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The map label for this gene is phoD [H]

Identifier: 34499737

GI number: 34499737

Start: 4618245

End: 4620350

Strand: Direct

Name: phoD [H]

Synonym: CV_4282

Alternate gene names: 34499737

Gene position: 4618245-4620350 (Clockwise)

Preceding gene: 34499734

Following gene: 34499738

Centisome position: 97.2

GC content: 67.05

Gene sequence:

>2106_bases
TTGAGCCGCGATAATCCGCAACCTTGTGCATTCCTACAACAAACGACAGTCTCTGGAGAAACGATGGATAGACGGCAATT
CCTCAAGTGGGGCAGTTTCCTGACGGTATCGGTGGCGGCGGTGGGCTGCGGCGGCGGAGGCGGCGACAGCGCCGGCGCGG
CAGGGCAGCGCCTGCAGGCGGCGGGACAGGGCTTCGGCCTGGGCGTGGCCTCGGGCGATCCGCGCCCGGACAGCATCATC
CTGTGGACACGCGTCGACGGCGGCGACGGCGCCAATCCGCTGTCGGTCACCGTGCAGCTGTCGGACAAGGCGGACTTCTC
CAGCCTGCTAGTCAACCAGGCGCTCAGCGCCGATCCGGGCTGGGACTACACCGTGCGCCACAAGGTGACCGGCCTGTCCA
GCGCCACCACTTATTACTACCGCTTCCTGACCGGCAAGACCGTCAGCGCCGCAGGCCGCACCAAAACCGCGCCGGCCGCC
GGCACGCCGCTGTCCCAACTCAAGTTCGCCTACATCACCTGCCAGGACTGGAGCGTCAACCACTGGGGCGCCTTCGACGA
GATCGCCAAGCTGGACCTGGACTTCGTGATGCACGTCGGCGATTACATCTACGAAACCGTCGGCGCCGGCTTCCAGACCG
GCAACAACGAAACCCGGCACCCGCCGCTGACGCTGCCCAACGGCACCAAGCGCGCCGACGGCGCCATCTACGCCACCACG
CTGGCCGACTACCGCTACCTGTACAAGAGCTACCGCGCCGACCCGCGCATCCAGGCGGTGCACGCCAACTTCCCGGTGAT
CTCGATCTGGGACGACCACGAGTTCTCCGACGACTGCTGGCAGGACCGTCAGGTGTACTACCCCGGCGACGACAGCGCGC
CCAGCACGCCGCGCCGCCGCAGCGCCAACCAGGCCTGGTTCGAATACACGCCGGCCGATGTCAGCATCGATCTGGCGAAC
CCCTCGTTCCAGAACATCCAGATCTACCGCAGCTTCGCCTTCGGCAACCTGGCCACGCTGGTGATGACCGACCAGCGCCT
GTACCGCTCCGACCACATCATCCCGGAAACCGCCGCGCCGAACACCGGCCTGGCCAACCTGGGCAGCCGCTACTTCGTGC
CCAAAACCACGCTGGCCCAGGCCGAGGCCGCCAAGATGGCGTCCACCGGCGGCAATCTGCTCAACGTGTCCATCCTCGGC
GCCGTCCAGCGCGCCTGGTGGCAGCAGCAGATGCAAAGCGCCGCCACCACCTGGAAGCTGTGGGGCAACGAGGTGTCCCT
GCTCAGGATGGGCGTGGACGGCACCATGGCGGTGGCCAGCCTGCTGGAGCAGGGCTTGTCGTCCGCGCTGGCGCAGGGCT
TCGGCCTCAACCTCGGCGCCGCCCAGCAGCAACAGCTGACCGGCGCGCTGTACCAGGACCTGCTGGCCGCCGACACCAGT
GGCGCGACCCCGGTGCTGAGCTATGCCAACACCCAGCCGCTGCTGGCCGGCTTCAGCGGCGGCGCGATCAGCGCCGGCGT
GTTCGCCGCCGCGGTGAAGCCTTCGCTTGACGGCAACCTGCCGCCGAGCATGCTGCTCGCCCAGTACATCCTCAACGCCG
ACCAGTGGGACGGCTACAACGCCGAGCGCAAGACGCTGATGGCCTTCCTGAAAAGCAACAACATCGGCAACGTGGTGGGC
ATCACCGGCGACATCCACGCCTTCTTCGCCGGCCCCGTGATGGACGACTTCGACGCCGCCAGCCCGACGCCGGTGATGGT
GGATCTGGTGACCGCCGGCATCTCCAGCAACTCCTTCTTCAGCTATTTCAAGAACGTGGTGGACACCGTGCCGGCCTTCG
CCAAGGCCGCGCCGCTGATCTACCAGACGGTGAACGGCCAGACGGTCAACACCTTCAACAGCACGCTGAAAACCTTCAAC
CCGTGGCTGAAGTACGCCGACACTGACGCCCAAGGCTACGCGGTGGTGACGCTGACGCCGGGCAAGCTCAGCTGCACCTT
CCACAAGATGGCCAAGCTGGCGAACGGCGTCGCGCCGTCGCCGGCCACCGCCAGCACCCAGACGGTGGAAGTGCTGGCCG
GCGCGCCGGCCGTCAACGTGCTGTAG

Upstream 100 bases:

>100_bases
CATCAAGATCTGAGTCGAGAAATCGTTGTTGGTTTTACGCGACGCTCACTTAGAGCAAGCGCTCGATTCAATTGACCGCC
CCATTCATGCAACTTAAATA

Downstream 100 bases:

>100_bases
CGCGGCTAACCAACGCCCTGATGCCGCGTGGCGCCGACCTGCCGTACCGCTTGCACTGTCGGCGTCGGCGCGCCTTGCCT
CAGCCCTAAAACTGCGTGTT

Product: phosphodiesterase I

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 701; Mature: 700

Protein sequence:

>701_residues
MSRDNPQPCAFLQQTTVSGETMDRRQFLKWGSFLTVSVAAVGCGGGGGDSAGAAGQRLQAAGQGFGLGVASGDPRPDSII
LWTRVDGGDGANPLSVTVQLSDKADFSSLLVNQALSADPGWDYTVRHKVTGLSSATTYYYRFLTGKTVSAAGRTKTAPAA
GTPLSQLKFAYITCQDWSVNHWGAFDEIAKLDLDFVMHVGDYIYETVGAGFQTGNNETRHPPLTLPNGTKRADGAIYATT
LADYRYLYKSYRADPRIQAVHANFPVISIWDDHEFSDDCWQDRQVYYPGDDSAPSTPRRRSANQAWFEYTPADVSIDLAN
PSFQNIQIYRSFAFGNLATLVMTDQRLYRSDHIIPETAAPNTGLANLGSRYFVPKTTLAQAEAAKMASTGGNLLNVSILG
AVQRAWWQQQMQSAATTWKLWGNEVSLLRMGVDGTMAVASLLEQGLSSALAQGFGLNLGAAQQQQLTGALYQDLLAADTS
GATPVLSYANTQPLLAGFSGGAISAGVFAAAVKPSLDGNLPPSMLLAQYILNADQWDGYNAERKTLMAFLKSNNIGNVVG
ITGDIHAFFAGPVMDDFDAASPTPVMVDLVTAGISSNSFFSYFKNVVDTVPAFAKAAPLIYQTVNGQTVNTFNSTLKTFN
PWLKYADTDAQGYAVVTLTPGKLSCTFHKMAKLANGVAPSPATASTQTVEVLAGAPAVNVL

Sequences:

>Translated_701_residues
MSRDNPQPCAFLQQTTVSGETMDRRQFLKWGSFLTVSVAAVGCGGGGGDSAGAAGQRLQAAGQGFGLGVASGDPRPDSII
LWTRVDGGDGANPLSVTVQLSDKADFSSLLVNQALSADPGWDYTVRHKVTGLSSATTYYYRFLTGKTVSAAGRTKTAPAA
GTPLSQLKFAYITCQDWSVNHWGAFDEIAKLDLDFVMHVGDYIYETVGAGFQTGNNETRHPPLTLPNGTKRADGAIYATT
LADYRYLYKSYRADPRIQAVHANFPVISIWDDHEFSDDCWQDRQVYYPGDDSAPSTPRRRSANQAWFEYTPADVSIDLAN
PSFQNIQIYRSFAFGNLATLVMTDQRLYRSDHIIPETAAPNTGLANLGSRYFVPKTTLAQAEAAKMASTGGNLLNVSILG
AVQRAWWQQQMQSAATTWKLWGNEVSLLRMGVDGTMAVASLLEQGLSSALAQGFGLNLGAAQQQQLTGALYQDLLAADTS
GATPVLSYANTQPLLAGFSGGAISAGVFAAAVKPSLDGNLPPSMLLAQYILNADQWDGYNAERKTLMAFLKSNNIGNVVG
ITGDIHAFFAGPVMDDFDAASPTPVMVDLVTAGISSNSFFSYFKNVVDTVPAFAKAAPLIYQTVNGQTVNTFNSTLKTFN
PWLKYADTDAQGYAVVTLTPGKLSCTFHKMAKLANGVAPSPATASTQTVEVLAGAPAVNVL
>Mature_700_residues
SRDNPQPCAFLQQTTVSGETMDRRQFLKWGSFLTVSVAAVGCGGGGGDSAGAAGQRLQAAGQGFGLGVASGDPRPDSIIL
WTRVDGGDGANPLSVTVQLSDKADFSSLLVNQALSADPGWDYTVRHKVTGLSSATTYYYRFLTGKTVSAAGRTKTAPAAG
TPLSQLKFAYITCQDWSVNHWGAFDEIAKLDLDFVMHVGDYIYETVGAGFQTGNNETRHPPLTLPNGTKRADGAIYATTL
ADYRYLYKSYRADPRIQAVHANFPVISIWDDHEFSDDCWQDRQVYYPGDDSAPSTPRRRSANQAWFEYTPADVSIDLANP
SFQNIQIYRSFAFGNLATLVMTDQRLYRSDHIIPETAAPNTGLANLGSRYFVPKTTLAQAEAAKMASTGGNLLNVSILGA
VQRAWWQQQMQSAATTWKLWGNEVSLLRMGVDGTMAVASLLEQGLSSALAQGFGLNLGAAQQQQLTGALYQDLLAADTSG
ATPVLSYANTQPLLAGFSGGAISAGVFAAAVKPSLDGNLPPSMLLAQYILNADQWDGYNAERKTLMAFLKSNNIGNVVGI
TGDIHAFFAGPVMDDFDAASPTPVMVDLVTAGISSNSFFSYFKNVVDTVPAFAKAAPLIYQTVNGQTVNTFNSTLKTFNP
WLKYADTDAQGYAVVTLTPGKLSCTFHKMAKLANGVAPSPATASTQTVEVLAGAPAVNVL

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 74897; Mature: 74765

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDNPQPCAFLQQTTVSGETMDRRQFLKWGSFLTVSVAAVGCGGGGGDSAGAAGQRLQA
CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCHHHHHHHH
AGQGFGLGVASGDPRPDSIILWTRVDGGDGANPLSVTVQLSDKADFSSLLVNQALSADPG
CCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCC
WDYTVRHKVTGLSSATTYYYRFLTGKTVSAAGRTKTAPAAGTPLSQLKFAYITCQDWSVN
CCEEEEEEECCCCHHHEEEEEEECCCEEECCCCCCCCCCCCCCHHHEEEEEEEEECCCCC
HWGAFDEIAKLDLDFVMHVGDYIYETVGAGFQTGNNETRHPPLTLPNGTKRADGAIYATT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEHH
LADYRYLYKSYRADPRIQAVHANFPVISIWDDHEFSDDCWQDRQVYYPGDDSAPSTPRRR
HHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCHHHCCCEEEECCCCCCCCCCCCC
SANQAWFEYTPADVSIDLANPSFQNIQIYRSFAFGNLATLVMTDQRLYRSDHIIPETAAP
CCCCCEEEECCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEECHHHHHCCCCCCCCCCC
NTGLANLGSRYFVPKTTLAQAEAAKMASTGGNLLNVSILGAVQRAWWQQQMQSAATTWKL
CCCHHHCCCEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEE
WGNEVSLLRMGVDGTMAVASLLEQGLSSALAQGFGLNLGAAQQQQLTGALYQDLLAADTS
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
GATPVLSYANTQPLLAGFSGGAISAGVFAAAVKPSLDGNLPPSMLLAQYILNADQWDGYN
CCCCEEECCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
AERKTLMAFLKSNNIGNVVGITGDIHAFFAGPVMDDFDAASPTPVMVDLVTAGISSNSFF
HHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEHHCCCCCHHH
SYFKNVVDTVPAFAKAAPLIYQTVNGQTVNTFNSTLKTFNPWLKYADTDAQGYAVVTLTP
HHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHCHHHHCCCCCCCCEEEEEECC
GKLSCTFHKMAKLANGVAPSPATASTQTVEVLAGAPAVNVL
CCEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
SRDNPQPCAFLQQTTVSGETMDRRQFLKWGSFLTVSVAAVGCGGGGGDSAGAAGQRLQA
CCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCHHHHHHHH
AGQGFGLGVASGDPRPDSIILWTRVDGGDGANPLSVTVQLSDKADFSSLLVNQALSADPG
CCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCC
WDYTVRHKVTGLSSATTYYYRFLTGKTVSAAGRTKTAPAAGTPLSQLKFAYITCQDWSVN
CCEEEEEEECCCCHHHEEEEEEECCCEEECCCCCCCCCCCCCCHHHEEEEEEEEECCCCC
HWGAFDEIAKLDLDFVMHVGDYIYETVGAGFQTGNNETRHPPLTLPNGTKRADGAIYATT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEHH
LADYRYLYKSYRADPRIQAVHANFPVISIWDDHEFSDDCWQDRQVYYPGDDSAPSTPRRR
HHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCHHHCCCEEEECCCCCCCCCCCCC
SANQAWFEYTPADVSIDLANPSFQNIQIYRSFAFGNLATLVMTDQRLYRSDHIIPETAAP
CCCCCEEEECCCCEEEEECCCCCCCEEEEEEECCCCEEEEEEECHHHHHCCCCCCCCCCC
NTGLANLGSRYFVPKTTLAQAEAAKMASTGGNLLNVSILGAVQRAWWQQQMQSAATTWKL
CCCHHHCCCEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHEEEE
WGNEVSLLRMGVDGTMAVASLLEQGLSSALAQGFGLNLGAAQQQQLTGALYQDLLAADTS
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
GATPVLSYANTQPLLAGFSGGAISAGVFAAAVKPSLDGNLPPSMLLAQYILNADQWDGYN
CCCCEEECCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
AERKTLMAFLKSNNIGNVVGITGDIHAFFAGPVMDDFDAASPTPVMVDLVTAGISSNSFF
HHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEHHCCCCCHHH
SYFKNVVDTVPAFAKAAPLIYQTVNGQTVNTFNSTLKTFNPWLKYADTDAQGYAVVTLTP
HHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHCHHHHCCCCCCCCEEEEEECC
GKLSCTFHKMAKLANGVAPSPATASTQTVEVLAGAPAVNVL
CCEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]