BacMap

Definition	Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession	NC_005125
Length	4,659,019

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The map label for this gene is ucpA [C]

Identifier: 37519684

GI number: 37519684

Start: 112414

End: 113133

Strand: Reverse

Name: ucpA [C]

Synonym: gll0115

Alternate gene names: 37519684

Gene position: 113133-112414 (Counterclockwise)

Preceding gene: 37519686

Following gene: 37519683

Centisome position: 2.43

GC content: 64.03

Gene sequence:

>720_bases
ATGCAGGGCAAGGTGGTTTTGATTACGGGTGCAAGCGGCGGGATCGGTTCGGCGGTAGCGCGCCGGATGGCTGCTCAGGG
GGCTTCGCTGGCACTGGCGGGGCGTACTCAGGCTTCGCTCGACGCTCTGGCAGCCGAGTGCGAAGCGGCCGGCAGTCCCC
AGACCCTGGCCATGGCCACCGACGTCACCGTCAAAGAGCAGGTGGATAATCTCTACACCAAGGTGGCCGCTACCTTCGGT
CAGCTCGACGTTGTGCTCAACGCCGCCGGCCTTGGCATCCTCAAGCCCATTCAGAACCTGAGCGAAGCAGATCTCGACCG
GCAGATGGCCGTCAACCTCAAAGGCACCTTCTTGAGTTGCCAGGCGGCGGTGCCCCTGATGAGCCAACAGTCGGGGGGGG
GCCACATTTTCAACATTCCGGGCATCCTCGGCCAGCACCCGATGGCGACGGCCGCCGCCTACTGCGCCTCCAAGTACGCC
GTCGTCGGCCTCACCAAGTCGATGGCCCTCGATCTCAAGCGCGCGGGCGTCAAATTCACGCTGCTCTACCTGGGTGGGGT
GAACACACCCTTCTGGGACAACGCCGGCATGCGCGTTCAGCGCGACAAAATGTTGAGTGCCGAGACCGCTGCCGAGGCTG
TCGCCTTTGCCCTCGCCCTCCCCTCCCCCGGTGTTCCCAACGAAATCGTCATCCAGCCCGACAGTCACCAGTTTCTCTAG

Upstream 100 bases:

>100_bases
GCACTGCCCCTGGGTTTATGCTCCTTCCCCTGGGCGGATCTGGCGGTGGACGCCGGGCAGATCCCGCACCAAGATGGGAG
GGAGTACGCGCGAGGTAGGC

Downstream 100 bases:

>100_bases
TGCCCGGAGGTTCAGCGCATGACCCACGCCAACGATCTACCCCGGCCGGTGACCATCGAGCGGGACGATTCGCCCCTCAG
CGCGCTGCAGGATCTCTTCG

Product: short chain oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MQGKVVLITGASGGIGSAVARRMAAQGASLALAGRTQASLDALAAECEAAGSPQTLAMATDVTVKEQVDNLYTKVAATFG
QLDVVLNAAGLGILKPIQNLSEADLDRQMAVNLKGTFLSCQAAVPLMSQQSGGGHIFNIPGILGQHPMATAAAYCASKYA
VVGLTKSMALDLKRAGVKFTLLYLGGVNTPFWDNAGMRVQRDKMLSAETAAEAVAFALALPSPGVPNEIVIQPDSHQFL

Sequences:

>Translated_239_residues
MQGKVVLITGASGGIGSAVARRMAAQGASLALAGRTQASLDALAAECEAAGSPQTLAMATDVTVKEQVDNLYTKVAATFG
QLDVVLNAAGLGILKPIQNLSEADLDRQMAVNLKGTFLSCQAAVPLMSQQSGGGHIFNIPGILGQHPMATAAAYCASKYA
VVGLTKSMALDLKRAGVKFTLLYLGGVNTPFWDNAGMRVQRDKMLSAETAAEAVAFALALPSPGVPNEIVIQPDSHQFL
>Mature_239_residues
MQGKVVLITGASGGIGSAVARRMAAQGASLALAGRTQASLDALAAECEAAGSPQTLAMATDVTVKEQVDNLYTKVAATFG
QLDVVLNAAGLGILKPIQNLSEADLDRQMAVNLKGTFLSCQAAVPLMSQQSGGGHIFNIPGILGQHPMATAAAYCASKYA
VVGLTKSMALDLKRAGVKFTLLYLGGVNTPFWDNAGMRVQRDKMLSAETAAEAVAFALALPSPGVPNEIVIQPDSHQFL

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=246, Percent_Identity=29.6747967479675, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI31542939, Length=194, Percent_Identity=34.020618556701, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=33.7209302325581, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI15277342, Length=232, Percent_Identity=31.8965517241379, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI40254992, Length=231, Percent_Identity=29.004329004329, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI142976729, Length=197, Percent_Identity=29.4416243654822, Blast_Score=85, Evalue=4e-17,
Organism=Homo sapiens, GI210032110, Length=200, Percent_Identity=27.5, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI19923817, Length=186, Percent_Identity=26.8817204301075, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI32483357, Length=192, Percent_Identity=29.6875, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI4503817, Length=213, Percent_Identity=26.7605633802817, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI223718074, Length=204, Percent_Identity=33.8235294117647, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI5031737, Length=234, Percent_Identity=26.0683760683761, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI7705925, Length=172, Percent_Identity=29.6511627906977, Blast_Score=77, Evalue=9e-15,
Organism=Homo sapiens, GI40254986, Length=182, Percent_Identity=31.3186813186813, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=26.984126984127, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=27.5675675675676, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI59889578, Length=177, Percent_Identity=29.9435028248588, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI40807363, Length=198, Percent_Identity=27.2727272727273, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI4758504, Length=203, Percent_Identity=31.5270935960591, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI66933014, Length=191, Percent_Identity=31.413612565445, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI126723750, Length=199, Percent_Identity=28.1407035175879, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI32455239, Length=198, Percent_Identity=29.7979797979798, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI5031765, Length=198, Percent_Identity=29.7979797979798, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4504503, Length=189, Percent_Identity=30.6878306878307, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI20149619, Length=201, Percent_Identity=27.363184079602, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI310128830, Length=205, Percent_Identity=26.3414634146341, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI310115468, Length=205, Percent_Identity=26.3414634146341, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI83715985, Length=188, Percent_Identity=32.4468085106383, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI7657478, Length=196, Percent_Identity=31.1224489795918, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI25282469, Length=227, Percent_Identity=27.3127753303965, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI4504505, Length=188, Percent_Identity=29.7872340425532, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI38348362, Length=188, Percent_Identity=28.1914893617021, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87082100, Length=193, Percent_Identity=31.6062176165803, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787820, Length=244, Percent_Identity=26.6393442622951, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1789208, Length=222, Percent_Identity=27.9279279279279, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788459, Length=199, Percent_Identity=27.1356783919598, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787526, Length=192, Percent_Identity=29.6875, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787335, Length=191, Percent_Identity=26.1780104712042, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI2367365, Length=190, Percent_Identity=32.1052631578947, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786701, Length=237, Percent_Identity=29.1139240506329, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1790717, Length=178, Percent_Identity=30.3370786516854, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789057, Length=191, Percent_Identity=28.2722513089005, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082160, Length=192, Percent_Identity=27.0833333333333, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787905, Length=189, Percent_Identity=28.042328042328, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI2367175, Length=231, Percent_Identity=25.5411255411255, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=227, Percent_Identity=29.9559471365639, Blast_Score=84, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=204, Percent_Identity=31.8627450980392, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17508895, Length=198, Percent_Identity=31.3131313131313, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=205, Percent_Identity=32.6829268292683, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=202, Percent_Identity=29.7029702970297, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=198, Percent_Identity=30.3030303030303, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17560220, Length=238, Percent_Identity=29.8319327731092, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=196, Percent_Identity=31.6326530612245, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193204405, Length=203, Percent_Identity=31.0344827586207, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=198, Percent_Identity=26.2626262626263, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71994600, Length=195, Percent_Identity=30.2564102564103, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=207, Percent_Identity=31.4009661835749, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560676, Length=197, Percent_Identity=27.9187817258883, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=210, Percent_Identity=28.0952380952381, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17564282, Length=200, Percent_Identity=25.5, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI193203115, Length=199, Percent_Identity=27.6381909547739, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193203117, Length=199, Percent_Identity=27.6381909547739, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=216, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71982365, Length=169, Percent_Identity=30.7692307692308, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17567345, Length=205, Percent_Identity=26.8292682926829, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=197, Percent_Identity=29.9492385786802, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=239, Percent_Identity=28.8702928870293, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=202, Percent_Identity=27.2277227722772, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=175, Percent_Identity=28, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=235, Percent_Identity=26.3829787234043, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=201, Percent_Identity=28.3582089552239, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=197, Percent_Identity=26.3959390862944, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=211, Percent_Identity=26.5402843601896, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI25147288, Length=194, Percent_Identity=27.319587628866, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6323882, Length=193, Percent_Identity=29.5336787564767, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6319635, Length=192, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6322861, Length=187, Percent_Identity=28.3422459893048, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24644339, Length=227, Percent_Identity=31.7180616740088, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24665243, Length=216, Percent_Identity=29.1666666666667, Blast_Score=97, Evalue=6e-21,
Organism=Drosophila melanogaster, GI221331218, Length=216, Percent_Identity=29.1666666666667, Blast_Score=97, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24665247, Length=216, Percent_Identity=28.7037037037037, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI221331216, Length=216, Percent_Identity=28.7037037037037, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI23397609, Length=197, Percent_Identity=32.994923857868, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21355319, Length=192, Percent_Identity=30.2083333333333, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24641232, Length=243, Percent_Identity=27.9835390946502, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21357041, Length=197, Percent_Identity=29.4416243654822, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24643142, Length=172, Percent_Identity=33.1395348837209, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571526, Length=197, Percent_Identity=29.9492385786802, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24639444, Length=242, Percent_Identity=30.1652892561983, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21358495, Length=201, Percent_Identity=29.3532338308458, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI116007236, Length=245, Percent_Identity=26.1224489795918, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24580925, Length=235, Percent_Identity=28.0851063829787, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI17737361, Length=203, Percent_Identity=30.0492610837438, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281364494, Length=247, Percent_Identity=26.7206477732794, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24641388, Length=243, Percent_Identity=26.7489711934156, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21357673, Length=192, Percent_Identity=28.6458333333333, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI281364892, Length=201, Percent_Identity=25.3731343283582, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24640492, Length=219, Percent_Identity=26.027397260274, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24648693, Length=249, Percent_Identity=26.9076305220884, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21355889, Length=249, Percent_Identity=26.9076305220884, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24581726, Length=225, Percent_Identity=24.8888888888889, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI28571387, Length=228, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI21356301, Length=217, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24644337, Length=199, Percent_Identity=31.6582914572864, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24671; Mature: 24671

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKVVLITGASGGIGSAVARRMAAQGASLALAGRTQASLDALAAECEAAGSPQTLAMAT
CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEE
DVTVKEQVDNLYTKVAATFGQLDVVLNAAGLGILKPIQNLSEADLDRQMAVNLKGTFLSC
CCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEE
QAAVPLMSQQSGGGHIFNIPGILGQHPMATAAAYCASKYAVVGLTKSMALDLKRAGVKFT
CCCCCHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEEHHHHHHHHHHCCEEEE
LLYLGGVNTPFWDNAGMRVQRDKMLSAETAAEAVAFALALPSPGVPNEIVIQPDSHQFL
EEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MQGKVVLITGASGGIGSAVARRMAAQGASLALAGRTQASLDALAAECEAAGSPQTLAMAT
CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEE
DVTVKEQVDNLYTKVAATFGQLDVVLNAAGLGILKPIQNLSEADLDRQMAVNLKGTFLSC
CCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEE
QAAVPLMSQQSGGGHIFNIPGILGQHPMATAAAYCASKYAVVGLTKSMALDLKRAGVKFT
CCCCCHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEEHHHHHHHHHHCCEEEE
LLYLGGVNTPFWDNAGMRVQRDKMLSAETAAEAVAFALALPSPGVPNEIVIQPDSHQFL
EEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12950922 [H]