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The map label for this gene is ppdD [C]

Identifier: 34499534

GI number: 34499534

Start: 4417440

End: 4417883

Strand: Direct

Name: ppdD [C]

Synonym: CV_4079

Alternate gene names: 34499534

Gene position: 4417440-4417883 (Clockwise)

Preceding gene: 34499533

Following gene: 34499535

Centisome position: 92.98

GC content: 69.59

Gene sequence:

>444_bases
ATGAACCGCGATCTTCCCGCCTCTTTATCCCCCCGCGGTTTCTCGCTGCTGGAGTTGCTGATCGCGCTGGCGGTGGTGGC
CATCCTGGCCGGCGTCGCCGTTCCGTCCTACCAGAGCTACATGCAGCGCAGCCGCCGCAGCGATGCGCTGGACGCGCTGT
ACCAGCTGCAGCAGGCCCAGTTGCGTTACCGGGGCTTCAACGCCGGCTACGCCGCCAGGCTGGCCGACCTGAAAACGCCT
TACGTCGGCGGCGCCAGCGCCCAGGGGCATTACCAGCTCGAAACAGGCATCAGGCCCGGGGACAACCCGGCGTCCGACTT
CTACGTCCAGGCCACGGCCAAGCCCGGCGGCGCCCAGGCCGGCGACCGCGATTGCCAGACCCTCACCCTCACCCAGCGGC
AGCAGACGGTCAGCCTGACGCCGCCGGCCTGCTGGGGGCGATGA

Upstream 100 bases:

>100_bases
TGATCCGGCCCGCCGGCTTGACTGCGCCGGCCGCGGCTTCTAGGACACAGTAGGGACGCGCGATGCAGCCCCCCAACCCG
TCCCCGGAGTCCGCCGCCAG

Downstream 100 bases:

>100_bases
TGCGTCGCGCGCAGCGGGGCGTCACCCTGATCGAGCTGATGGTGGTGCTGGCTCTGGCGCTGGTGCTGCTGACCCAGGCG
TTGCCGGCGCTGGGCCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNRDLPASLSPRGFSLLELLIALAVVAILAGVAVPSYQSYMQRSRRSDALDALYQLQQAQLRYRGFNAGYAARLADLKTP
YVGGASAQGHYQLETGIRPGDNPASDFYVQATAKPGGAQAGDRDCQTLTLTQRQQTVSLTPPACWGR

Sequences:

>Translated_147_residues
MNRDLPASLSPRGFSLLELLIALAVVAILAGVAVPSYQSYMQRSRRSDALDALYQLQQAQLRYRGFNAGYAARLADLKTP
YVGGASAQGHYQLETGIRPGDNPASDFYVQATAKPGGAQAGDRDCQTLTLTQRQQTVSLTPPACWGR
>Mature_147_residues
MNRDLPASLSPRGFSLLELLIALAVVAILAGVAVPSYQSYMQRSRRSDALDALYQLQQAQLRYRGFNAGYAARLADLKTP
YVGGASAQGHYQLETGIRPGDNPASDFYVQATAKPGGAQAGDRDCQTLTLTQRQQTVSLTPPACWGR

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15861; Mature: 15861

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRDLPASLSPRGFSLLELLIALAVVAILAGVAVPSYQSYMQRSRRSDALDALYQLQQAQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
LRYRGFNAGYAARLADLKTPYVGGASAQGHYQLETGIRPGDNPASDFYVQATAKPGGAQA
HHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCC
GDRDCQTLTLTQRQQTVSLTPPACWGR
CCCCCEEEEEECCCCEEECCCCCCCCC
>Mature Secondary Structure
MNRDLPASLSPRGFSLLELLIALAVVAILAGVAVPSYQSYMQRSRRSDALDALYQLQQAQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
LRYRGFNAGYAARLADLKTPYVGGASAQGHYQLETGIRPGDNPASDFYVQATAKPGGAQA
HHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCC
GDRDCQTLTLTQRQQTVSLTPPACWGR
CCCCCEEEEEECCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA