| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37520259
Identifier: 37520259
GI number: 37520259
Start: 737087
End: 737641
Strand: Direct
Name: 37520259
Synonym: glr0690
Alternate gene names: NA
Gene position: 737087-737641 (Clockwise)
Preceding gene: 37520258
Following gene: 37520261
Centisome position: 15.82
GC content: 64.68
Gene sequence:
>555_bases ATGTTCACAAAAATCCTCGTCGCCCTAGATCAGTCTTCCAGCAACGAACTGGTCTTCGAGAAAGCCTTTGCCCTCGCCCG CCTCGGCGGAGGGTCGCTGATGCTGATGCACGTGCTGTCGGGGGACGAAGACAACAGCCCCGGCCTGGTCGTTCCGGCGA TCACCGACTTCCATCCGCTCAGTTTCGACGACGAGACCCTGGCGTTTTATCGCCGGGAGTGGGAGCGCTACGAGCAGTTG GGGCGGGCGATGCTCCAGATGTTCGCCGAGCGGGCCGCCGCCGTCGGGGTCATTGCCGAATTTAGCCAGAGCGCCGGCAG CCCCGGCCCGCAGATCTGCCAGTTGGCCCGCGCCTGGAGCGCCGATTTGATCGTTACCGGGCGGCGGGGACGGCGCGGCA TCAGCGAGATGCTTCTAGGCAGCATCAGCAACTACGTTCTGCACCACGCCCCCTGCTCGGTGCTGGTGGTTACCGGTGCG GAGGATGAGGACAAACCCTTGCCTATTGAGGCCGGTCTGCAGAAGCCTGCCACTCGTCGGGGGCGAGCGCCCTGA
Upstream 100 bases:
>100_bases GTGCTGCCTGTCACCCAGGCGGTGCGGGTGCGCACCGGCGAGTGCGACCTGGAGGCGGTCCGCTTCGAGAGTCCGGCAGT CCTGATTCACTGAGGGCACC
Downstream 100 bases:
>100_bases GCGACAGGGCGTGAATTGCGCTTCCCATCTCGGCGGCGAGCGCTTCGTAGACCAGCCGGTGGCGGCGGATCGCAGGCAAA CCGCCGAAGCGCTCCGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: USP Sll1388 [H]
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MFTKILVALDQSSSNELVFEKAFALARLGGGSLMLMHVLSGDEDNSPGLVVPAITDFHPLSFDDETLAFYRREWERYEQL GRAMLQMFAERAAAVGVIAEFSQSAGSPGPQICQLARAWSADLIVTGRRGRRGISEMLLGSISNYVLHHAPCSVLVVTGA EDEDKPLPIEAGLQKPATRRGRAP
Sequences:
>Translated_184_residues MFTKILVALDQSSSNELVFEKAFALARLGGGSLMLMHVLSGDEDNSPGLVVPAITDFHPLSFDDETLAFYRREWERYEQL GRAMLQMFAERAAAVGVIAEFSQSAGSPGPQICQLARAWSADLIVTGRRGRRGISEMLLGSISNYVLHHAPCSVLVVTGA EDEDKPLPIEAGLQKPATRRGRAP >Mature_184_residues MFTKILVALDQSSSNELVFEKAFALARLGGGSLMLMHVLSGDEDNSPGLVVPAITDFHPLSFDDETLAFYRREWERYEQL GRAMLQMFAERAAAVGVIAEFSQSAGSPGPQICQLARAWSADLIVTGRRGRRGISEMLLGSISNYVLHHAPCSVLVVTGA EDEDKPLPIEAGLQKPATRRGRAP
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 20013; Mature: 20013
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTKILVALDQSSSNELVFEKAFALARLGGGSLMLMHVLSGDEDNSPGLVVPAITDFHPL CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCC SFDDETLAFYRREWERYEQLGRAMLQMFAERAAAVGVIAEFSQSAGSPGPQICQLARAWS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC ADLIVTGRRGRRGISEMLLGSISNYVLHHAPCSVLVVTGAEDEDKPLPIEAGLQKPATRR CCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCC GRAP CCCC >Mature Secondary Structure MFTKILVALDQSSSNELVFEKAFALARLGGGSLMLMHVLSGDEDNSPGLVVPAITDFHPL CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCC SFDDETLAFYRREWERYEQLGRAMLQMFAERAAAVGVIAEFSQSAGSPGPQICQLARAWS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC ADLIVTGRRGRRGISEMLLGSISNYVLHHAPCSVLVVTGAEDEDKPLPIEAGLQKPATRR CCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCC GRAP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]