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The map label for this gene is fdx1 [H]

Identifier: 34499656

GI number: 34499656

Start: 4533819

End: 4534070

Strand: Reverse

Name: fdx1 [H]

Synonym: CV_4201

Alternate gene names: 34499656

Gene position: 4534070-4533819 (Counterclockwise)

Preceding gene: 34499657

Following gene: 34499655

Centisome position: 95.43

GC content: 57.14

Gene sequence:

>252_bases
ATGTCTTTGATGATTACCGACGAATGCATCAACTGCGACGTCTGTGAGCCGGAGTGCCCGAACAACGCGATCTCCCAAGG
CGAGGAGATCTATCAGATCGACCCCAATCTGTGCACCCAGTGCGTGGGCCACTACGACGAGCCGCAGTGCCAGCAAGTCT
GTCCGGTGGACTGCATCCCGCTGGATCCGGCCCATGAGGAGACCCAGGAAGAGCTCCATCAGAAGTATTTGAAAATTTCC
GGCCAGGCCTGA

Upstream 100 bases:

>100_bases
GCCGGAGGGTTCGCGCCTATATGGATATAACCAGCGCGAACTTGCGACCCCGGTCGGCGGATGACAGAATTCATGTTGTG
GAATACTTGAGGAAATTACT

Downstream 100 bases:

>100_bases
TGGCGCTAAGCTTTTGATGTATAAAAGAATGCCTCGCGACCCGCGGGGCGTTTTTTATTTTTCAGCGAAAAAATGCAATT
TTTTTCGCGAAAGGTGTTGA

Product: ferredoxin [4Fe-4S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MSLMITDECINCDVCEPECPNNAISQGEEIYQIDPNLCTQCVGHYDEPQCQQVCPVDCIPLDPAHEETQEELHQKYLKIS
GQA

Sequences:

>Translated_83_residues
MSLMITDECINCDVCEPECPNNAISQGEEIYQIDPNLCTQCVGHYDEPQCQQVCPVDCIPLDPAHEETQEELHQKYLKIS
GQA
>Mature_82_residues
SLMITDECINCDVCEPECPNNAISQGEEIYQIDPNLCTQCVGHYDEPQCQQVCPVDCIPLDPAHEETQEELHQKYLKISG
QA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=78, Percent_Identity=58.974358974359, Blast_Score=100, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9340; Mature: 9209

Theoretical pI: Translated: 3.73; Mature: 3.73

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
13.3 %Cys+Met (Translated Protein)
11.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
12.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMITDECINCDVCEPECPNNAISQGEEIYQIDPNLCTQCVGHYDEPQCQQVCPVDCIP
CCEEECCCCCCCCCCCCCCCCCCHHCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCC
LDPAHEETQEELHQKYLKISGQA
CCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLMITDECINCDVCEPECPNNAISQGEEIYQIDPNLCTQCVGHYDEPQCQQVCPVDCIP
CEEECCCCCCCCCCCCCCCCCCHHCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCC
LDPAHEETQEELHQKYLKISGQA
CCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]