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The map label for this gene is 37519767

Identifier: 37519767

GI number: 37519767

Start: 189511

End: 190407

Strand: Reverse

Name: 37519767

Synonym: gll0198

Alternate gene names: NA

Gene position: 190407-189511 (Counterclockwise)

Preceding gene: 37519768

Following gene: 37519766

Centisome position: 4.09

GC content: 52.62

Gene sequence:

>897_bases
ATGTTGATGACCGTATTTTCTTCTGCACCTGAACTTGCCCTTCTCGGATCAACCTTTGCCCAGGTCGATCCTTCAAACTT
ATCGGTCTCAGATTCGCTGACCTATGGTCAGTTCAATCTGGTTTACAACGCTTTCTCGTTTGCCATCGCGGCAATGTTCG
CATCTGCCCTCTTCTTCTTCAGCGCTCAGGCACTCGTCGGTCAACGATACCGGTTGGCCTTGCTTGTTTCAGCAATTGTT
GTGAGTATCGCTGGGTACCACTACTTTCGGATCTTCAATAGTTGGGATGCTGCCTACGTTCTGGAGAATGGCGTGTATTC
CCTGACTAGCGAAAAATTCAACGACGCCTACCGCTATGTGGATTGGCTGTTGACCGTGCCTCTGTTGCTGGTGGAGACAG
TGGCAGTGCTGACGTTGCCTGCAAAGGAGGCAAGACCCTTGCTGATCAAACTGACGGTGGCTTCAGTTCTGATGATTGCC
ACGGGCTACCCCGGCGAGATTTCTGACGACATTACGACTCGCATCATCTGGGGTACGGTCAGCACGATTCCCTTCGCCTA
CATCCTCTATGTGTTGTGGGTCGAACTGTCCAGGTCCCTTGTCCGCCAGCCCGCTGCTGTACAAACCCTGGTCCGCAACA
TGCGGTGGCTGCTGTTGCTCTCCTGGGGTGTTTACCCGATCGCATACCTTCTACCCATGCTTGGAGTATCCGGTACGTCC
GCGGCTGTCGGCGTTCAGGTTGGCTATACGATCGCAGACGTGCTGGCGAAGCCTGTATTTGGTCTTCTAGTCTTCGCGAT
TGCACTCGTGAAAACAAAAGCAGATCAAGAAAGCAGTGAACCACATGCCGCAATAGGTGCTGCTGCAAATAAATCGGGAG
GCAGTCTTATCTCCTAG

Upstream 100 bases:

>100_bases
TCGCGCACCCGTAGATTTGACGGTGCCAACCCGAAATAGTTCTTTGGATCTATGCCTTGGTTAAAGGCAGGCTCAAGTCC
ATGTTTACCACGAGGGGACG

Downstream 100 bases:

>100_bases
AAGGAAGCGGTAGCTTGGACTGCTACCTCGAAGAGGTGAAGCAAGGAGAACTGTCCCAGGGCATCTCCTTGCTTCACCTC
TTTTTTTTGGCTTCGACTGC

Product: bacterioopsin

Products: NA

Alternate protein names: GPR [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MLMTVFSSAPELALLGSTFAQVDPSNLSVSDSLTYGQFNLVYNAFSFAIAAMFASALFFFSAQALVGQRYRLALLVSAIV
VSIAGYHYFRIFNSWDAAYVLENGVYSLTSEKFNDAYRYVDWLLTVPLLLVETVAVLTLPAKEARPLLIKLTVASVLMIA
TGYPGEISDDITTRIIWGTVSTIPFAYILYVLWVELSRSLVRQPAAVQTLVRNMRWLLLLSWGVYPIAYLLPMLGVSGTS
AAVGVQVGYTIADVLAKPVFGLLVFAIALVKTKADQESSEPHAAIGAAANKSGGSLIS

Sequences:

>Translated_298_residues
MLMTVFSSAPELALLGSTFAQVDPSNLSVSDSLTYGQFNLVYNAFSFAIAAMFASALFFFSAQALVGQRYRLALLVSAIV
VSIAGYHYFRIFNSWDAAYVLENGVYSLTSEKFNDAYRYVDWLLTVPLLLVETVAVLTLPAKEARPLLIKLTVASVLMIA
TGYPGEISDDITTRIIWGTVSTIPFAYILYVLWVELSRSLVRQPAAVQTLVRNMRWLLLLSWGVYPIAYLLPMLGVSGTS
AAVGVQVGYTIADVLAKPVFGLLVFAIALVKTKADQESSEPHAAIGAAANKSGGSLIS
>Mature_298_residues
MLMTVFSSAPELALLGSTFAQVDPSNLSVSDSLTYGQFNLVYNAFSFAIAAMFASALFFFSAQALVGQRYRLALLVSAIV
VSIAGYHYFRIFNSWDAAYVLENGVYSLTSEKFNDAYRYVDWLLTVPLLLVETVAVLTLPAKEARPLLIKLTVASVLMIA
TGYPGEISDDITTRIIWGTVSTIPFAYILYVLWVELSRSLVRQPAAVQTLVRNMRWLLLLSWGVYPIAYLLPMLGVSGTS
AAVGVQVGYTIADVLAKPVFGLLVFAIALVKTKADQESSEPHAAIGAAANKSGGSLIS

Specific function: Light-driven proton pump that generates photothrophic energy [H]

COG id: COG5524

COG function: function code R; Bacteriorhodopsin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal/bacterial/fungal opsin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001425
- InterPro:   IPR017402
- InterPro:   IPR018229 [H]

Pfam domain/function: PF01036 Bac_rhodopsin [H]

EC number: NA

Molecular weight: Translated: 32289; Mature: 32289

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00950 BACTERIAL_OPSIN_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMTVFSSAPELALLGSTFAQVDPSNLSVSDSLTYGQFNLVYNAFSFAIAAMFASALFFF
CEEEEECCCCCHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SAQALVGQRYRLALLVSAIVVSIAGYHYFRIFNSWDAAYVLENGVYSLTSEKFNDAYRYV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHH
DWLLTVPLLLVETVAVLTLPAKEARPLLIKLTVASVLMIATGYPGEISDDITTRIIWGTV
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHEEEHHH
STIPFAYILYVLWVELSRSLVRQPAAVQTLVRNMRWLLLLSWGVYPIAYLLPMLGVSGTS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AAVGVQVGYTIADVLAKPVFGLLVFAIALVKTKADQESSEPHAAIGAAANKSGGSLIS
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLMTVFSSAPELALLGSTFAQVDPSNLSVSDSLTYGQFNLVYNAFSFAIAAMFASALFFF
CEEEEECCCCCHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SAQALVGQRYRLALLVSAIVVSIAGYHYFRIFNSWDAAYVLENGVYSLTSEKFNDAYRYV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHH
DWLLTVPLLLVETVAVLTLPAKEARPLLIKLTVASVLMIATGYPGEISDDITTRIIWGTV
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHEEEHHH
STIPFAYILYVLWVELSRSLVRQPAAVQTLVRNMRWLLLLSWGVYPIAYLLPMLGVSGTS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AAVGVQVGYTIADVLAKPVFGLLVFAIALVKTKADQESSEPHAAIGAAANKSGGSLIS
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10988064; 11969395; 12547799; 12206764; 12719254; 12767242; 11459054; 12682005 [H]