| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is natB [H]
Identifier: 37519620
GI number: 37519620
Start: 51413
End: 52609
Strand: Reverse
Name: natB [H]
Synonym: gll0051
Alternate gene names: 37519620
Gene position: 52609-51413 (Counterclockwise)
Preceding gene: 37519621
Following gene: 37519618
Centisome position: 1.13
GC content: 63.66
Gene sequence:
>1197_bases ATGAAACCATCTGCCCGCCGGCAAGATGCGCTCGATCGCATCGGTGTCGTTTTCTGCAAAGAGGTGATCGACAACCTGCG CGACCGGCGCACGCTGCTCACGGCACTGCTCACTCCCCTGACCGGCCCGCTGATCCTGGCGGCAACGGTGATCTTGGCTG GACAGGTGATTTCCCAGGAGGCGGAGAAGCCCGTTACCCTACCGGTGGCCGGAACCCAAAATGCACCGCAGCTGGTGGCG TTTCTAGAAAGCCAGCCGGGGGTCGAAGTGCGGCCCCTGGTCGCCGTAGACGAAGCGCAGGTGCGCAGTGGTCAGTACGA CTTTGCCCTGGTGATCCCACCCGAATTCGGCCGCGAGTGGCGTGCCGGCCGACCGGCCGCGGTGCGTCTGATCGTCGATA CGGGGCGCCGGCAGACCAGCGGCGCCCTGGCACGGGTGCGCGCGCTCCTAGCCGCCTACAGCCGCCAGATTGCTTCGCTG CGGCTTTTGGCCCGGGGGATCAACCCGGCCATCCAGCAGGCGGTGGCAGTCGAGAGCGTCGATGTGGCCTCCTCCGAGGG ACGGGCGGCTTTTATCCTCGGACTGATGCCTTTTTACCTGATGTTCGCGGCCTTTATCGGCGGCTTCTACGTGGCTATCG ACACCACCACCGGCGAGCGCGAACGCGGTTCGCTTGAACCACTGGTGATCAACCCCGTCGCCCGCTGGGAGCTGATTGTC GGCAAACTGGCGGCCACGCTGCTGTTTGCGCTGGTGGTGGTGGCCGAAACGCTCGTCGGACTGGCGGCGGTGCTCGCGGT TGTCCCCCTCGAGCAGTTCGGATTGCGCTACAGCTTCAACCCGTCGATGTTTGTGGGTCTATTTTTGCTCTGCCTGCCGG TGGTGCTGTTGGCGGGAGCGGTCCTCACGATCCTCGCCTCCTACGCCCGCAGCTTCAAAGAGGCCCAGAATTATCTGACG CCGATCATTTTGGTACCGACGTTCCCCAGTTTGCTGGTGGCCCTGCTGCCGCTCAAAGCGGAAGGATGGGCGGCATTTGT GCCCATCTACAGCCAGTTGCTGTTGATGAGCCAGATTATCAAAGGCGAGGCGGTGAACGGGGGGTTCGCCGCCGTCTCTT CGCTGTTTACCCTGGTAGTGGGTGGGGTGCTTGTCTGGCTTGCCACGCGCATCTTCGACCGCGAGTCGGTGGTTTGA
Upstream 100 bases:
>100_bases CCGCGGAGGGCACCGCGGAGCAACTGCTCGCCGCCACCGGCAAAGCGAGCCTCGAAGACGCCTTCGTGGCTGTGATCGGC AGCGAAGAAGGCTTGTTGTT
Downstream 100 bases:
>100_bases AAAGTGTCGGGTGTCGGAGCGCGCTCTGACACCCGACACCTGAATTTACCGGTAGCTGGGAGGGCGCAGATTGACCAGTT CCTCGGGCGAAGCGAGCATG
Product: Na+ ABC transporter permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKPSARRQDALDRIGVVFCKEVIDNLRDRRTLLTALLTPLTGPLILAATVILAGQVISQEAEKPVTLPVAGTQNAPQLVA FLESQPGVEVRPLVAVDEAQVRSGQYDFALVIPPEFGREWRAGRPAAVRLIVDTGRRQTSGALARVRALLAAYSRQIASL RLLARGINPAIQQAVAVESVDVASSEGRAAFILGLMPFYLMFAAFIGGFYVAIDTTTGERERGSLEPLVINPVARWELIV GKLAATLLFALVVVAETLVGLAAVLAVVPLEQFGLRYSFNPSMFVGLFLLCLPVVLLAGAVLTILASYARSFKEAQNYLT PIILVPTFPSLLVALLPLKAEGWAAFVPIYSQLLLMSQIIKGEAVNGGFAAVSSLFTLVVGGVLVWLATRIFDRESVV
Sequences:
>Translated_398_residues MKPSARRQDALDRIGVVFCKEVIDNLRDRRTLLTALLTPLTGPLILAATVILAGQVISQEAEKPVTLPVAGTQNAPQLVA FLESQPGVEVRPLVAVDEAQVRSGQYDFALVIPPEFGREWRAGRPAAVRLIVDTGRRQTSGALARVRALLAAYSRQIASL RLLARGINPAIQQAVAVESVDVASSEGRAAFILGLMPFYLMFAAFIGGFYVAIDTTTGERERGSLEPLVINPVARWELIV GKLAATLLFALVVVAETLVGLAAVLAVVPLEQFGLRYSFNPSMFVGLFLLCLPVVLLAGAVLTILASYARSFKEAQNYLT PIILVPTFPSLLVALLPLKAEGWAAFVPIYSQLLLMSQIIKGEAVNGGFAAVSSLFTLVVGGVLVWLATRIFDRESVV >Mature_398_residues MKPSARRQDALDRIGVVFCKEVIDNLRDRRTLLTALLTPLTGPLILAATVILAGQVISQEAEKPVTLPVAGTQNAPQLVA FLESQPGVEVRPLVAVDEAQVRSGQYDFALVIPPEFGREWRAGRPAAVRLIVDTGRRQTSGALARVRALLAAYSRQIASL RLLARGINPAIQQAVAVESVDVASSEGRAAFILGLMPFYLMFAAFIGGFYVAIDTTTGERERGSLEPLVINPVARWELIV GKLAATLLFALVVVAETLVGLAAVLAVVPLEQFGLRYSFNPSMFVGLFLLCLPVVLLAGAVLTILASYARSFKEAQNYLT PIILVPTFPSLLVALLPLKAEGWAAFVPIYSQLLLMSQIIKGEAVNGGFAAVSSLFTLVVGGVLVWLATRIFDRESVV
Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]
COG id: COG1668
COG function: function code CP; ABC-type Na+ efflux pump, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42744; Mature: 42744
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSARRQDALDRIGVVFCKEVIDNLRDRRTLLTALLTPLTGPLILAATVILAGQVISQE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AEKPVTLPVAGTQNAPQLVAFLESQPGVEVRPLVAVDEAQVRSGQYDFALVIPPEFGREW CCCCEEEEECCCCCCHHHHHHHHCCCCCCEECEEEECHHHHCCCCCCEEEEECCCCCCCC RAGRPAAVRLIVDTGRRQTSGALARVRALLAAYSRQIASLRLLARGINPAIQQAVAVESV CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DVASSEGRAAFILGLMPFYLMFAAFIGGFYVAIDTTTGERERGSLEPLVINPVARWELIV HCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEECCHHHHHHHH GKLAATLLFALVVVAETLVGLAAVLAVVPLEQFGLRYSFNPSMFVGLFLLCLPVVLLAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHH VLTILASYARSFKEAQNYLTPIILVPTFPSLLVALLPLKAEGWAAFVPIYSQLLLMSQII HHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH KGEAVNGGFAAVSSLFTLVVGGVLVWLATRIFDRESVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKPSARRQDALDRIGVVFCKEVIDNLRDRRTLLTALLTPLTGPLILAATVILAGQVISQE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AEKPVTLPVAGTQNAPQLVAFLESQPGVEVRPLVAVDEAQVRSGQYDFALVIPPEFGREW CCCCEEEEECCCCCCHHHHHHHHCCCCCCEECEEEECHHHHCCCCCCEEEEECCCCCCCC RAGRPAAVRLIVDTGRRQTSGALARVRALLAAYSRQIASLRLLARGINPAIQQAVAVESV CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DVASSEGRAAFILGLMPFYLMFAAFIGGFYVAIDTTTGERERGSLEPLVINPVARWELIV HCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEECCHHHHHHHH GKLAATLLFALVVVAETLVGLAAVLAVVPLEQFGLRYSFNPSMFVGLFLLCLPVVLLAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHHHHH VLTILASYARSFKEAQNYLTPIILVPTFPSLLVALLPLKAEGWAAFVPIYSQLLLMSQII HHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH KGEAVNGGFAAVSSLFTLVVGGVLVWLATRIFDRESVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9106203; 9384377 [H]