| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yunF [H]
Identifier: 37520252
GI number: 37520252
Start: 730637
End: 731512
Strand: Reverse
Name: yunF [H]
Synonym: gll0683
Alternate gene names: 37520252
Gene position: 731512-730637 (Counterclockwise)
Preceding gene: 37520254
Following gene: 37520251
Centisome position: 15.7
GC content: 61.76
Gene sequence:
>876_bases ATGGCTTCGATGTCCGAGGACACACTCATTTACGTCGGCTGCCAGGGCTGGCGCTACCCGGATTGGCGGTTGGCTTCTGC GGAAGCGGTGGGCGATCTGAGTGCCCCGTTCTACCCGCCCAGGCTGCCCGCCGCCCGCGAACTGAAGCATTACGCCCGCA CATTCGATCTGGTGGAGGTTGATTCGACCTTTTATGCGGTTCCTCAGATTCGGGTGGTCAAGAACTGGGCGACCCAGGTG CCTGAGACCTTTCGCTTTACCCTGAAGTTGCCCCGCACCCTTACCCACGAGTACCGTCTTGCGCGGGGAAGGGCGACCCT TTCGGCCTTTTGTGAATGCGCCCGCCCCTTGGGAGTCCAATTGGCAGCTATTCTCATCCAGTTGCCTCCGTCATTTGCAA CGGACGAATTTGCGGCGCTGGAGCGCTTTTTGCCCCATCTGCCCGCGGATTTGCCTTTTGCCGTTGAATTTCGCGATCCT GCCTGGCTCAGTGAGCGCACGGTCGAACTGCTGGCGGCCCACCGGATCGCCCTGACCCTCGGGGATACCCCCTGGATACC GACACCACTGGCGCTCGCCTGGCTCGACAGGCTACCTACCGACTGGCTCTATCTACGGCTGATGGGATCCAAATCCAACG GTCTGGAGCACTTTACCCACCGGCAATTCGACCGCACGGACACCCTCGATGCGTGGGCGGCGGCCGTTTGGCGCCTGGCG GAAGGCGGCAAACGTGTCTATGTGCTGCTTGACAACCATTTCGAAGGTTTCTCGCCGGGGTCGGCGACGCTGCTTGTGCG CAAATTGGGGCTGGCAGAGCGCCCCTTTCCCCACGACTGCCCTGCCGAAAGCGAGCAACTCGGCCTCGAATGGTAG
Upstream 100 bases:
>100_bases GCAGAACGGTCGCCATTATCCGACATGAATGGACCACAGGCGATCCTATCAGCCCGACGGCTAAGATCTGGGGCAAGGCA AGTGCACGTTCCACCGGGGC
Downstream 100 bases:
>100_bases AGCGGTTCTCGAAGGACTAGACCAAAAGCCCGATCGATTCGCCGGGGGGAGGCGCAAGATGGTTTTGGGTGTTTTGCTTA CAGGTAAGGCGCGATATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MASMSEDTLIYVGCQGWRYPDWRLASAEAVGDLSAPFYPPRLPAARELKHYARTFDLVEVDSTFYAVPQIRVVKNWATQV PETFRFTLKLPRTLTHEYRLARGRATLSAFCECARPLGVQLAAILIQLPPSFATDEFAALERFLPHLPADLPFAVEFRDP AWLSERTVELLAAHRIALTLGDTPWIPTPLALAWLDRLPTDWLYLRLMGSKSNGLEHFTHRQFDRTDTLDAWAAAVWRLA EGGKRVYVLLDNHFEGFSPGSATLLVRKLGLAERPFPHDCPAESEQLGLEW
Sequences:
>Translated_291_residues MASMSEDTLIYVGCQGWRYPDWRLASAEAVGDLSAPFYPPRLPAARELKHYARTFDLVEVDSTFYAVPQIRVVKNWATQV PETFRFTLKLPRTLTHEYRLARGRATLSAFCECARPLGVQLAAILIQLPPSFATDEFAALERFLPHLPADLPFAVEFRDP AWLSERTVELLAAHRIALTLGDTPWIPTPLALAWLDRLPTDWLYLRLMGSKSNGLEHFTHRQFDRTDTLDAWAAAVWRLA EGGKRVYVLLDNHFEGFSPGSATLLVRKLGLAERPFPHDCPAESEQLGLEW >Mature_290_residues ASMSEDTLIYVGCQGWRYPDWRLASAEAVGDLSAPFYPPRLPAARELKHYARTFDLVEVDSTFYAVPQIRVVKNWATQVP ETFRFTLKLPRTLTHEYRLARGRATLSAFCECARPLGVQLAAILIQLPPSFATDEFAALERFLPHLPADLPFAVEFRDPA WLSERTVELLAAHRIALTLGDTPWIPTPLALAWLDRLPTDWLYLRLMGSKSNGLEHFTHRQFDRTDTLDAWAAAVWRLAE GGKRVYVLLDNHFEGFSPGSATLLVRKLGLAERPFPHDCPAESEQLGLEW
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
Organism=Escherichia coli, GI1788175, Length=158, Percent_Identity=31.0126582278481, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 32987; Mature: 32856
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASMSEDTLIYVGCQGWRYPDWRLASAEAVGDLSAPFYPPRLPAARELKHYARTFDLVEV CCCCCCCCEEEEECCCCCCCCCEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCEEEE DSTFYAVPQIRVVKNWATQVPETFRFTLKLPRTLTHEYRLARGRATLSAFCECARPLGVQ CCCEEECCCCEEHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHCCCHHH LAAILIQLPPSFATDEFAALERFLPHLPADLPFAVEFRDPAWLSERTVELLAAHRIALTL HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHEEEEEE GDTPWIPTPLALAWLDRLPTDWLYLRLMGSKSNGLEHFTHRQFDRTDTLDAWAAAVWRLA CCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH EGGKRVYVLLDNHFEGFSPGSATLLVRKLGLAERPFPHDCPAESEQLGLEW CCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure ASMSEDTLIYVGCQGWRYPDWRLASAEAVGDLSAPFYPPRLPAARELKHYARTFDLVEV CCCCCCCEEEEECCCCCCCCCEECCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCEEEE DSTFYAVPQIRVVKNWATQVPETFRFTLKLPRTLTHEYRLARGRATLSAFCECARPLGVQ CCCEEECCCCEEHHHHHHHCCCEEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHCCCHHH LAAILIQLPPSFATDEFAALERFLPHLPADLPFAVEFRDPAWLSERTVELLAAHRIALTL HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHEEEEEE GDTPWIPTPLALAWLDRLPTDWLYLRLMGSKSNGLEHFTHRQFDRTDTLDAWAAAVWRLA CCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH EGGKRVYVLLDNHFEGFSPGSATLLVRKLGLAERPFPHDCPAESEQLGLEW CCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]