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The map label for this gene is gatC

Identifier: 34499811

GI number: 34499811

Start: 4697160

End: 4697447

Strand: Reverse

Name: gatC

Synonym: CV_4356

Alternate gene names: 34499811

Gene position: 4697447-4697160 (Counterclockwise)

Preceding gene: 161594047

Following gene: 34499810

Centisome position: 98.87

GC content: 62.15

Gene sequence:

>288_bases
ATGTCGCTGACGCATCAGGATGTCGCACGGATCGCCAAGCTTGCCCGCATCAACGTGAGCGAGGCGGAAATCGCCGCCAC
GGCGGACCAGCTCAACAATATTTTCGGCCTGATCGAAAAGATGCAGGCCGTCGACACCGCCGGCATCGAGCCGATGGCGC
ATCCGCAGGATGTTTCCCTGCGCCTGCGCGACGACGTCGTCACCGAACCCAACCGGCGCGAGGCCTTCCAGGCGGTCGCG
CCGCAAGTGGAAAAAGGCCTGTTCCTCGTTCCCAAAGTGATCGAGTAA

Upstream 100 bases:

>100_bases
CCCCCGGAATGCGTCGCGGCGCAATGTCGATCTTGGGAGAATCAAACGGGGTATGATACCCTATAAAGCTTGAAATATTA
AAGGTTTTAACGAGGAAACC

Downstream 100 bases:

>100_bases
GCCTGTGAGCCGTCCCGCCGCGATTGGTTCCCAGAAAATCGCCGGCCGGGCCAGACTATCCGGATAGCAAGATTTGATCG
AAATGACACAAGCCACCCTC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSLTHQDVARIAKLARINVSEAEIAATADQLNNIFGLIEKMQAVDTAGIEPMAHPQDVSLRLRDDVVTEPNRREAFQAVA
PQVEKGLFLVPKVIE

Sequences:

>Translated_95_residues
MSLTHQDVARIAKLARINVSEAEIAATADQLNNIFGLIEKMQAVDTAGIEPMAHPQDVSLRLRDDVVTEPNRREAFQAVA
PQVEKGLFLVPKVIE
>Mature_94_residues
SLTHQDVARIAKLARINVSEAEIAATADQLNNIFGLIEKMQAVDTAGIEPMAHPQDVSLRLRDDVVTEPNRREAFQAVAP
QVEKGLFLVPKVIE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_CHRVO (Q7NPY6)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_904026.1
- ProteinModelPortal:   Q7NPY6
- SMR:   Q7NPY6
- GeneID:   2549716
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_4356
- NMPDR:   fig|243365.1.peg.4356
- HOGENOM:   HBG586403
- OMA:   SVTPMAM
- ProtClustDB:   PRK00034
- BioCyc:   CVIO243365:CV_4356-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10461; Mature: 10330

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTHQDVARIAKLARINVSEAEIAATADQLNNIFGLIEKMQAVDTAGIEPMAHPQDVSL
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
RLRDDVVTEPNRREAFQAVAPQVEKGLFLVPKVIE
EECCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCC
>Mature Secondary Structure 
SLTHQDVARIAKLARINVSEAEIAATADQLNNIFGLIEKMQAVDTAGIEPMAHPQDVSL
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
RLRDDVVTEPNRREAFQAVAPQVEKGLFLVPKVIE
EECCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782