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The map label for this gene is cdh [H]

Identifier: 34499770

GI number: 34499770

Start: 4655678

End: 4656439

Strand: Reverse

Name: cdh [H]

Synonym: CV_4315

Alternate gene names: 34499770

Gene position: 4656439-4655678 (Counterclockwise)

Preceding gene: 34499771

Following gene: 34499769

Centisome position: 98.01

GC content: 69.69

Gene sequence:

>762_bases
ATGAGAAGAAGAATCTTGGCGGGCGTCAGCCTGTGCGGCCTGCTGCTTGCGGGCGCGTCGTTCTACGCGCTGGCGGATGG
CGACGCCTTGTGGCGCATCGTTGGCGGGCAGTGCGTGCCGGCCCAGCAGGCGCAGGGCCAGCCCGGCCCCTGCGCCGAAG
TGGCGCTGCAGCGGGGCGTGGCGGTGCTGAAGGACAGGAACGGCCCGTTGCAGTACCTGCTGATTCCCACCGACAAGGTC
AGCGGCATCGAGAGCCCGCGGCTGCTGGGAGACGGCGTGCCCGCTTATTGGCGCGCGGCCTGGCAGGCGCGGCGCTATCT
GGACGCGCGGCGCGGCCAGCCGCTGCCAAGGCTGGCGTTGTCGCTGGCCATCAATTCCGAGTACGGCCGCAGCCAGAACC
AGCTGCACATCCACATCTCCTGCACCGACCCGACCGTGCGCCAGCAGGTCGACGATCTGGCCGACGGCCTGAAGCGCCGT
TGGCGGCAACTGCCGGTGGAGCTGAAAGGGCACGCGTACTGGGCAAGGCGCGTCGACGCCGACCAGAACGGCGACCCCCT
GGACGACCCCTTCCGCTTGCTGGCCAATGAATTGCCGGGCGCGCGCGCCGAGATGGGACGCTACGGCATGGCGATGCTGC
CGGCGCGCTTCGCCGACGGCGAGGGCTTCGTGCTGCTGGCCACCCGGTCCGATCTCCTCGAAATCAACCGCGGCTCGGCC
GAGGAGCTGCAGGACCACGATTGCCGGATTCTGAAGCCGTGA

Upstream 100 bases:

>100_bases
ATGGCGCGTTTCGCCTGGCTGGGCGTGTTGTTCTGAGTTGGCGGAACCTGCGGATGCGGTCCCCGGGCCGCGTCGGATCA
TTCCAAATCATGGAGTCTCA

Downstream 100 bases:

>100_bases
CAGGGGGCGCGTCCGGCCGGGCGACTCGCGGTATCATCGCATCCTGGCCGAGGTGCGGCGCAGGCTGGCGGATGTTCTGC
CGGCGGCGGCGTTCGGCCGC

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRRRILAGVSLCGLLLAGASFYALADGDALWRIVGGQCVPAQQAQGQPGPCAEVALQRGVAVLKDRNGPLQYLLIPTDKV
SGIESPRLLGDGVPAYWRAAWQARRYLDARRGQPLPRLALSLAINSEYGRSQNQLHIHISCTDPTVRQQVDDLADGLKRR
WRQLPVELKGHAYWARRVDADQNGDPLDDPFRLLANELPGARAEMGRYGMAMLPARFADGEGFVLLATRSDLLEINRGSA
EELQDHDCRILKP

Sequences:

>Translated_253_residues
MRRRILAGVSLCGLLLAGASFYALADGDALWRIVGGQCVPAQQAQGQPGPCAEVALQRGVAVLKDRNGPLQYLLIPTDKV
SGIESPRLLGDGVPAYWRAAWQARRYLDARRGQPLPRLALSLAINSEYGRSQNQLHIHISCTDPTVRQQVDDLADGLKRR
WRQLPVELKGHAYWARRVDADQNGDPLDDPFRLLANELPGARAEMGRYGMAMLPARFADGEGFVLLATRSDLLEINRGSA
EELQDHDCRILKP
>Mature_253_residues
MRRRILAGVSLCGLLLAGASFYALADGDALWRIVGGQCVPAQQAQGQPGPCAEVALQRGVAVLKDRNGPLQYLLIPTDKV
SGIESPRLLGDGVPAYWRAAWQARRYLDARRGQPLPRLALSLAINSEYGRSQNQLHIHISCTDPTVRQQVDDLADGLKRR
WRQLPVELKGHAYWARRVDADQNGDPLDDPFRLLANELPGARAEMGRYGMAMLPARFADGEGFVLLATRSDLLEINRGSA
EELQDHDCRILKP

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family [H]

Homologues:

Organism=Escherichia coli, GI1790352, Length=244, Percent_Identity=48.3606557377049, Blast_Score=226, Evalue=8e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003763
- InterPro:   IPR015993 [H]

Pfam domain/function: PF02611 CDH [H]

EC number: =3.6.1.26 [H]

Molecular weight: Translated: 27938; Mature: 27938

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRILAGVSLCGLLLAGASFYALADGDALWRIVGGQCVPAQQAQGQPGPCAEVALQRGV
CCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCHHHCCCCCCCHHHHHHHCCH
AVLKDRNGPLQYLLIPTDKVSGIESPRLLGDGVPAYWRAAWQARRYLDARRGQPLPRLAL
HEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
SLAINSEYGRSQNQLHIHISCTDPTVRQQVDDLADGLKRRWRQLPVELKGHAYWARRVDA
EEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCC
DQNGDPLDDPFRLLANELPGARAEMGRYGMAMLPARFADGEGFVLLATRSDLLEINRGSA
CCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHCCCEECCCCCEEEEEECCCHHCCCCCCH
EELQDHDCRILKP
HHHCCCCCEEECC
>Mature Secondary Structure
MRRRILAGVSLCGLLLAGASFYALADGDALWRIVGGQCVPAQQAQGQPGPCAEVALQRGV
CCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCHHHCCCCCCCHHHHHHHCCH
AVLKDRNGPLQYLLIPTDKVSGIESPRLLGDGVPAYWRAAWQARRYLDARRGQPLPRLAL
HEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH
SLAINSEYGRSQNQLHIHISCTDPTVRQQVDDLADGLKRRWRQLPVELKGHAYWARRVDA
EEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCC
DQNGDPLDDPFRLLANELPGARAEMGRYGMAMLPARFADGEGFVLLATRSDLLEINRGSA
CCCCCCCCHHHHHHHHHCCCCHHHHCCCCHHHCCCEECCCCCEEEEEECCCHHCCCCCCH
EELQDHDCRILKP
HHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA