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The map label for this gene is ppdB [C]

Identifier: 34499536

GI number: 34499536

Start: 4418386

End: 4418973

Strand: Direct

Name: ppdB [C]

Synonym: CV_4081

Alternate gene names: 34499536

Gene position: 4418386-4418973 (Clockwise)

Preceding gene: 34499535

Following gene: 34499537

Centisome position: 93.0

GC content: 66.67

Gene sequence:

>588_bases
ATGAAATCCGCGCGCGGCATCAGCCTGCTGGAGCTGCTGGTCAGCATGACCATAGGCCTGCTGCTGCTGCTGATCGTGTC
CGGCCTGCTGGTCAGCTTGCTGGGCGAGCAGAGCCGCGAGCGCCGCCAGGCGCAGCTGGGCGCGATGATGGACGCGTCGC
TGTCGCTGATGGCGATGGAACTTCGCCGCGCCGGTTTCTGGAACGGTTCCGGCGCGGAAGAAGACAATCCCTACCGCGAA
CTGTTCATCGAGCGAGACGGAAGCTGCCTGCTCTACGGCTACGACAATCCGGCCACGCCCTCCGTCACGCCCAGCCTCCG
TTACTTCGCCTTCCGCCTGAGCAATCAACGCATCCAGCGGCGCAGCAGCGGCAAGGCCGACTGGAACTGCGACGCGCCCA
GCGGCTGGGACGACCTGAGCAAGCCCGACATCGGCGTGGTCGACATGCTGAGCTTTCGTTCCGAAGCCGGCGGCAGCGCG
ATCGGCATCGCCGTCAGCGCGCGCGCGGCCAAGGGTTCCGGCGAAGAAAGGCTGGACATCCGCACCAGCGTGACGCTGCG
CAACCAGCCCGAGGTCAAGGGGCCATGA

Upstream 100 bases:

>100_bases
TCGGCGGACTGCGGCTGCGGCTCAGCCGCTCCGGCTGCCGGCCGGCGGATCTGCAGTTGCTGCCCACCGGCCTGGTCATC
GTCGGCGAGGCCCGCTGCCC

Downstream 100 bases:

>100_bases
AGCGTCGATCTGCGGGGCTGACCACGCTGTTCGCGGTGCTGACCTTGCTCGCGATCGCCAGCCTGGTGCTGCTGGCCGCC
TCGCGCCAGCTGGTGTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKSARGISLLELLVSMTIGLLLLLIVSGLLVSLLGEQSRERRQAQLGAMMDASLSLMAMELRRAGFWNGSGAEEDNPYRE
LFIERDGSCLLYGYDNPATPSVTPSLRYFAFRLSNQRIQRRSSGKADWNCDAPSGWDDLSKPDIGVVDMLSFRSEAGGSA
IGIAVSARAAKGSGEERLDIRTSVTLRNQPEVKGP

Sequences:

>Translated_195_residues
MKSARGISLLELLVSMTIGLLLLLIVSGLLVSLLGEQSRERRQAQLGAMMDASLSLMAMELRRAGFWNGSGAEEDNPYRE
LFIERDGSCLLYGYDNPATPSVTPSLRYFAFRLSNQRIQRRSSGKADWNCDAPSGWDDLSKPDIGVVDMLSFRSEAGGSA
IGIAVSARAAKGSGEERLDIRTSVTLRNQPEVKGP
>Mature_195_residues
MKSARGISLLELLVSMTIGLLLLLIVSGLLVSLLGEQSRERRQAQLGAMMDASLSLMAMELRRAGFWNGSGAEEDNPYRE
LFIERDGSCLLYGYDNPATPSVTPSLRYFAFRLSNQRIQRRSSGKADWNCDAPSGWDDLSKPDIGVVDMLSFRSEAGGSA
IGIAVSARAAKGSGEERLDIRTSVTLRNQPEVKGP

Specific function: Not Yet Known. [C]

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21242; Mature: 21242

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSARGISLLELLVSMTIGLLLLLIVSGLLVSLLGEQSRERRQAQLGAMMDASLSLMAME
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRAGFWNGSGAEEDNPYRELFIERDGSCLLYGYDNPATPSVTPSLRYFAFRLSNQRIQR
HHHCCCCCCCCCCCCCHHHHEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
RSSGKADWNCDAPSGWDDLSKPDIGVVDMLSFRSEAGGSAIGIAVSARAAKGSGEERLDI
HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEE
RTSVTLRNQPEVKGP
EEEEEECCCCCCCCC
>Mature Secondary Structure
MKSARGISLLELLVSMTIGLLLLLIVSGLLVSLLGEQSRERRQAQLGAMMDASLSLMAME
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRAGFWNGSGAEEDNPYRELFIERDGSCLLYGYDNPATPSVTPSLRYFAFRLSNQRIQR
HHHCCCCCCCCCCCCCHHHHEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
RSSGKADWNCDAPSGWDDLSKPDIGVVDMLSFRSEAGGSAIGIAVSARAAKGSGEERLDI
HCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEE
RTSVTLRNQPEVKGP
EEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA