Click here to switch to the map view.

The map label for this gene is rpmF

Identifier: 37520361

GI number: 37520361

Start: 843983

End: 844168

Strand: Reverse

Name: rpmF

Synonym: gvip091

Alternate gene names: 37520361

Gene position: 844168-843983 (Counterclockwise)

Preceding gene: 37520363

Following gene: 37520357

Centisome position: 18.12

GC content: 58.06

Gene sequence:

>186_bases
ATGGCTCAGCCAAAGAAAAAGACCTCCAACGCCAAGCGGGATCAGCGCCGCGCCACCTGGAAGCGCAAAGCGCGTGTGCA
GGCTGAAAAAGCCCTTGCCCTCGGCAAGTCGATCCTCTCGGGCAACAACACGGGTTTCTACTACCCGCAGCTCGAAGCAG
AGGAAGAAGAGCAAGCAGAAGAGTAG

Upstream 100 bases:

>100_bases
TGCTCCTGGTCGGGGGCAGTGGTGTTTGGTGAGTTTACGGGCGATCAGCGGTGCGCTATCATAAGAAAGCTTTTTTAGCG
CACCTCGGAATTTACTAGCC

Downstream 100 bases:

>100_bases
TCGACGACGACCTCCGACAATCGACTCTCCGCTCGGGGCAGCCCTCCAGGGCTGCCCCTTATGTTGTGGGTTTTCAGGCT
TCGGCGAGCAGTTCTGCGAC

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MAQPKKKTSNAKRDQRRATWKRKARVQAEKALALGKSILSGNNTGFYYPQLEAEEEEQAEE

Sequences:

>Translated_61_residues
MAQPKKKTSNAKRDQRRATWKRKARVQAEKALALGKSILSGNNTGFYYPQLEAEEEEQAEE
>Mature_60_residues
AQPKKKTSNAKRDQRRATWKRKARVQAEKALALGKSILSGNNTGFYYPQLEAEEEEQAEE

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_GLOVI (Q7NMH4)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_923738.1
- ProteinModelPortal:   Q7NMH4
- SMR:   Q7NMH4
- GeneID:   2599312
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.792
- HOGENOM:   HBG621788
- OMA:   TGRSTFV
- ProtClustDB:   PRK01110
- BioCyc:   GVIO251221:GSL0792-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p

EC number: NA

Molecular weight: Translated: 6981; Mature: 6850

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQPKKKTSNAKRDQRRATWKRKARVQAEKALALGKSILSGNNTGFYYPQLEAEEEEQAE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC
E
C
>Mature Secondary Structure 
AQPKKKTSNAKRDQRRATWKRKARVQAEKALALGKSILSGNNTGFYYPQLEAEEEEQAE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292