| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is tgt
Identifier: 37520371
GI number: 37520371
Start: 853944
End: 855080
Strand: Direct
Name: tgt
Synonym: glr0802
Alternate gene names: 37520371
Gene position: 853944-855080 (Clockwise)
Preceding gene: 37520370
Following gene: 37520372
Centisome position: 18.33
GC content: 65.96
Gene sequence:
>1137_bases TTGACGGCTAGTTTTGCCTTCACAATCGAGCACCGCGACGGCGAAGCCCGCGCCGGTACCTTCGCCACCCCCCATGGACC GGTGTACACGCCCTGCTTCATGCCGGTGGGCACCCAGGCGACCGTCAAAACCCTGACACCCGCCCAACTCGCCGAGACTG GCGCCCAGATGATTTTGGCCAACACCTATCACCTGAGTCTGCAGCCGGGCGCGGATATCGTCGCGGGAGCCGGTGGACTG CACGGGTTTATGCAGTGGCCGGGGCCGATTCTCACCGACTCCGGGGGCTTCCAGGTCTTTAGCTTGAGCAGCCTGCGCAC GATCGACGACGACGGGGTGACTTTTCGCGAACCGAAAAGCGGCGCCCTCGTGCGCTTTACACCCGAGCACGCCGTCGCTG TGCAAAACGCGCTCGGGGCGGATGTAATCATGGCCTTCGACGAGTGCCCACCTTACCCGGCCGACCGCGAGCAGGTCGAA GGGGCGGTGGAGCGCACTTTGCGCTGGTTCGAGCGCTGTGTGGAGGCCCACCGCCGCAGCGATCAGGCGTTGTTCGGCAT CGTGCAGGGCGGCGTCTGGCCGGATCTGCGCCGCCGCTGCGCCGAGGGGCTCGTCGCGGCGGATCTGCCCGGCTACGCCA TCGGCGGGGTGAGCGTCGGTGAGCCGCAAACGCTCATCGAGCGGGTGGTGCGCGTCACGGCCCCTCTGTTGCCGGAGCAC AAGCCGCGCTACTTGATGGGAGTAGGCACCTTCCGCGAAATGGCCCAGGCGGTGGCCGTGGGGGTGGATCTGTTCGACTG CGTGATGCCCACCCGCGTCGCCCGCCACGGCAGTGCCCTATTGCTCGGCACCGGGGGCGACCGTCGCATCAACCTCAAAA ACGCCCAATTTCGCCGCGACTACGAACCGCTCGACTGCGTGTGCCCTTGCTATACCTGCCGTCACTTCAGCCGCGCCTAC CTTGCCCACCTGGTGCGCAGCGAAGAGATCCTGGCGATGACGCTGCTGTCGATTCACAACGTCGCCACACTCACCCGCTT CGCCGCCTTGCTGCGCTGCGCAATCGCTACCGGGAGCTTCGCGCAGGAGTTTGCGCACTATTTGCAAAGCGGGCCTGAGC CCGTCCTCAGCAATTAA
Upstream 100 bases:
>100_bases CAGCAGCGGCTCAACACGGGTCTGCGCTCCGTGGTCGAAGAGGTGCTCATGGAGTCTTCGTGCCTTTGCGAGGATTGGGA CGAGGACGACGACGACGACC
Downstream 100 bases:
>100_bases ATCAAACTCATAATGTCCATAAGCAACGATTATCTAAAAAAGAAAGATCTTCAGAGCTTAAAAACTCAGTAAAATAGAGC GGGATAAGTGCAACCCTGCC
Product: transfer RNA-guanine transglycosylase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTASFAFTIEHRDGEARAGTFATPHGPVYTPCFMPVGTQATVKTLTPAQLAETGAQMILANTYHLSLQPGADIVAGAGGL HGFMQWPGPILTDSGGFQVFSLSSLRTIDDDGVTFREPKSGALVRFTPEHAVAVQNALGADVIMAFDECPPYPADREQVE GAVERTLRWFERCVEAHRRSDQALFGIVQGGVWPDLRRRCAEGLVAADLPGYAIGGVSVGEPQTLIERVVRVTAPLLPEH KPRYLMGVGTFREMAQAVAVGVDLFDCVMPTRVARHGSALLLGTGGDRRINLKNAQFRRDYEPLDCVCPCYTCRHFSRAY LAHLVRSEEILAMTLLSIHNVATLTRFAALLRCAIATGSFAQEFAHYLQSGPEPVLSN
Sequences:
>Translated_378_residues MTASFAFTIEHRDGEARAGTFATPHGPVYTPCFMPVGTQATVKTLTPAQLAETGAQMILANTYHLSLQPGADIVAGAGGL HGFMQWPGPILTDSGGFQVFSLSSLRTIDDDGVTFREPKSGALVRFTPEHAVAVQNALGADVIMAFDECPPYPADREQVE GAVERTLRWFERCVEAHRRSDQALFGIVQGGVWPDLRRRCAEGLVAADLPGYAIGGVSVGEPQTLIERVVRVTAPLLPEH KPRYLMGVGTFREMAQAVAVGVDLFDCVMPTRVARHGSALLLGTGGDRRINLKNAQFRRDYEPLDCVCPCYTCRHFSRAY LAHLVRSEEILAMTLLSIHNVATLTRFAALLRCAIATGSFAQEFAHYLQSGPEPVLSN >Mature_377_residues TASFAFTIEHRDGEARAGTFATPHGPVYTPCFMPVGTQATVKTLTPAQLAETGAQMILANTYHLSLQPGADIVAGAGGLH GFMQWPGPILTDSGGFQVFSLSSLRTIDDDGVTFREPKSGALVRFTPEHAVAVQNALGADVIMAFDECPPYPADREQVEG AVERTLRWFERCVEAHRRSDQALFGIVQGGVWPDLRRRCAEGLVAADLPGYAIGGVSVGEPQTLIERVVRVTAPLLPEHK PRYLMGVGTFREMAQAVAVGVDLFDCVMPTRVARHGSALLLGTGGDRRINLKNAQFRRDYEPLDCVCPCYTCRHFSRAYL AHLVRSEEILAMTLLSIHNVATLTRFAALLRCAIATGSFAQEFAHYLQSGPEPVLSN
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family
Homologues:
Organism=Homo sapiens, GI13654276, Length=346, Percent_Identity=46.5317919075145, Blast_Score=318, Evalue=4e-87, Organism=Escherichia coli, GI1786607, Length=374, Percent_Identity=47.5935828877005, Blast_Score=349, Evalue=2e-97, Organism=Caenorhabditis elegans, GI17544680, Length=371, Percent_Identity=40.9703504043127, Blast_Score=293, Evalue=1e-79, Organism=Caenorhabditis elegans, GI25146502, Length=260, Percent_Identity=24.6153846153846, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI19920510, Length=356, Percent_Identity=46.9101123595506, Blast_Score=329, Evalue=2e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TGT_GLOVI (Q7NMG4)
Other databases:
- EMBL: BA000045 - RefSeq: NP_923748.1 - ProteinModelPortal: Q7NMG4 - SMR: Q7NMG4 - GeneID: 2599322 - GenomeReviews: BA000045_GR - KEGG: gvi:glr0802 - NMPDR: fig|251221.1.peg.802 - HOGENOM: HBG629929 - OMA: RCIAAHK - BioCyc: GVIO251221:GLR0802-MONOMER - BRENDA: 2.4.2.29 - HAMAP: MF_00168 - InterPro: IPR004803 - InterPro: IPR002616 - Gene3D: G3DSA:3.20.20.105 - PANTHER: PTHR11962 - TIGRFAMs: TIGR00430 - TIGRFAMs: TIGR00449
Pfam domain/function: PF01702 TGT; SSF51713 tRNA_ribo_trans
EC number: =2.4.2.29
Molecular weight: Translated: 41054; Mature: 40923
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: ACT_SITE 93-93 BINDING 94-94
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASFAFTIEHRDGEARAGTFATPHGPVYTPCFMPVGTQATVKTLTPAQLAETGAQMILA CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCEEEE NTYHLSLQPGADIVAGAGGLHGFMQWPGPILTDSGGFQVFSLSSLRTIDDDGVTFREPKS EEEEEEECCCCCEEECCCCCCHHHHCCCCEEECCCCEEEEEECCCCEECCCCCEEECCCC GALVRFTPEHAVAVQNALGADVIMAFDECPPYPADREQVEGAVERTLRWFERCVEAHRRS CCEEEECCHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC DQALFGIVQGGVWPDLRRRCAEGLVAADLPGYAIGGVSVGEPQTLIERVVRVTAPLLPEH CHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCC KPRYLMGVGTFREMAQAVAVGVDLFDCVMPTRVARHGSALLLGTGGDRRINLKNAQFRRD CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCHHHCC YEPLDCVCPCYTCRHFSRAYLAHLVRSEEILAMTLLSIHNVATLTRFAALLRCAIATGSF CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AQEFAHYLQSGPEPVLSN HHHHHHHHHCCCCCCCCC >Mature Secondary Structure TASFAFTIEHRDGEARAGTFATPHGPVYTPCFMPVGTQATVKTLTPAQLAETGAQMILA CCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCEEEE NTYHLSLQPGADIVAGAGGLHGFMQWPGPILTDSGGFQVFSLSSLRTIDDDGVTFREPKS EEEEEEECCCCCEEECCCCCCHHHHCCCCEEECCCCEEEEEECCCCEECCCCCEEECCCC GALVRFTPEHAVAVQNALGADVIMAFDECPPYPADREQVEGAVERTLRWFERCVEAHRRS CCEEEECCHHHHHHHHHCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC DQALFGIVQGGVWPDLRRRCAEGLVAADLPGYAIGGVSVGEPQTLIERVVRVTAPLLPEH CHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCC KPRYLMGVGTFREMAQAVAVGVDLFDCVMPTRVARHGSALLLGTGGDRRINLKNAQFRRD CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCHHHCC YEPLDCVCPCYTCRHFSRAYLAHLVRSEEILAMTLLSIHNVATLTRFAALLRCAIATGSF CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH AQEFAHYLQSGPEPVLSN HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14621292