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The map label for this gene is 37520262

Identifier: 37520262

GI number: 37520262

Start: 738926

End: 740482

Strand: Reverse

Name: 37520262

Synonym: gll0693

Alternate gene names: NA

Gene position: 740482-738926 (Counterclockwise)

Preceding gene: 37520263

Following gene: 37520260

Centisome position: 15.89

GC content: 61.08

Gene sequence:

>1557_bases
ATGGAGAATTTTGATTTTGTCGTACTCGGAGCGGGACTGGGAGGACTCTCGGCGGCAGCCTGCCTTACCCGCCAGGGACA
CCGCGTCGCCGTCCTCGAACAACACTATCTGCCCGGCGGCTGTTGTCATACGTTTGACTACGGAGACTACCGCTTTTGTG
CCGATGTGCACTATGTCTCCCAGTGCGCCCCGGAGCAGACCATCGGTCAGTTTCTGCGCCACATCGACCGGCAAATCGAA
TTTAATTCCCTCGATCCCGAGTGCATCGACCGGGTGGTGACACCGGAGGCCGACTTTGCCATTCCCCTCGGTTGGGAGCG
ATTGCGCGAGCGGCTCATCGCGACTTTCCCCGAGGAGACCGTCGCCATCCGTCGCTACTGCGATGCGATCAGCGGGTTGC
ACGAGGAGATGCGCGCACTGCTGCGCGAAGTCAACTGGTTCGATCAAAAATGGTCCGACTGGTTAAAGTTGCCCAAATAC
TGGAATTTATTCGCCAGGCGCCACTGGACGCTGCAGGATCTTTACGACGAAGTGGGTCTCTCGCCAAAGTTGCAGGCGAT
CCTGGCGGGCCAGAGCGGCGATTACGCCCTGCCGCCGGCGGAGATAGCCCTTTATACCCATACCTCACTAGTACGCGACT
ACGCCGAAGGCGCCTATTACCCCCGGCACCACTTCAAGCACTTCGTCGATACGATCGCATCGGCGATTGTCGAGGGCGGC
GGGGCGGTGCACTACCGAACACCCGTCGAGCAGATCCACATCAAAGATCACCGCGTGGACGGGATAGTGGCCGCCGGGAA
GCTCTACCGGGCCGCCGCCTACATCAGCGATCTCGATCCGAAGCTCACGGTGGGGTTGATGGACGATCCCACCGCCCTGA
GCGAACGGGAGCGGCAGCGGCTGACCGGCTACGAGTACTCGGCGAGTGCCTTCAATGTCTATCTGGGTCTGGATAAAACC
TTCGACCCAAGCCGCTACGGCATCGGCAACTGGAATATCTGGTACTACCCGGACGGGGATCTCAACGGCGCCTACCGCCG
CCAACTCACAGACGACCTTGAGCGGCCCTGGATCTTCCTATCCTGTCCGACGCTCAAATCGAACGAACCGGGCATGGCCC
CGGCGGGCAACCATGTGCTGGAAATTGCCACCGTCTGCGCCTACGCGCCATTTAAGCAACTGCGCGAGACTAAGCCCGAG
GCGTACAAAGCGCGCAAGCGCGAGGTCTACCGGCAGGTGATGGAAAGCACCCGCGACTTGATCCCCGACATCGACAAATA
CGTGCGGATGAAAATTTTCGGCACGCCCACCACCAGCGAGTTCTATCTCGGCCAACCCGAGGGCAACATCTACGGCGCCA
AGCTCATCCCCAGCCAGGTGGGCCTGCACCGCCTGGGTTACCGCACGGAGTTGCCGAATTTGTTTCTAGTCGGAGCCAGC
GCCGGCTACCCGAGCGTGCCGGGGGTGATCGGCAACGGCATGGACGTAGCACAACTGCTCACCGGCCAACCTATCCGAAG
CCGACCGGGCTCCGCCCGGCCACTGGTGCGTAGTTAG

Upstream 100 bases:

>100_bases
TCGAAATAAACTCGTCCTTGAATCCGAATCGCCCGCCAGTGGTGCCGGGGATAGGAACGGACTGTGCGTATAATCTCTGC
CTCAGGTTATGGAGGTAGTG

Downstream 100 bases:

>100_bases
AGAGGTATCGGGTGTTAGGTGTCCCGGCCGGCAGCACCCTTCATGGGCAACAGCTTCCGTTCTGGCACCCGGCACCTTGA
TGCGTCAGCATCTCAAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: All-Trans-Retinol; Amine Oxidase; Carotene Isomerase; Phytoene Dehydrogenase; Phytoene Dehydrogenase-Like Protein; Phytoene Dehydrogenase-Related Protein; Squalene Synthase; Carotenoid Isomerase; Phytoene Dehydrogenase And Related Protein; FAD-Dependent Oxidoreductase; Dehydrogenase-Related Protein; Phytoene Dehydrogenase Or ; Phytoene Desaturase; Amine Oxidase Flavin-Containing

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MENFDFVVLGAGLGGLSAAACLTRQGHRVAVLEQHYLPGGCCHTFDYGDYRFCADVHYVSQCAPEQTIGQFLRHIDRQIE
FNSLDPECIDRVVTPEADFAIPLGWERLRERLIATFPEETVAIRRYCDAISGLHEEMRALLREVNWFDQKWSDWLKLPKY
WNLFARRHWTLQDLYDEVGLSPKLQAILAGQSGDYALPPAEIALYTHTSLVRDYAEGAYYPRHHFKHFVDTIASAIVEGG
GAVHYRTPVEQIHIKDHRVDGIVAAGKLYRAAAYISDLDPKLTVGLMDDPTALSERERQRLTGYEYSASAFNVYLGLDKT
FDPSRYGIGNWNIWYYPDGDLNGAYRRQLTDDLERPWIFLSCPTLKSNEPGMAPAGNHVLEIATVCAYAPFKQLRETKPE
AYKARKREVYRQVMESTRDLIPDIDKYVRMKIFGTPTTSEFYLGQPEGNIYGAKLIPSQVGLHRLGYRTELPNLFLVGAS
AGYPSVPGVIGNGMDVAQLLTGQPIRSRPGSARPLVRS

Sequences:

>Translated_518_residues
MENFDFVVLGAGLGGLSAAACLTRQGHRVAVLEQHYLPGGCCHTFDYGDYRFCADVHYVSQCAPEQTIGQFLRHIDRQIE
FNSLDPECIDRVVTPEADFAIPLGWERLRERLIATFPEETVAIRRYCDAISGLHEEMRALLREVNWFDQKWSDWLKLPKY
WNLFARRHWTLQDLYDEVGLSPKLQAILAGQSGDYALPPAEIALYTHTSLVRDYAEGAYYPRHHFKHFVDTIASAIVEGG
GAVHYRTPVEQIHIKDHRVDGIVAAGKLYRAAAYISDLDPKLTVGLMDDPTALSERERQRLTGYEYSASAFNVYLGLDKT
FDPSRYGIGNWNIWYYPDGDLNGAYRRQLTDDLERPWIFLSCPTLKSNEPGMAPAGNHVLEIATVCAYAPFKQLRETKPE
AYKARKREVYRQVMESTRDLIPDIDKYVRMKIFGTPTTSEFYLGQPEGNIYGAKLIPSQVGLHRLGYRTELPNLFLVGAS
AGYPSVPGVIGNGMDVAQLLTGQPIRSRPGSARPLVRS
>Mature_518_residues
MENFDFVVLGAGLGGLSAAACLTRQGHRVAVLEQHYLPGGCCHTFDYGDYRFCADVHYVSQCAPEQTIGQFLRHIDRQIE
FNSLDPECIDRVVTPEADFAIPLGWERLRERLIATFPEETVAIRRYCDAISGLHEEMRALLREVNWFDQKWSDWLKLPKY
WNLFARRHWTLQDLYDEVGLSPKLQAILAGQSGDYALPPAEIALYTHTSLVRDYAEGAYYPRHHFKHFVDTIASAIVEGG
GAVHYRTPVEQIHIKDHRVDGIVAAGKLYRAAAYISDLDPKLTVGLMDDPTALSERERQRLTGYEYSASAFNVYLGLDKT
FDPSRYGIGNWNIWYYPDGDLNGAYRRQLTDDLERPWIFLSCPTLKSNEPGMAPAGNHVLEIATVCAYAPFKQLRETKPE
AYKARKREVYRQVMESTRDLIPDIDKYVRMKIFGTPTTSEFYLGQPEGNIYGAKLIPSQVGLHRLGYRTELPNLFLVGAS
AGYPSVPGVIGNGMDVAQLLTGQPIRSRPGSARPLVRS

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI203098013, Length=506, Percent_Identity=25.4940711462451, Blast_Score=108, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58520; Mature: 58520

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENFDFVVLGAGLGGLSAAACLTRQGHRVAVLEQHYLPGGCCHTFDYGDYRFCADVHYVS
CCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCEEEEHHHHHHH
QCAPEQTIGQFLRHIDRQIEFNSLDPECIDRVVTPEADFAIPLGWERLRERLIATFPEET
HCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCHHH
VAIRRYCDAISGLHEEMRALLREVNWFDQKWSDWLKLPKYWNLFARRHWTLQDLYDEVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCC
SPKLQAILAGQSGDYALPPAEIALYTHTSLVRDYAEGAYYPRHHFKHFVDTIASAIVEGG
CCCEEEEEECCCCCCCCCCHHEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
GAVHYRTPVEQIHIKDHRVDGIVAAGKLYRAAAYISDLDPKLTVGLMDDPTALSERERQR
CEEEEECCHHHEEECCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
LTGYEYSASAFNVYLGLDKTFDPSRYGIGNWNIWYYPDGDLNGAYRRQLTDDLERPWIFL
HCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEE
SCPTLKSNEPGMAPAGNHVLEIATVCAYAPFKQLRETKPEAYKARKREVYRQVMESTRDL
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IPDIDKYVRMKIFGTPTTSEFYLGQPEGNIYGAKLIPSQVGLHRLGYRTELPNLFLVGAS
CCCHHHHEEEEEECCCCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCCCCCCEEEEECC
AGYPSVPGVIGNGMDVAQLLTGQPIRSRPGSARPLVRS
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MENFDFVVLGAGLGGLSAAACLTRQGHRVAVLEQHYLPGGCCHTFDYGDYRFCADVHYVS
CCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCEEEEHHHHHHH
QCAPEQTIGQFLRHIDRQIEFNSLDPECIDRVVTPEADFAIPLGWERLRERLIATFPEET
HCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCHHH
VAIRRYCDAISGLHEEMRALLREVNWFDQKWSDWLKLPKYWNLFARRHWTLQDLYDEVGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCC
SPKLQAILAGQSGDYALPPAEIALYTHTSLVRDYAEGAYYPRHHFKHFVDTIASAIVEGG
CCCEEEEEECCCCCCCCCCHHEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
GAVHYRTPVEQIHIKDHRVDGIVAAGKLYRAAAYISDLDPKLTVGLMDDPTALSERERQR
CEEEEECCHHHEEECCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
LTGYEYSASAFNVYLGLDKTFDPSRYGIGNWNIWYYPDGDLNGAYRRQLTDDLERPWIFL
HCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEE
SCPTLKSNEPGMAPAGNHVLEIATVCAYAPFKQLRETKPEAYKARKREVYRQVMESTRDL
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IPDIDKYVRMKIFGTPTTSEFYLGQPEGNIYGAKLIPSQVGLHRLGYRTELPNLFLVGAS
CCCHHHHEEEEEECCCCCCCEEEECCCCCEEEEEECHHHHHHHHHCCCCCCCCEEEEECC
AGYPSVPGVIGNGMDVAQLLTGQPIRSRPGSARPLVRS
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA