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The map label for this gene is yniC [C]

Identifier: 34499553

GI number: 34499553

Start: 4439859

End: 4440494

Strand: Direct

Name: yniC [C]

Synonym: CV_4098

Alternate gene names: 34499553

Gene position: 4439859-4440494 (Clockwise)

Preceding gene: 34499552

Following gene: 34499559

Centisome position: 93.45

GC content: 61.48

Gene sequence:

>636_bases
GTGAACCACAAGACCTGGATCTTCGACCTCGACGACACCCTCCACCACGCCAGCGGCGGCATCTTCGACCATATCAACAA
GCTGATGACCGAATACATGATGCGCCAACTCGGCGTGGACGAGGCGGAGGCCTGCGCGCTGCGCTCCCGCTACTGGGCCC
AGTACGGCGCGACCATGCACGGCCTGTCCACCCATCACGGCATCGATCCGCAACAGTTCCTGATCGAGACCCACCCGGTG
GAGGTATTGGAACAGTGGCTGCAATTCGAAGACAGGCTGGCGGAAAACCTGAGCGCGCTGCCCGGCCGCAAGATCATCCT
GTCCAACGGACCGCAGCATTACGTGGAAGGCATCCTGCAGCGGATGCGGATACAGCATCATTTCGAATCGGTATACGGCG
TGGAGCGGCTGAACTATGTGCCCAAGCCTCACCTTGACGCTTTCCAGACCGTCCTGGCACGCGAAGGCCTGAATCCCGCT
CACTGCATCATGGTGGAGGATTCGCTGCCCAATCTGCTGACGGCGAAGGAGCTGGGCATGACCACGATCTGGGTAAGCCG
CGAGCCGCGCAAGCCGGCGCACGTCGATCACCGCGTCGAGAAGATCAGCCAGTTGCTGCGGCTACACCTGGACTGA

Upstream 100 bases:

>100_bases
ATAGAAACAGGATTTGAAGCTGCCATGCAATGGCCTCCACTAGCCTGCCGGCCGCCATGAATGGATAATCTGCGGTCCAC
CTTTTCATGCAGCATCGAAC

Downstream 100 bases:

>100_bases
CCCAGCACACATATATAGAAAAAGGCCGGGAAACTTCCCGGCCTTTTTGCTGAATCGCGCGGACCCTCTTACTTCAGCTT
GATCTCGGACCACACCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNHKTWIFDLDDTLHHASGGIFDHINKLMTEYMMRQLGVDEAEACALRSRYWAQYGATMHGLSTHHGIDPQQFLIETHPV
EVLEQWLQFEDRLAENLSALPGRKIILSNGPQHYVEGILQRMRIQHHFESVYGVERLNYVPKPHLDAFQTVLAREGLNPA
HCIMVEDSLPNLLTAKELGMTTIWVSREPRKPAHVDHRVEKISQLLRLHLD

Sequences:

>Translated_211_residues
MNHKTWIFDLDDTLHHASGGIFDHINKLMTEYMMRQLGVDEAEACALRSRYWAQYGATMHGLSTHHGIDPQQFLIETHPV
EVLEQWLQFEDRLAENLSALPGRKIILSNGPQHYVEGILQRMRIQHHFESVYGVERLNYVPKPHLDAFQTVLAREGLNPA
HCIMVEDSLPNLLTAKELGMTTIWVSREPRKPAHVDHRVEKISQLLRLHLD
>Mature_211_residues
MNHKTWIFDLDDTLHHASGGIFDHINKLMTEYMMRQLGVDEAEACALRSRYWAQYGATMHGLSTHHGIDPQQFLIETHPV
EVLEQWLQFEDRLAENLSALPGRKIILSNGPQHYVEGILQRMRIQHHFESVYGVERLNYVPKPHLDAFQTVLAREGLNPA
HCIMVEDSLPNLLTAKELGMTTIWVSREPRKPAHVDHRVEKISQLLRLHLD

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24407; Mature: 24407

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHKTWIFDLDDTLHHASGGIFDHINKLMTEYMMRQLGVDEAEACALRSRYWAQYGATMH
CCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHH
GLSTHHGIDPQQFLIETHPVEVLEQWLQFEDRLAENLSALPGRKIILSNGPQHYVEGILQ
CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
RMRIQHHFESVYGVERLNYVPKPHLDAFQTVLAREGLNPAHCIMVEDSLPNLLTAKELGM
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCC
TTIWVSREPRKPAHVDHRVEKISQLLRLHLD
EEEEECCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNHKTWIFDLDDTLHHASGGIFDHINKLMTEYMMRQLGVDEAEACALRSRYWAQYGATMH
CCCCEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHH
GLSTHHGIDPQQFLIETHPVEVLEQWLQFEDRLAENLSALPGRKIILSNGPQHYVEGILQ
CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH
RMRIQHHFESVYGVERLNYVPKPHLDAFQTVLAREGLNPAHCIMVEDSLPNLLTAKELGM
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCCC
TTIWVSREPRKPAHVDHRVEKISQLLRLHLD
EEEEECCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA