| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37519757
Identifier: 37519757
GI number: 37519757
Start: 177242
End: 177820
Strand: Reverse
Name: 37519757
Synonym: gll0188
Alternate gene names: NA
Gene position: 177820-177242 (Counterclockwise)
Preceding gene: 37519758
Following gene: 37519756
Centisome position: 3.82
GC content: 69.43
Gene sequence:
>579_bases GTGTCCGACACCACCCGCTCCCGCATTCTCGAAGCCGCCGAACTGCTCCTGCGCCGCCACGGTCCGGCCAAGCTCACCGT GACCGACGTGGCTCGCCACCTGGGCATGAGCCACGCCAACGTCTACCGGCATTTTGCGAGCAAAGCCGACTTGCTCGACG CCGTCGCCGAGCGCTGGCTGCACACCGTCTCAGGAGCGCTCGAACCGATCGCCCTGGCCGACGGGCCGGCGGCGGAGCGC CTGGAAGACTGGGCGGTGGGCCTCTGGCAGCAGAAGCGGCGCAAAATCAGCGACGATCCCGAGCACTTTGCGATGTACCA CGGCGTGGCCGAGGCGGCGCGCGGCGTCGTCGCCCGCCACGTCGAGACGCTGCTGGGTCAACTGGAGCGCATCCTGGCCG ACGGCGCCGCCTCAGAAGAGTTTCAGATGACCGACCCGGCGGCCGCCGCACGGGCGGTCTGGAACGCCACGGTGCGCTTT CACCACCCGCACCTGGTAACGGCAGATCCAGCCTGTGAAGCAGAACTGCGAGCCGTCCTTGCCCTGGTGACAGCCGGGCT GCGCACCGGGGCGCTCTAA
Upstream 100 bases:
>100_bases TGGCCGGGACGCGCTACAGTACGGATCAAATGGCCATGCTGGACAGCTGAGCACCGGATAAGCTTCCGGCAGTGTCCACT GGGCCGCAGCCGCCACTGCA
Downstream 100 bases:
>100_bases GGCGGGTGGAGTTGTGCCGCCGGGGAGCCAACGCTTACGCTGGGTACACTCAACGGACGCAGCGATGAACGAATTTCCCG CCGATGCCGGATTCGCCCGG
Product: TetR family transcriptional regulatory protein
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; TetR-Family Transcriptional Regulator; Trancscriptional Regulator MtrR; Regulatory Protein TetR; Tetr-Family Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSDTTRSRILEAAELLLRRHGPAKLTVTDVARHLGMSHANVYRHFASKADLLDAVAERWLHTVSGALEPIALADGPAAER LEDWAVGLWQQKRRKISDDPEHFAMYHGVAEAARGVVARHVETLLGQLERILADGAASEEFQMTDPAAAARAVWNATVRF HHPHLVTADPACEAELRAVLALVTAGLRTGAL
Sequences:
>Translated_192_residues MSDTTRSRILEAAELLLRRHGPAKLTVTDVARHLGMSHANVYRHFASKADLLDAVAERWLHTVSGALEPIALADGPAAER LEDWAVGLWQQKRRKISDDPEHFAMYHGVAEAARGVVARHVETLLGQLERILADGAASEEFQMTDPAAAARAVWNATVRF HHPHLVTADPACEAELRAVLALVTAGLRTGAL >Mature_191_residues SDTTRSRILEAAELLLRRHGPAKLTVTDVARHLGMSHANVYRHFASKADLLDAVAERWLHTVSGALEPIALADGPAAERL EDWAVGLWQQKRRKISDDPEHFAMYHGVAEAARGVVARHVETLLGQLERILADGAASEEFQMTDPAAAARAVWNATVRFH HPHLVTADPACEAELRAVLALVTAGLRTGAL
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20927; Mature: 20796
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTTRSRILEAAELLLRRHGPAKLTVTDVARHLGMSHANVYRHFASKADLLDAVAERWL CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH HTVSGALEPIALADGPAAERLEDWAVGLWQQKRRKISDDPEHFAMYHGVAEAARGVVARH HHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VETLLGQLERILADGAASEEFQMTDPAAAARAVWNATVRFHHPHLVTADPACEAELRAVL HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEEECCEEEECCCCHHHHHHHHH ALVTAGLRTGAL HHHHHHHHHCCC >Mature Secondary Structure SDTTRSRILEAAELLLRRHGPAKLTVTDVARHLGMSHANVYRHFASKADLLDAVAERWL CCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH HTVSGALEPIALADGPAAERLEDWAVGLWQQKRRKISDDPEHFAMYHGVAEAARGVVARH HHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VETLLGQLERILADGAASEEFQMTDPAAAARAVWNATVRFHHPHLVTADPACEAELRAVL HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEEECCEEEECCCCHHHHHHHHH ALVTAGLRTGAL HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA