTVSVQVVAGGMRLTYRPRALGSTYQVVAGQAVADSQTIEIR
EECCCCCCCCCCCCCCCCCEEEEEEEECCEEEEECCHHCCCCEEEEECCEECCCEEEEEE
GSGGLATVPPPPPIAQTPPQVSPEERVSLKVRDGDVKDTLALLGRVARANVVTESSVSGR
CCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCEEECCCCCCE
VSLNLEQVTFNDALTAVAQVAGLTINKSEGNVYVVSQLKSGLPQLPVPTTPGGADPSKRP
EEEEEEEEEHHHHHHHHHHHHCEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCC
VSFSVKSAELGTVVENISNQAGAQLIIKGQLSDRVTGRVSGIPFEEALGQLLNGTRYGFV
EEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEECCCCHHHHHHHHHCCCCCEEE
REGRTYLIGDATPGTPTSRAIERTEAIALSFTQAKNVPKLIPASLTQFVKIDEPRNAVVV
ECCCEEEEECCCCCCCCHHHHHHHHEEEEEEHHHCCCCHHHHHHHHHHEEECCCCCEEEE
SGTDVLRTRVRDLLQQIDKPLRQVVFEVKIVELSDAGSRELNALRTIQSGSAVSPGNTAP
ECHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC
LSLGGLFSPPTSFATFNDIARAIVVINGLITENKARVVTDTKLNTITGQKASIDVQTDIN
EEECCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCEEEEECEEEEECCCCEEEEEECCHH
LILNQLTNVSGATVNNTTLSTLRAGTVVELTPTVQADGNVLAELSVESSVPQGTTTLTSS
HHHHHHCCCCCCEECCCCHHHCCCCEEEEEECCEECCCCEEEEEEECCCCCCCCEEEECC
GTTVPPNIARRKVKNIILVKDGQTLEIGGLIQTTNREVITRVPFFGYIPLIGQLFSNTNV
CCCCCHHHHHHHHCEEEEEECCCEEEECCEEEECCCEEEEECCCHHHHHHHHHHHCCCCC
SLEQSELVVFITPRVRDVQPLPDTKLPLEPPR
EEECCCEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7901733; 10984043 [H]