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The map label for this gene is yjfH [C]

Identifier: 37520123

GI number: 37520123

Start: 587811

End: 588608

Strand: Reverse

Name: yjfH [C]

Synonym: gll0554

Alternate gene names: 37520123

Gene position: 588608-587811 (Counterclockwise)

Preceding gene: 37520125

Following gene: 37520122

Centisome position: 12.63

GC content: 68.8

Gene sequence:

>798_bases
ATGCTCACGAGCCTGCAAAATCCTGTGATTAAACAACTGCGCAAGTTGCATGCCGCCAAAGAGCGTCAGGCGCAGGGGCT
GTTTCTGGTCGAAGGCACCCACCCGGTGGCCGCGGCACTCGCGGGCGGCTGGGAGCTGGAGTTTGTCTGCGCTACCGAAG
CCTGGGTCGGGGAGCACCCCGCAATGCACACCGCCCTGAGCGGCCGGGCCGGCCGCTACGAGACGGTCGCACCCGCCGTT
ATCGAAGCGCTTGCCGATACCGTCCATCCAAGCGGGGTCGTTGCCGCTGTGCGCCGCCGCGCTGATGCCTGGCGCCCGCT
GCTGGAGCGTGACGTTTCACTGTTGGTTCTGGGCGAGCGGCTGCAAGATCCCGGCAACGTCGGCACGCTGGTGCGCAGTT
GCGCGGCGGTGGGTGCCGACGGTTTGGTGCTAAGCGCCGACAGCGTCGACCCGGATCATCCGAAGGTGCTGCGCGCGAGC
GCCGGGCTGTGGTTTCGCTCGCCGCCGCTGAGCGTCCCGGATTTGACCGCGTGCGTTGCGGATCTGGTGCGCCGGGGCGT
ACAGGTGCTCGCCGCCGACGCGGGGGCCGGCCGTTCGCTCTGGGAGTGCGACCTGCGTCGGCCCACAGCCTTTGTGTTGG
GCAGCGAAGGGCAGGGCCTCAGCGAGCCGTTGCGCCGGTGCCTCCCCGAGCGCGTCGGCATTCCCCTCGCCCCCGGAGTC
GAATCGCTCAATGTGGCTGTCAGCGGCGCATTGCTGTTATTTGAAGCGGCCCGTCAGCGCCGGGGCTCCTCGCACTGA

Upstream 100 bases:

>100_bases
GCATGCGTCCCCCTTGCGCTCCCCACTTCCATCTTCGGCGGTGCGCGCACCGTTGCGCCTACACCGCCGGTACAGTGGAA
GCGCCCTGCCCGCCGCTTCG

Downstream 100 bases:

>100_bases
TTGGCCCGGGGTGTGGGGCGATGGCAAGATAACGGTGTCGTCAGCCCAGCAGTGCCCAAGCATTCATGGCCGCTATCCGT
CCGATGTGCTTCGACGGAAC

Product: tRNA/rRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MLTSLQNPVIKQLRKLHAAKERQAQGLFLVEGTHPVAAALAGGWELEFVCATEAWVGEHPAMHTALSGRAGRYETVAPAV
IEALADTVHPSGVVAAVRRRADAWRPLLERDVSLLVLGERLQDPGNVGTLVRSCAAVGADGLVLSADSVDPDHPKVLRAS
AGLWFRSPPLSVPDLTACVADLVRRGVQVLAADAGAGRSLWECDLRRPTAFVLGSEGQGLSEPLRRCLPERVGIPLAPGV
ESLNVAVSGALLLFEAARQRRGSSH

Sequences:

>Translated_265_residues
MLTSLQNPVIKQLRKLHAAKERQAQGLFLVEGTHPVAAALAGGWELEFVCATEAWVGEHPAMHTALSGRAGRYETVAPAV
IEALADTVHPSGVVAAVRRRADAWRPLLERDVSLLVLGERLQDPGNVGTLVRSCAAVGADGLVLSADSVDPDHPKVLRAS
AGLWFRSPPLSVPDLTACVADLVRRGVQVLAADAGAGRSLWECDLRRPTAFVLGSEGQGLSEPLRRCLPERVGIPLAPGV
ESLNVAVSGALLLFEAARQRRGSSH
>Mature_265_residues
MLTSLQNPVIKQLRKLHAAKERQAQGLFLVEGTHPVAAALAGGWELEFVCATEAWVGEHPAMHTALSGRAGRYETVAPAV
IEALADTVHPSGVVAAVRRRADAWRPLLERDVSLLVLGERLQDPGNVGTLVRSCAAVGADGLVLSADSVDPDHPKVLRAS
AGLWFRSPPLSVPDLTACVADLVRRGVQVLAADAGAGRSLWECDLRRPTAFVLGSEGQGLSEPLRRCLPERVGIPLAPGV
ESLNVAVSGALLLFEAARQRRGSSH

Specific function: Unknown

COG id: COG0566

COG function: function code J; rRNA methylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1790623, Length=150, Percent_Identity=28, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790083, Length=162, Percent_Identity=30.8641975308642, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001537
- InterPro:   IPR013123 [H]

Pfam domain/function: PF00588 SpoU_methylase; PF08032 SpoU_sub_bind [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 28062; Mature: 28062

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSLQNPVIKQLRKLHAAKERQAQGLFLVEGTHPVAAALAGGWELEFVCATEAWVGEHP
CCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEEEEEECCHHHCCCC
AMHTALSGRAGRYETVAPAVIEALADTVHPSGVVAAVRRRADAWRPLLERDVSLLVLGER
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHH
LQDPGNVGTLVRSCAAVGADGLVLSADSVDPDHPKVLRASAGLWFRSPPLSVPDLTACVA
HCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEECCCCCCCCHHHHHHH
DLVRRGVQVLAADAGAGRSLWECDLRRPTAFVLGSEGQGLSEPLRRCLPERVGIPLAPGV
HHHHHHHHEEECCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC
ESLNVAVSGALLLFEAARQRRGSSH
HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLTSLQNPVIKQLRKLHAAKERQAQGLFLVEGTHPVAAALAGGWELEFVCATEAWVGEHP
CCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEEEEEECCHHHCCCC
AMHTALSGRAGRYETVAPAVIEALADTVHPSGVVAAVRRRADAWRPLLERDVSLLVLGER
HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHH
LQDPGNVGTLVRSCAAVGADGLVLSADSVDPDHPKVLRASAGLWFRSPPLSVPDLTACVA
HCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEECCCCCCCCHHHHHHH
DLVRRGVQVLAADAGAGRSLWECDLRRPTAFVLGSEGQGLSEPLRRCLPERVGIPLAPGV
HHHHHHHHEEECCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC
ESLNVAVSGALLLFEAARQRRGSSH
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]