| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499669
Identifier: 34499669
GI number: 34499669
Start: 4548729
End: 4549313
Strand: Reverse
Name: 34499669
Synonym: CV_4214
Alternate gene names: NA
Gene position: 4549313-4548729 (Counterclockwise)
Preceding gene: 34499670
Following gene: 34499664
Centisome position: 95.75
GC content: 69.57
Gene sequence:
>585_bases ATGCCGAGTGAGGGCCGCCTCGAACAACAGCTGAGCGGACTGGTTCTGGCCTCGCCCTGGCTGATGCGCGCCTTGCGCGC GGCCAGGGCGCTGGGCCTTTCCGACTGGTGCATCGGCGCCGGCGCGGTGCGCGGCCTGGTGTGGGACGCGCTGCATGGCT TCGCGTCCGAGCCTTCTGCCTTGTCCGATCTCGATCTGGTCTATTTCGACGCCGAAAACCTGTCGCCCGATCGCGAGGCC GCGCTGCAGCGCCGGCTGGCGTCCGTCCATCCCGACCTGCCTTGGGAGGTGACCAATCAGGCGGCGGTGCATCTGTGGTT TGCCGATCGTTTCGGCTACCCGGTCGAGCCCTTGCCGTCGCTGGAGGCGGCACTGGCGACCTGGCCGGAGTACGCGACCG CGGTCGGCGTCGCGCTGAACGCCGACGACAGCCTGCGCATCATCGCGCCTTTCGGGCTGGACGACCTGTTCGCCATGACG GTGCGCCGCAACCCGGCCAGGGCCAGCCTGGAGATTTACCGCCAGCGGGTGGCGCAGAAGCGCTACCAGGCGCGCTGGCC CCGGGTGACGGTGGTCCTGGAATGA
Upstream 100 bases:
>100_bases ATCGCCTGGGTGGTGCTGCTGTTCTTCCTGTGCGCGATGCTGGCCTACGCGATCATGCGCGCGGTGGAATTCCGCCGCGA AGAGGCCGGCCATCCGCGCG
Downstream 100 bases:
>100_bases AAAACGCCGGCGGGTTGCCGGCGTTTTTCATCAGGCGGCCGCTCAGCGGCCGATCTTCACTTGCGACCACAGGCGGTTCA GCTCGCGGCGGGACTTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPSEGRLEQQLSGLVLASPWLMRALRAARALGLSDWCIGAGAVRGLVWDALHGFASEPSALSDLDLVYFDAENLSPDREA ALQRRLASVHPDLPWEVTNQAAVHLWFADRFGYPVEPLPSLEAALATWPEYATAVGVALNADDSLRIIAPFGLDDLFAMT VRRNPARASLEIYRQRVAQKRYQARWPRVTVVLE
Sequences:
>Translated_194_residues MPSEGRLEQQLSGLVLASPWLMRALRAARALGLSDWCIGAGAVRGLVWDALHGFASEPSALSDLDLVYFDAENLSPDREA ALQRRLASVHPDLPWEVTNQAAVHLWFADRFGYPVEPLPSLEAALATWPEYATAVGVALNADDSLRIIAPFGLDDLFAMT VRRNPARASLEIYRQRVAQKRYQARWPRVTVVLE >Mature_193_residues PSEGRLEQQLSGLVLASPWLMRALRAARALGLSDWCIGAGAVRGLVWDALHGFASEPSALSDLDLVYFDAENLSPDREAA LQRRLASVHPDLPWEVTNQAAVHLWFADRFGYPVEPLPSLEAALATWPEYATAVGVALNADDSLRIIAPFGLDDLFAMTV RRNPARASLEIYRQRVAQKRYQARWPRVTVVLE
Specific function: Unknown
COG id: COG3575
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21534; Mature: 21403
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSEGRLEQQLSGLVLASPWLMRALRAARALGLSDWCIGAGAVRGLVWDALHGFASEPSA CCCCCHHHHHHCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC LSDLDLVYFDAENLSPDREAALQRRLASVHPDLPWEVTNQAAVHLWFADRFGYPVEPLPS CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCEEEEEEEECCCCCCCCCCCH LEAALATWPEYATAVGVALNADDSLRIIAPFGLDDLFAMTVRRNPARASLEIYRQRVAQK HHHHHHHCHHHHHHHEEEECCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH RYQARWPRVTVVLE HHHCCCCEEEEEEC >Mature Secondary Structure PSEGRLEQQLSGLVLASPWLMRALRAARALGLSDWCIGAGAVRGLVWDALHGFASEPSA CCCCHHHHHHCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC LSDLDLVYFDAENLSPDREAALQRRLASVHPDLPWEVTNQAAVHLWFADRFGYPVEPLPS CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEECCCEEEEEEEECCCCCCCCCCCH LEAALATWPEYATAVGVALNADDSLRIIAPFGLDDLFAMTVRRNPARASLEIYRQRVAQK HHHHHHHCHHHHHHHEEEECCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHH RYQARWPRVTVVLE HHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA