| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499727
Identifier: 34499727
GI number: 34499727
Start: 4607226
End: 4607603
Strand: Direct
Name: 34499727
Synonym: CV_4272
Alternate gene names: NA
Gene position: 4607226-4607603 (Clockwise)
Preceding gene: 34499726
Following gene: 34499734
Centisome position: 96.97
GC content: 67.46
Gene sequence:
>378_bases ATGAAAGTCAGCAGCCATTTCCTGTTCACCGGCGCCTTCGTCCTCACCCTGCTCAGCCTCGCCGACCAGCAATACCTGAT GCTGCCGGTGGCCTTCCTGGCCATCTTCCTCGGCCTGTCGGCAGCCGACCGCGAGCAGCTGGCCGAGATGTCGCCGCGCG CCGCCGCGATGCTGCTGCCGGCCTCGCAGCGGCCGCTGATGCCGCTGGATGCCTTCCGCGGACAAGACCTGATGTTTTAT CGCGCCGGCAGTCCGGTTTACCGCACCTTGCACGCGCGCGACGCCCGCTGGCAGTTCCTGGGCGAACAGGGGGAGGTGGC CGAGGAGCCGGGCTGCATACGAGTCTATCCCGGCTATCTGTACCGCCGGCAGCCCTGA
Upstream 100 bases:
>100_bases CTATGGCGCGCCTCCCTCGACCCAATCTATCCCGCCGCCGCGACACGCCGCCTGCGCAGATCCCGGGAGCCGCCAACGTC CGCATCAATGGATAGAAACC
Downstream 100 bases:
>100_bases GGGAGCGCCTCAGACTCGGACCGGCCGGCCGCCGGCCTCGGTCTCGCGGATTTCGCGCGCCAGGAAATAGTTGAGCGCGG TGCGCAGCACGGCGATGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MKVSSHFLFTGAFVLTLLSLADQQYLMLPVAFLAIFLGLSAADREQLAEMSPRAAAMLLPASQRPLMPLDAFRGQDLMFY RAGSPVYRTLHARDARWQFLGEQGEVAEEPGCIRVYPGYLYRRQP
Sequences:
>Translated_125_residues MKVSSHFLFTGAFVLTLLSLADQQYLMLPVAFLAIFLGLSAADREQLAEMSPRAAAMLLPASQRPLMPLDAFRGQDLMFY RAGSPVYRTLHARDARWQFLGEQGEVAEEPGCIRVYPGYLYRRQP >Mature_125_residues MKVSSHFLFTGAFVLTLLSLADQQYLMLPVAFLAIFLGLSAADREQLAEMSPRAAAMLLPASQRPLMPLDAFRGQDLMFY RAGSPVYRTLHARDARWQFLGEQGEVAEEPGCIRVYPGYLYRRQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14099; Mature: 14099
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSSHFLFTGAFVLTLLSLADQQYLMLPVAFLAIFLGLSAADREQLAEMSPRAAAMLLP CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEC ASQRPLMPLDAFRGQDLMFYRAGSPVYRTLHARDARWQFLGEQGEVAEEPGCIRVYPGYL CCCCCCCCHHHCCCCEEEEEECCCHHHHHHHCCCCHHEECCCCCCCCCCCCEEEECCCEE YRRQP EECCC >Mature Secondary Structure MKVSSHFLFTGAFVLTLLSLADQQYLMLPVAFLAIFLGLSAADREQLAEMSPRAAAMLLP CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEC ASQRPLMPLDAFRGQDLMFYRAGSPVYRTLHARDARWQFLGEQGEVAEEPGCIRVYPGYL CCCCCCCCHHHCCCCEEEEEECCCHHHHHHHCCCCHHEECCCCCCCCCCCCEEEECCCEE YRRQP EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA