| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is rhtA [H]
Identifier: 37519871
GI number: 37519871
Start: 309882
End: 312275
Strand: Reverse
Name: rhtA [H]
Synonym: gll0302
Alternate gene names: 37519871
Gene position: 312275-309882 (Counterclockwise)
Preceding gene: 37519873
Following gene: 37519869
Centisome position: 6.7
GC content: 61.65
Gene sequence:
>2394_bases ATGGATAAGTCCGGCGGCCCGCTTTGTGGCGGGCGTTTCGCTCTGTTGAACTTGGCGTTGTTTGCTGCTTGCGGTTCTCA ATTGACGGCTATGCCTGCTGATACCGGCAACGGTACTGATGCTGCCGTTGCCCACAAATCGGATCTGGCGGGGGTACACA CCGAAGTGCGCTGGCTGGCCCAGCAGGCTCCGAGTGCGCCGGTGTCAGCCGAGCCTTCCGGTTCGAGCGAGGCGCCGAAC GCAGCCTCGACGGTCGGACAGAGCCCGGCAAATAATGGCGAAGTGGGCGATTTGCTCGACGAGACGGTGGTCACCGCCAC CCGCACCCGCGAGCGCGTCCAGGACGTGCCGCGCACGGTGACGGTGGTCAGCCGCCGGCAAGTCGAGCAGCAGTCGCTGC TGACTACCAATCTCGGGGATATTTTGGGATTCACCGTACCGGGCTACAGTGCGCCCTCCGACGGCCCCGCCCGGGGCACT TACCGGGGCCGCGACGTACAGACGCTCATCGACGGCATTCCCCAAACGGGCAACTACGCCTACAGCAACCAGTTGCGCTT CATCGTGCCGGTGTCGATCGAACAGATCGAGGCGGTGGGCGGTCCCTCGGCCCTCTACGGTGACGGAGCCACCGGCGGTA CGATCAACATCCTGACGCGCAGGGGCACCGAGACTCCCCAGGCCAAGACCCGCATCGGCTTCAACCTGGGCCTCAGCAAC CTGAGCGGCGGTCCCGGTTACCTGTTCGAGCAGTTTGCCTCGGGCAAAGCGGGGGCTTTCGACTACGCAATTACCGCCAG CTACACCGGGTTGGGCAGCGTCTACGACGCGCGGGGCGCTCAGATTCCCAACGAATGGTTCGGGACCCTGGGCAACACCA ACACCTACAACCTCTACGGCAAGTTTGGCCTCGATCTGGGGGCGGACCAGCGGCTGCAGTTCACCGCCGGGTATGCCAAC GATCTGACCGACCCTAACAGCATCAGCGATCCGGCCGTCACCACCAGCGGCGGCTTGCAGTTTGCCGGCGCCAAAAATGG CCGAATCCAAATCCAAAACAGCCCCTACAGCCCACAACCCACCAAGCGCAATTTGCAGTTGGCCCTGGAGTACAACCACA ACAAGTTTCTGGGGGGAAGCAAGCTGCTTGCCCAAGCCTCCCACCGCAACTCTTTTGAGCTGACGACCGTGAACGATAGC CGCTTTACCGCCGACGGCAGCGGCGGTCCGTTCGATTCGATCAACCGCGGTGTGTGGGGCGAGTACATCACCACCGCCCG GGTGCAGGTGGAAACGCCTTTTTCCGACAACTTCAAGCTGCTGTGGGGCAGCGATTTCAAGAACGACCCGGTCGAAGCCT GGCAGCTGGAGACGTTCGATCCCAAAATTTATGACGAAAGCGGCGGCTTTATCCAGCGCCGGTCGGGAAATTTCCTCTTC AACCCGGCCTATACCCTCACCAACATCGCGGGCTTTTTGCAGGCCAACTGGAACATCAGCGATCAATGGATCATCAATGG CGGCCTGCGCTACGAAAACGTCAGCTTTAGCGTTGGTGACTTCGTCGCCTCCAATACGGGCCAATCGGTTACGGGAGGAA GCCTCAACTTCAACTCCACCGTCTTCAACCTTGGAGTTGTCTACAAACCAAGCAACGAGATCAGCTTGTTTGCCAACTTC GGCCAGGGCTTTTCGCTGCCCGTCTTCGCCAACCCCCTCACCAATGCCTCGTCGGGTTTTGCGGTTTCCAATTCGCTCAC TGCGCTCCAGCCGAAGCTGGTCGACAGCTACGAGCTCGGAGTGCGCGGCCGCTGGCGATCGATCCAGTCGTCGCTTTCGG CCTACTACACGTTTTCGTCCCTCGATGTCGGCTTTGTGCAGGTAAGCCCCACCCAATTTCAGAGCGTGCGCTCGCCCCAG CGCACCTATGGGCTGGAGGCGACCCTCTACGCCCAGCCTGGCCCCGGTTGGACCCTGGGCACGACCGCCGCCTGGGTGCA GGGCGAGCAAGATCCGTTCAACACCGGCGACTACTACCCTTTGAATTCCTACAGCGTCAACCCGCTCAAGGCGACCTTCT ACCTCGAGAATCAGACGGCGCCGGGCTGGCGCAACCGTCTGCAGGTGCTCTTCTCCGGCTACCGCGACGTGGCTTACAAC GCCATTCTGCCCACGGGCTTTCGTGTCGAGCAGGCGCCCGTGGGCAGCTACGCGACGGTCGACTACCTCAGCAGCATCCA GATGGGGGCCGGGACGCTCGAAGTCGGTGTACGCAACCTGCTCAACAACCAGTACTCGCCGGTCTACTCCCAGTACCTGT CCGGATTTAACGACCGCAACAACTTTGCCGCCCGAGGCGCCACGCTCAATGTCGCCTATAACTTTGGGTGGTAG
Upstream 100 bases:
>100_bases GTGTCCCCATCAGGTAGGGGTACCTGCGGTTGGCGAAAGGTGGCGTGTCGCTGCCCTTTGTTCTCCTTGTGATGTTCTGC AGTAAGTCTTGGAGCTCGCG
Downstream 100 bases:
>100_bases TGCCCTATCGGCGCGGCCAGAGGTAGATCCCGCCGGAGATAAGGGTCAGAGCCACCGCTGCCCAAAAGAGCACCTCGCCC CCCGGCCACAGCATGATCAA
Product: ferric aerobactin receptor
Products: NA
Alternate protein names: TonB-dependent siderophore receptor rhtA [H]
Number of amino acids: Translated: 797; Mature: 797
Protein sequence:
>797_residues MDKSGGPLCGGRFALLNLALFAACGSQLTAMPADTGNGTDAAVAHKSDLAGVHTEVRWLAQQAPSAPVSAEPSGSSEAPN AASTVGQSPANNGEVGDLLDETVVTATRTRERVQDVPRTVTVVSRRQVEQQSLLTTNLGDILGFTVPGYSAPSDGPARGT YRGRDVQTLIDGIPQTGNYAYSNQLRFIVPVSIEQIEAVGGPSALYGDGATGGTINILTRRGTETPQAKTRIGFNLGLSN LSGGPGYLFEQFASGKAGAFDYAITASYTGLGSVYDARGAQIPNEWFGTLGNTNTYNLYGKFGLDLGADQRLQFTAGYAN DLTDPNSISDPAVTTSGGLQFAGAKNGRIQIQNSPYSPQPTKRNLQLALEYNHNKFLGGSKLLAQASHRNSFELTTVNDS RFTADGSGGPFDSINRGVWGEYITTARVQVETPFSDNFKLLWGSDFKNDPVEAWQLETFDPKIYDESGGFIQRRSGNFLF NPAYTLTNIAGFLQANWNISDQWIINGGLRYENVSFSVGDFVASNTGQSVTGGSLNFNSTVFNLGVVYKPSNEISLFANF GQGFSLPVFANPLTNASSGFAVSNSLTALQPKLVDSYELGVRGRWRSIQSSLSAYYTFSSLDVGFVQVSPTQFQSVRSPQ RTYGLEATLYAQPGPGWTLGTTAAWVQGEQDPFNTGDYYPLNSYSVNPLKATFYLENQTAPGWRNRLQVLFSGYRDVAYN AILPTGFRVEQAPVGSYATVDYLSSIQMGAGTLEVGVRNLLNNQYSPVYSQYLSGFNDRNNFAARGATLNVAYNFGW
Sequences:
>Translated_797_residues MDKSGGPLCGGRFALLNLALFAACGSQLTAMPADTGNGTDAAVAHKSDLAGVHTEVRWLAQQAPSAPVSAEPSGSSEAPN AASTVGQSPANNGEVGDLLDETVVTATRTRERVQDVPRTVTVVSRRQVEQQSLLTTNLGDILGFTVPGYSAPSDGPARGT YRGRDVQTLIDGIPQTGNYAYSNQLRFIVPVSIEQIEAVGGPSALYGDGATGGTINILTRRGTETPQAKTRIGFNLGLSN LSGGPGYLFEQFASGKAGAFDYAITASYTGLGSVYDARGAQIPNEWFGTLGNTNTYNLYGKFGLDLGADQRLQFTAGYAN DLTDPNSISDPAVTTSGGLQFAGAKNGRIQIQNSPYSPQPTKRNLQLALEYNHNKFLGGSKLLAQASHRNSFELTTVNDS RFTADGSGGPFDSINRGVWGEYITTARVQVETPFSDNFKLLWGSDFKNDPVEAWQLETFDPKIYDESGGFIQRRSGNFLF NPAYTLTNIAGFLQANWNISDQWIINGGLRYENVSFSVGDFVASNTGQSVTGGSLNFNSTVFNLGVVYKPSNEISLFANF GQGFSLPVFANPLTNASSGFAVSNSLTALQPKLVDSYELGVRGRWRSIQSSLSAYYTFSSLDVGFVQVSPTQFQSVRSPQ RTYGLEATLYAQPGPGWTLGTTAAWVQGEQDPFNTGDYYPLNSYSVNPLKATFYLENQTAPGWRNRLQVLFSGYRDVAYN AILPTGFRVEQAPVGSYATVDYLSSIQMGAGTLEVGVRNLLNNQYSPVYSQYLSGFNDRNNFAARGATLNVAYNFGW >Mature_797_residues MDKSGGPLCGGRFALLNLALFAACGSQLTAMPADTGNGTDAAVAHKSDLAGVHTEVRWLAQQAPSAPVSAEPSGSSEAPN AASTVGQSPANNGEVGDLLDETVVTATRTRERVQDVPRTVTVVSRRQVEQQSLLTTNLGDILGFTVPGYSAPSDGPARGT YRGRDVQTLIDGIPQTGNYAYSNQLRFIVPVSIEQIEAVGGPSALYGDGATGGTINILTRRGTETPQAKTRIGFNLGLSN LSGGPGYLFEQFASGKAGAFDYAITASYTGLGSVYDARGAQIPNEWFGTLGNTNTYNLYGKFGLDLGADQRLQFTAGYAN DLTDPNSISDPAVTTSGGLQFAGAKNGRIQIQNSPYSPQPTKRNLQLALEYNHNKFLGGSKLLAQASHRNSFELTTVNDS RFTADGSGGPFDSINRGVWGEYITTARVQVETPFSDNFKLLWGSDFKNDPVEAWQLETFDPKIYDESGGFIQRRSGNFLF NPAYTLTNIAGFLQANWNISDQWIINGGLRYENVSFSVGDFVASNTGQSVTGGSLNFNSTVFNLGVVYKPSNEISLFANF GQGFSLPVFANPLTNASSGFAVSNSLTALQPKLVDSYELGVRGRWRSIQSSLSAYYTFSSLDVGFVQVSPTQFQSVRSPQ RTYGLEATLYAQPGPGWTLGTTAAWVQGEQDPFNTGDYYPLNSYSVNPLKATFYLENQTAPGWRNRLQVLFSGYRDVAYN AILPTGFRVEQAPVGSYATVDYLSSIQMGAGTLEVGVRNLLNNQYSPVYSQYLSGFNDRNNFAARGATLNVAYNFGW
Specific function: Receptor for the siderophore rhizobactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 85717; Mature: 85717
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSGGPLCGGRFALLNLALFAACGSQLTAMPADTGNGTDAAVAHKSDLAGVHTEVRWLA CCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHH QQAPSAPVSAEPSGSSEAPNAASTVGQSPANNGEVGDLLDETVVTATRTRERVQDVPRTV HHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHE TVVSRRQVEQQSLLTTNLGDILGFTVPGYSAPSDGPARGTYRGRDVQTLIDGIPQTGNYA EHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEE YSNQLRFIVPVSIEQIEAVGGPSALYGDGATGGTINILTRRGTETPQAKTRIGFNLGLSN ECCCEEEEEECCHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCHHHEEEEEECCCC LSGGPGYLFEQFASGKAGAFDYAITASYTGLGSVYDARGAQIPNEWFGTLGNTNTYNLYG CCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEE KFGLDLGADQRLQFTAGYANDLTDPNSISDPAVTTSGGLQFAGAKNGRIQIQNSPYSPQP EECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCEEEECCCCCEEEEECCCCCCCC TKRNLQLALEYNHNKFLGGSKLLAQASHRNSFELTTVNDSRFTADGSGGPFDSINRGVWG CCCCEEEEEEECCCEECCCHHHHHHHCCCCCEEEEEECCCEEEECCCCCCHHHHCCCCCC EYITTARVQVETPFSDNFKLLWGSDFKNDPVEAWQLETFDPKIYDESGGFIQRRSGNFLF CEEEEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEECCCCEEEECCCCEEE NPAYTLTNIAGFLQANWNISDQWIINGGLRYENVSFSVGDFVASNTGQSVTGGSLNFNST CCCHHHHHHHHHEEECCCCCCEEEEECCEEEEEEEEEHHHHHCCCCCCCCCCCCEECCCE VFNLGVVYKPSNEISLFANFGQGFSLPVFANPLTNASSGFAVSNSLTALQPKLVDSYELG EEEEEEEECCCCCEEEEEECCCCCCCCEECCCCCCCCCCEEECCCCHHCCCHHCCCEECC VRGRWRSIQSSLSAYYTFSSLDVGFVQVSPTQFQSVRSPQRTYGLEATLYAQPGPGWTLG CCCHHHHHHHHHHHEEEEECCCEEEEEECHHHHHHHCCCHHHCCCEEEEEECCCCCCCCC TTAAWVQGEQDPFNTGDYYPLNSYSVNPLKATFYLENQTAPGWRNRLQVLFSGYRDVAYN CEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH AILPTGFRVEQAPVGSYATVDYLSSIQMGAGTLEVGVRNLLNNQYSPVYSQYLSGFNDRN EECCCCCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCC NFAARGATLNVAYNFGW CEEECCEEEEEEEECCC >Mature Secondary Structure MDKSGGPLCGGRFALLNLALFAACGSQLTAMPADTGNGTDAAVAHKSDLAGVHTEVRWLA CCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHH QQAPSAPVSAEPSGSSEAPNAASTVGQSPANNGEVGDLLDETVVTATRTRERVQDVPRTV HHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHE TVVSRRQVEQQSLLTTNLGDILGFTVPGYSAPSDGPARGTYRGRDVQTLIDGIPQTGNYA EHHHHHHHHHHHHHHHCCHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEE YSNQLRFIVPVSIEQIEAVGGPSALYGDGATGGTINILTRRGTETPQAKTRIGFNLGLSN ECCCEEEEEECCHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCHHHEEEEEECCCC LSGGPGYLFEQFASGKAGAFDYAITASYTGLGSVYDARGAQIPNEWFGTLGNTNTYNLYG CCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEE KFGLDLGADQRLQFTAGYANDLTDPNSISDPAVTTSGGLQFAGAKNGRIQIQNSPYSPQP EECCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCEEEECCCCCEEEEECCCCCCCC TKRNLQLALEYNHNKFLGGSKLLAQASHRNSFELTTVNDSRFTADGSGGPFDSINRGVWG CCCCEEEEEEECCCEECCCHHHHHHHCCCCCEEEEEECCCEEEECCCCCCHHHHCCCCCC EYITTARVQVETPFSDNFKLLWGSDFKNDPVEAWQLETFDPKIYDESGGFIQRRSGNFLF CEEEEEEEEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEECCCCEEEECCCCEEE NPAYTLTNIAGFLQANWNISDQWIINGGLRYENVSFSVGDFVASNTGQSVTGGSLNFNST CCCHHHHHHHHHEEECCCCCCEEEEECCEEEEEEEEEHHHHHCCCCCCCCCCCCEECCCE VFNLGVVYKPSNEISLFANFGQGFSLPVFANPLTNASSGFAVSNSLTALQPKLVDSYELG EEEEEEEECCCCCEEEEEECCCCCCCCEECCCCCCCCCCEEECCCCHHCCCHHCCCEECC VRGRWRSIQSSLSAYYTFSSLDVGFVQVSPTQFQSVRSPQRTYGLEATLYAQPGPGWTLG CCCHHHHHHHHHHHEEEEECCCEEEEEECHHHHHHHCCCHHHCCCEEEEEECCCCCCCCC TTAAWVQGEQDPFNTGDYYPLNSYSVNPLKATFYLENQTAPGWRNRLQVLFSGYRDVAYN CEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH AILPTGFRVEQAPVGSYATVDYLSSIQMGAGTLEVGVRNLLNNQYSPVYSQYLSGFNDRN EECCCCCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCC NFAARGATLNVAYNFGW CEEECCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11274118; 11481432 [H]