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The map label for this gene is ydjR [C]

Identifier: 34499560

GI number: 34499560

Start: 4447303

End: 4447872

Strand: Reverse

Name: ydjR [C]

Synonym: CV_4105

Alternate gene names: 34499560

Gene position: 4447872-4447303 (Counterclockwise)

Preceding gene: 34499561

Following gene: 34499558

Centisome position: 93.62

GC content: 70.88

Gene sequence:

>570_bases
ATGCGCGTACTGAGCCGACAGAGTTTCCAGGACATGCCGTGGGCCAATGGCGGCGGACGCACCTGCGAGTTGTTCCGCCT
GCCGCATCCGGACCGGCGCGACGCGTTCGCGCTGCGGCTATCCATCGCCGAAGTGGCCGAAGGCGGGCCGTTTTCCCACT
TCGCCGGCGTCGACCGCTTGCTGGGCCTGCTGGAAGGCGAGGGCATGGAGTTGAGCCTGGCCGACGGCCGCAGGCTGACG
CTGGACGCGCCGGGGCAGGTGGTGGCTTTCACCGGCGAGATCGGCATCCAGTGCCGGTTGCTGGGCGGGCCGCTGCACGA
CTGCAACCTGATGCTGGCGCGCGACTGGGGACGGGGCGATCTGGAGCGGCTGTCGCCGGCGGACGGAGAAACCGCGCGGC
TGGAAGCCGCGGATCTGGTCCTGCTGTATCTGCAGCGCGGCGAGTGGTCGCGCGACGGCGAGGATTTGCCGAGCGGCAGC
CTGCTGCTATTGGAGAACGAGGCCGCCAGCCTGCGCGCGAAGGACGGCGCGATCGCGTGGCTGGCCACCGCGCGCCGCCT
TCCGGCGTGA

Upstream 100 bases:

>100_bases
GTGATCTTGCAACAGGCGGAAGCCGAGCGCTGAGCGCTGCTGTTCAGCGCAACGCCCATCCGGCATGATGCCGGGTGGGC
GTTTTGAATCGGGAGGCGCC

Downstream 100 bases:

>100_bases
CGCGGTCGCGGGCATGAAAAAGCCGGGCGCGCGCCCGGCTCGGTTCTGGCCGCGTAACGTCACAGCCCGAGCTCGCTCCA
CAGCGCGTCGACGCGCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MRVLSRQSFQDMPWANGGGRTCELFRLPHPDRRDAFALRLSIAEVAEGGPFSHFAGVDRLLGLLEGEGMELSLADGRRLT
LDAPGQVVAFTGEIGIQCRLLGGPLHDCNLMLARDWGRGDLERLSPADGETARLEAADLVLLYLQRGEWSRDGEDLPSGS
LLLLENEAASLRAKDGAIAWLATARRLPA

Sequences:

>Translated_189_residues
MRVLSRQSFQDMPWANGGGRTCELFRLPHPDRRDAFALRLSIAEVAEGGPFSHFAGVDRLLGLLEGEGMELSLADGRRLT
LDAPGQVVAFTGEIGIQCRLLGGPLHDCNLMLARDWGRGDLERLSPADGETARLEAADLVLLYLQRGEWSRDGEDLPSGS
LLLLENEAASLRAKDGAIAWLATARRLPA
>Mature_189_residues
MRVLSRQSFQDMPWANGGGRTCELFRLPHPDRRDAFALRLSIAEVAEGGPFSHFAGVDRLLGLLEGEGMELSLADGRRLT
LDAPGQVVAFTGEIGIQCRLLGGPLHDCNLMLARDWGRGDLERLSPADGETARLEAADLVLLYLQRGEWSRDGEDLPSGS
LLLLENEAASLRAKDGAIAWLATARRLPA

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 20560; Mature: 20560

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLSRQSFQDMPWANGGGRTCELFRLPHPDRRDAFALRLSIAEVAEGGPFSHFAGVDRL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHH
LGLLEGEGMELSLADGRRLTLDAPGQVVAFTGEIGIQCRLLGGPLHDCNLMLARDWGRGD
HHHHCCCCCEEEECCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCC
LERLSPADGETARLEAADLVLLYLQRGEWSRDGEDLPSGSLLLLENEAASLRAKDGAIAW
HHHCCCCCCCEEEEHHHHEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEE
LATARRLPA
EEEHHCCCC
>Mature Secondary Structure
MRVLSRQSFQDMPWANGGGRTCELFRLPHPDRRDAFALRLSIAEVAEGGPFSHFAGVDRL
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEHHHHHCCCCCHHHHHHHHH
LGLLEGEGMELSLADGRRLTLDAPGQVVAFTGEIGIQCRLLGGPLHDCNLMLARDWGRGD
HHHHCCCCCEEEECCCCEEEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCC
LERLSPADGETARLEAADLVLLYLQRGEWSRDGEDLPSGSLLLLENEAASLRAKDGAIAW
HHHCCCCCCCEEEEHHHHEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEE
LATARRLPA
EEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]