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The map label for this gene is desA [H]

Identifier: 37519740

GI number: 37519740

Start: 161268

End: 162440

Strand: Reverse

Name: desA [H]

Synonym: gll0171

Alternate gene names: 37519740

Gene position: 162440-161268 (Counterclockwise)

Preceding gene: 37519742

Following gene: 37519738

Centisome position: 3.49

GC content: 53.2

Gene sequence:

>1173_bases
GTGGAAAACGCGGGTCTAAGCTATGTAGACCATGTTGCATTATCTGTAATTCTCCCTACGGAAAGCAATCCTATGAGCTT
TGATACTATGGTTGCGAGCTACGCAAGTGCTCGCCGCGTCAGGAAACAGCTGTCCAAGGAAGTCCGCAGGCGCTCTACAC
CCCGAGGAATAGCATCATTCGCCTTTTGTTTTGCAGTTTATTTGTTAGCATTTACAGGATTTTTGCTGTTGCCCTGGTGG
TGGGCTAAGGCGATATGTAGCATTGCGCTCGGCCTGGCAATTGCGCAGCTGTTTCACGTGGGTCACGATGCAGGTCATGG
TGTGCTCACCACAAACAGCACCCTAAATGTGTGGTTGGGTCGCGTGGCGTTTTTGCCCCTGCTGCACGCCTTCAACCTCT
GGGATGCCAACCACAATCAACTTCATCATATCTATACCAACTTTGCTCCTCTGGATCGGTTTTGGGCGCCGCTCTCCAGG
AAAGAATACGACGAGCTATCCCCGCTCCATCGCTTTGCGCAGAGGATGTACAGAAGCGGTTGGGGAAGCGGTGTTTACTA
CTTGAATATTTGGCGGCAGTTCTTGCTTGTGCCAAATCCGCTGCTCCAGGACAAAATCAAATCCACCCTGGATACCTGGT
TGGTGTTTGGTTTTGGTTCAGTGCAGATATTGCTGCTGATCTGGGTGCCAAATTGGCTGGCAGATGTGACGGGATGGCCG
GTGATGCCGTGGTGGGTCTCCATTCTCGGTGGATTGGTTGTGCCCATGCTCATCTGGAGCTGGCTGTTGGGAACGGCAAC
CTATCTGCAGCACAACCATCCGTCGATCGCCTGGTACAGCAAGTTCGAGGAATGGTCCTTCTACCGGGGTCAGGTGGGTT
CAACGGTCCATATCAAGTTGCCCGCTTTTTGGCGGCTGCTCACCTGGAATTTAATGGAACACACGGCGCACCACGTCGAT
GTCGGCATTTCGTTTGCCAAACTCAACGACGCCCAACAACTGCTCCAGAAAGCCTACGGCGAGCACATCACCGCCGATGC
GCTCTCCTGGGGCAGTTTTCTCGATACCCTCAGACGGTGCAAGCTTTACGACTACGAGAATCACCGCTGGTTGGATTTTG
ACGGCAACTCGACAATTGCCGGCACCAACCTGCGAGTTCCCGAACAGCCGTAA

Upstream 100 bases:

>100_bases
GTGCCAGCAATCAACTTTGAGCGGTCGTTACAAATTATTTCTTTCTTTGCGATTTAGTGTTGACGCAGGACAATCCGACA
TGTAAACCAATAGCAGTGTA

Downstream 100 bases:

>100_bases
TCGGGCAACGTCGGCGGGTCAATCCTGGGCTGCAACCGGCTGAGTAGCCCTTGCCGCGAGCAATTCACCCACTAGCGGAA
CGACCCAACCGGCAGCGGCG

Product: fatty acid desaturase

Products: NA

Alternate protein names: Delta(12)-desaturase [H]

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MENAGLSYVDHVALSVILPTESNPMSFDTMVASYASARRVRKQLSKEVRRRSTPRGIASFAFCFAVYLLAFTGFLLLPWW
WAKAICSIALGLAIAQLFHVGHDAGHGVLTTNSTLNVWLGRVAFLPLLHAFNLWDANHNQLHHIYTNFAPLDRFWAPLSR
KEYDELSPLHRFAQRMYRSGWGSGVYYLNIWRQFLLVPNPLLQDKIKSTLDTWLVFGFGSVQILLLIWVPNWLADVTGWP
VMPWWVSILGGLVVPMLIWSWLLGTATYLQHNHPSIAWYSKFEEWSFYRGQVGSTVHIKLPAFWRLLTWNLMEHTAHHVD
VGISFAKLNDAQQLLQKAYGEHITADALSWGSFLDTLRRCKLYDYENHRWLDFDGNSTIAGTNLRVPEQP

Sequences:

>Translated_390_residues
MENAGLSYVDHVALSVILPTESNPMSFDTMVASYASARRVRKQLSKEVRRRSTPRGIASFAFCFAVYLLAFTGFLLLPWW
WAKAICSIALGLAIAQLFHVGHDAGHGVLTTNSTLNVWLGRVAFLPLLHAFNLWDANHNQLHHIYTNFAPLDRFWAPLSR
KEYDELSPLHRFAQRMYRSGWGSGVYYLNIWRQFLLVPNPLLQDKIKSTLDTWLVFGFGSVQILLLIWVPNWLADVTGWP
VMPWWVSILGGLVVPMLIWSWLLGTATYLQHNHPSIAWYSKFEEWSFYRGQVGSTVHIKLPAFWRLLTWNLMEHTAHHVD
VGISFAKLNDAQQLLQKAYGEHITADALSWGSFLDTLRRCKLYDYENHRWLDFDGNSTIAGTNLRVPEQP
>Mature_390_residues
MENAGLSYVDHVALSVILPTESNPMSFDTMVASYASARRVRKQLSKEVRRRSTPRGIASFAFCFAVYLLAFTGFLLLPWW
WAKAICSIALGLAIAQLFHVGHDAGHGVLTTNSTLNVWLGRVAFLPLLHAFNLWDANHNQLHHIYTNFAPLDRFWAPLSR
KEYDELSPLHRFAQRMYRSGWGSGVYYLNIWRQFLLVPNPLLQDKIKSTLDTWLVFGFGSVQILLLIWVPNWLADVTGWP
VMPWWVSILGGLVVPMLIWSWLLGTATYLQHNHPSIAWYSKFEEWSFYRGQVGSTVHIKLPAFWRLLTWNLMEHTAHHVD
VGISFAKLNDAQQLLQKAYGEHITADALSWGSFLDTLRRCKLYDYENHRWLDFDGNSTIAGTNLRVPEQP

Specific function: Can introduce a second cis double bond at the Delta(12) position of fatty acid bound to membranes glycerolipids. This enzyme is involved in chilling tolerance because the phase transition temperature of lipids of cellular membranes depends on the degree o

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 44827; Mature: 44827

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENAGLSYVDHVALSVILPTESNPMSFDTMVASYASARRVRKQLSKEVRRRSTPRGIASF
CCCCCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AFCFAVYLLAFTGFLLLPWWWAKAICSIALGLAIAQLFHVGHDAGHGVLTTNSTLNVWLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHH
RVAFLPLLHAFNLWDANHNQLHHIYTNFAPLDRFWAPLSRKEYDELSPLHRFAQRMYRSG
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
WGSGVYYLNIWRQFLLVPNPLLQDKIKSTLDTWLVFGFGSVQILLLIWVPNWLADVTGWP
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCC
VMPWWVSILGGLVVPMLIWSWLLGTATYLQHNHPSIAWYSKFEEWSFYRGQVGSTVHIKL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEC
PAFWRLLTWNLMEHTAHHVDVGISFAKLNDAQQLLQKAYGEHITADALSWGSFLDTLRRC
HHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
KLYDYENHRWLDFDGNSTIAGTNLRVPEQP
CCCCCCCCEEEEECCCCEEECCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCEEEEECCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA