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The map label for this gene is ctpA [H]

Identifier: 37519636

GI number: 37519636

Start: 68283

End: 69554

Strand: Reverse

Name: ctpA [H]

Synonym: gll0067

Alternate gene names: 37519636

Gene position: 69554-68283 (Counterclockwise)

Preceding gene: 37519637

Following gene: 37519635

Centisome position: 1.49

GC content: 65.02

Gene sequence:

>1272_bases
GTGGAGGCCAACTTGGACAAACCGAACGATGCAAGGCCCGTCCGGTTGCGGCGGCACGCCGTCTGGGCGGCGGCACTGGC
AAGCGCGGCGCTTGCCGGTTGCTCGGCCGAGGTGCTCTCCAGCACCGCCGGTCCCGCCCCCAAAGAGGTTCTCACCGAGA
CCTGGACTTACATCAACAATGAGTACGTCGATCCCAAGTTCAACGGCCAGGACTGGTGGAGTGTGCGCCAGACCTATCTC
GAAAAGCCCGCCGAGACCAGCGAGCAGGTCTACGAGCAAATTGCCTCGATGCTCAAGACCCTCGACGATCCGTACACCCG
TTTTTTGAATCCCAAGCAGTTCAAGAGCCTGCAGACGACCACCAGCGGTGAACTCTCCGGGGTGGGTCTGCAGATTACCC
TCGACACCGAGAGCGAACTACCCGTCGTCATTGCCGCCGTCGAAGGGTCGCCCGCCTTTCGAGGCGGTGTCAAAGCCCGC
GATTTGATCGTCGAAATCGACGGCCGACCGACCAAGGGTCAGGCCCTCGACGACGTGGCCGACCGGCTGCGCGGCAAAAT
CGGCTCCCAGGTGAATGTCGGCTTGCGCCGCGGCGAGCGCACCTTCGATGTCACCCTCACCCGCGAGACCATCCAGGTCA
ACCCGGTCACCAGCCAACTGAAGCGCCTCGACGGCCGACCCATCGGTTATATCCGCCTGTCCCAGTTCAACGGCAACGCC
GCCCAACAGGTCCGCCAGGCGATCGAGAAGCTCGAAGCCCAGGACGCGGCGGGCTACATCCTCGACCTGCGCAGCAACCC
CGGCGGTCTATTGGAAGCGGGGGTCGAAATCGCCCGTTATTGGCTGACGCCGGGTCAGACCGTCGTCTACACCGTCAACC
GCCAGGGCGAGCGCGACCAGGCCCGCGCCCAACGCGCTCCCCTCACCGCCCGGCCTCTGGTGGTGCTCATCGACGGCGGT
AGTGCCTCGGCGAGCGAAATCCTGGCCGGCGCCCTGCAGGATAACCGCCGCGCCCAACTGGTGGGCACCAAATCCTTCGG
CAAAGGGCTCATCCAGGCCATTCACCCCCTTAAGGACGGCTCGGGTCTGGCCGTTTCGATCGCCCGCTACCAGACCCCGT
CGCGGCGGGACATCCACAAACAAGGCATCGAGCCCGACGTGAAAGTGGAACTGCCCAAGAGCTTCTCGCTGGAGCAGTTG
GCCACCGACGCCGACAGCCAGTACCAGGCCGGGGCGAAGGCGCTCTCCCGCGCCCTGGCTTCTAGCCAGTAA

Upstream 100 bases:

>100_bases
CGAAGCGGTGCGCGCCTTTGCCGCCCAACGCCGCTGCAGCCTCCAGCCGGGCTAGCTGGCACCCCGGCCCCTGCGCATTA
AGATGGTTTGAGGGGTACCA

Downstream 100 bases:

>100_bases
CCACCATGCCGGTGCACCTCTATTGGGGAGAGGACGCCTACCGCCGCGGGCAGGCCGTCGAGCAACTGCGTGCCGCTGCG
GTCGAGCCGGCCTGGGAGGC

Product: carboxyl-terminal processing protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MEANLDKPNDARPVRLRRHAVWAAALASAALAGCSAEVLSSTAGPAPKEVLTETWTYINNEYVDPKFNGQDWWSVRQTYL
EKPAETSEQVYEQIASMLKTLDDPYTRFLNPKQFKSLQTTTSGELSGVGLQITLDTESELPVVIAAVEGSPAFRGGVKAR
DLIVEIDGRPTKGQALDDVADRLRGKIGSQVNVGLRRGERTFDVTLTRETIQVNPVTSQLKRLDGRPIGYIRLSQFNGNA
AQQVRQAIEKLEAQDAAGYILDLRSNPGGLLEAGVEIARYWLTPGQTVVYTVNRQGERDQARAQRAPLTARPLVVLIDGG
SASASEILAGALQDNRRAQLVGTKSFGKGLIQAIHPLKDGSGLAVSIARYQTPSRRDIHKQGIEPDVKVELPKSFSLEQL
ATDADSQYQAGAKALSRALASSQ

Sequences:

>Translated_423_residues
MEANLDKPNDARPVRLRRHAVWAAALASAALAGCSAEVLSSTAGPAPKEVLTETWTYINNEYVDPKFNGQDWWSVRQTYL
EKPAETSEQVYEQIASMLKTLDDPYTRFLNPKQFKSLQTTTSGELSGVGLQITLDTESELPVVIAAVEGSPAFRGGVKAR
DLIVEIDGRPTKGQALDDVADRLRGKIGSQVNVGLRRGERTFDVTLTRETIQVNPVTSQLKRLDGRPIGYIRLSQFNGNA
AQQVRQAIEKLEAQDAAGYILDLRSNPGGLLEAGVEIARYWLTPGQTVVYTVNRQGERDQARAQRAPLTARPLVVLIDGG
SASASEILAGALQDNRRAQLVGTKSFGKGLIQAIHPLKDGSGLAVSIARYQTPSRRDIHKQGIEPDVKVELPKSFSLEQL
ATDADSQYQAGAKALSRALASSQ
>Mature_423_residues
MEANLDKPNDARPVRLRRHAVWAAALASAALAGCSAEVLSSTAGPAPKEVLTETWTYINNEYVDPKFNGQDWWSVRQTYL
EKPAETSEQVYEQIASMLKTLDDPYTRFLNPKQFKSLQTTTSGELSGVGLQITLDTESELPVVIAAVEGSPAFRGGVKAR
DLIVEIDGRPTKGQALDDVADRLRGKIGSQVNVGLRRGERTFDVTLTRETIQVNPVTSQLKRLDGRPIGYIRLSQFNGNA
AQQVRQAIEKLEAQDAAGYILDLRSNPGGLLEAGVEIARYWLTPGQTVVYTVNRQGERDQARAQRAPLTARPLVVLIDGG
SASASEILAGALQDNRRAQLVGTKSFGKGLIQAIHPLKDGSGLAVSIARYQTPSRRDIHKQGIEPDVKVELPKSFSLEQL
ATDADSQYQAGAKALSRALASSQ

Specific function: Cleavage of the 16 C-terminal residues from the D1 precursor of photosystem II. May be involved in protection of the bacterium from thermal and osmotic stresses [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=380, Percent_Identity=29.2105263157895, Blast_Score=122, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 45969; Mature: 45969

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEANLDKPNDARPVRLRRHAVWAAALASAALAGCSAEVLSSTAGPAPKEVLTETWTYINN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCC
EYVDPKFNGQDWWSVRQTYLEKPAETSEQVYEQIASMLKTLDDPYTRFLNPKQFKSLQTT
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCC
TSGELSGVGLQITLDTESELPVVIAAVEGSPAFRGGVKARDLIVEIDGRPTKGQALDDVA
CCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
DRLRGKIGSQVNVGLRRGERTFDVTLTRETIQVNPVTSQLKRLDGRPIGYIRLSQFNGNA
HHHHHHCCCCEEEHHHCCCEEEEEEEEECEEEECHHHHHHHHCCCCCEEEEEEEECCCHH
AQQVRQAIEKLEAQDAAGYILDLRSNPGGLLEAGVEIARYWLTPGQTVVYTVNRQGERDQ
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
ARAQRAPLTARPLVVLIDGGSASASEILAGALQDNRRAQLVGTKSFGKGLIQAIHPLKDG
HHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCC
SGLAVSIARYQTPSRRDIHKQGIEPDVKVELPKSFSLEQLATDADSQYQAGAKALSRALA
CCCEEEEEECCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
SSQ
CCC
>Mature Secondary Structure
MEANLDKPNDARPVRLRRHAVWAAALASAALAGCSAEVLSSTAGPAPKEVLTETWTYINN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHCC
EYVDPKFNGQDWWSVRQTYLEKPAETSEQVYEQIASMLKTLDDPYTRFLNPKQFKSLQTT
CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCC
TSGELSGVGLQITLDTESELPVVIAAVEGSPAFRGGVKARDLIVEIDGRPTKGQALDDVA
CCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH
DRLRGKIGSQVNVGLRRGERTFDVTLTRETIQVNPVTSQLKRLDGRPIGYIRLSQFNGNA
HHHHHHCCCCEEEHHHCCCEEEEEEEEECEEEECHHHHHHHHCCCCCEEEEEEEECCCHH
AQQVRQAIEKLEAQDAAGYILDLRSNPGGLLEAGVEIARYWLTPGQTVVYTVNRQGERDQ
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
ARAQRAPLTARPLVVLIDGGSASASEILAGALQDNRRAQLVGTKSFGKGLIQAIHPLKDG
HHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCC
SGLAVSIARYQTPSRRDIHKQGIEPDVKVELPKSFSLEQLATDADSQYQAGAKALSRALA
CCCEEEEEECCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHH
SSQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8034700; 8058761; 8590279; 8905231 [H]