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The map label for this gene is ddrA [H]

Identifier: 37520281

GI number: 37520281

Start: 755244

End: 756011

Strand: Direct

Name: ddrA [H]

Synonym: glr0712

Alternate gene names: 37520281

Gene position: 755244-756011 (Clockwise)

Preceding gene: 37520279

Following gene: 37520282

Centisome position: 16.21

GC content: 64.97

Gene sequence:

>768_bases
ATGGAACGCGAAATTGCCAGTCTTGCTTTGGTCGAACCGTTGATCGACAAGGTGCAGATCAAGGCCCAGGCCCTCAGCAG
CGACCAGAGCCGGGCGATGGCCGTGGCTTACCTCGAAGCGCGCGATGTCGCCCAGCGCCTCGACGATGTGTGCGGTCCGC
AAAGCTGGTCGGATACTTATCAGTTGTTGCAGGCGGGGCCGTCGGAGTGGGTGGTGGAGTGCCGCCTGAGCGTCCACCCG
CCGGGCGAGGGCGCCCGCCCGGTGACCAAGTGCGACGTGGGCCTGGGCGAAGATGCCAAGGCCGCCTACTCCGACGCCTT
CAAGCGGGCGGCGGTCAAATTCGGCCTCGGCCGATTTCTCTACACCCTGCCCAAAGTCTGGGGCGATTACGACAGCGCCA
AGCGCCGCTTCAGCGAGCCCGCGGCGGTGCGTGCCCAGATGCTTGCCGCTTTTAGCGGTCGGCCGGAAGGGGGGGCTTCT
CCCAGTACCGTCGCCAAAGAATCCCCCCACCTGAGCGAGAAGCAACTCCACTGGCTCAGCGAGGATCTGCTGCGTCGTCC
GGGCGTTGAGGCGTTGTTTGTCGAGCACTTCGAGAAGATCGAAAGCCTCTCCAAGGCAAAGCGCGCCCTGGGCTACTTGC
TCAGCGAGACCAAAGGCGACCTGCGCCCGCGCTTCGAGCGGGTCGGCACCACCGAGGAGTGGCGCAAATACATCGACGCG
GCCAAGCAGCTACCCATAGCACTACCGGTAGCCGCTACCGGCGTGTGA

Upstream 100 bases:

>100_bases
CCTTATTCTGGCATGTCCCCCCGACGTCGCGATCCATCGCCAGGTTGTACAAAGGTCCACAATGCGCTACAATATGGACA
AGTGAACACAGCGTGATCCT

Downstream 100 bases:

>100_bases
GATCTCGTACTTTTACGCCTTTATGAGGTCAATGCCATGTTCAAAAAACTGAGTCCCAACCTGTTTGTCGAGGACGTGGG
CCGCGCGCTCGATTTTTACG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA damage response protein A [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MEREIASLALVEPLIDKVQIKAQALSSDQSRAMAVAYLEARDVAQRLDDVCGPQSWSDTYQLLQAGPSEWVVECRLSVHP
PGEGARPVTKCDVGLGEDAKAAYSDAFKRAAVKFGLGRFLYTLPKVWGDYDSAKRRFSEPAAVRAQMLAAFSGRPEGGAS
PSTVAKESPHLSEKQLHWLSEDLLRRPGVEALFVEHFEKIESLSKAKRALGYLLSETKGDLRPRFERVGTTEEWRKYIDA
AKQLPIALPVAATGV

Sequences:

>Translated_255_residues
MEREIASLALVEPLIDKVQIKAQALSSDQSRAMAVAYLEARDVAQRLDDVCGPQSWSDTYQLLQAGPSEWVVECRLSVHP
PGEGARPVTKCDVGLGEDAKAAYSDAFKRAAVKFGLGRFLYTLPKVWGDYDSAKRRFSEPAAVRAQMLAAFSGRPEGGAS
PSTVAKESPHLSEKQLHWLSEDLLRRPGVEALFVEHFEKIESLSKAKRALGYLLSETKGDLRPRFERVGTTEEWRKYIDA
AKQLPIALPVAATGV
>Mature_255_residues
MEREIASLALVEPLIDKVQIKAQALSSDQSRAMAVAYLEARDVAQRLDDVCGPQSWSDTYQLLQAGPSEWVVECRLSVHP
PGEGARPVTKCDVGLGEDAKAAYSDAFKRAAVKFGLGRFLYTLPKVWGDYDSAKRRFSEPAAVRAQMLAAFSGRPEGGAS
PSTVAKESPHLSEKQLHWLSEDLLRRPGVEALFVEHFEKIESLSKAKRALGYLLSETKGDLRPRFERVGTTEEWRKYIDA
AKQLPIALPVAATGV

Specific function: ssDNA-binding protein that contributes to the ionizing radiation resistance of D.deserti. Plays a role in DNA repair and genome reconstitution, in a RecA-independent process, since DdrA is essential for recovery from severe genomic fragmentation as a resu

COG id: COG4712

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RAD52 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007232 [H]

Pfam domain/function: PF04098 Rad52_Rad22 [H]

EC number: NA

Molecular weight: Translated: 28083; Mature: 28083

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEREIASLALVEPLIDKVQIKAQALSSDQSRAMAVAYLEARDVAQRLDDVCGPQSWSDTY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
QLLQAGPSEWVVECRLSVHPPGEGARPVTKCDVGLGEDAKAAYSDAFKRAAVKFGLGRFL
HHHHCCCCCEEEEEEEEECCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YTLPKVWGDYDSAKRRFSEPAAVRAQMLAAFSGRPEGGASPSTVAKESPHLSEKQLHWLS
HHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHHH
EDLLRRPGVEALFVEHFEKIESLSKAKRALGYLLSETKGDLRPRFERVGTTEEWRKYIDA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
AKQLPIALPVAATGV
HHHCCEECCCCCCCC
>Mature Secondary Structure
MEREIASLALVEPLIDKVQIKAQALSSDQSRAMAVAYLEARDVAQRLDDVCGPQSWSDTY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
QLLQAGPSEWVVECRLSVHPPGEGARPVTKCDVGLGEDAKAAYSDAFKRAAVKFGLGRFL
HHHHCCCCCEEEEEEEEECCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YTLPKVWGDYDSAKRRFSEPAAVRAQMLAAFSGRPEGGASPSTVAKESPHLSEKQLHWLS
HHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCHHHHHHHH
EDLLRRPGVEALFVEHFEKIESLSKAKRALGYLLSETKGDLRPRFERVGTTEEWRKYIDA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
AKQLPIALPVAATGV
HHHCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA