| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is prsA
Identifier: 34499513
GI number: 34499513
Start: 4388195
End: 4389178
Strand: Reverse
Name: prsA
Synonym: CV_4058
Alternate gene names: 34499513
Gene position: 4389178-4388195 (Counterclockwise)
Preceding gene: 34499514
Following gene: 34499512
Centisome position: 92.38
GC content: 62.91
Gene sequence:
>984_bases ATGGCGGCATACGACAGTTTGATGGTATTTACCGGTACGGCTAATCCGGAACTTGCTCAGAACGTAGTCAAACATTTGGA TATTTCGTTGGGACGCGCCGATGTCGGCAAGTTCAGCGACGGCGAAGTGGCGGTGGAACTGCTGGAAAACGTTCGCGGCC GCGACGTTTTCATTCTGCAATCCACCTGTGCGCCGACCAACGACAACCTGATGGAAATCCTGACCATGGCCGACGCGCTC AAGCGCGCTTCCGCCGGTCGGATCACCGCGGCGATTCCGTATTTCGGCTACGCCCGCCAGGATCGCCGTCCGCGTTCCGC CCGCGTGCCGATCTCGGCCAAGCTGGTGGCCAATATGCTGACCAGCGCCGGCATCGACCGCGTGCTCACCGTCGACCTGC ATGCCGACCAGATCCAGGGCTTCTTCGACATCCCGGTGGACAACGTGTATGCGACCCCGGTGTTGCTGAAAGACATCCGC GCCCAGCGCTTCGACGATCTGATCGTGGTCAGCCCGGACGTGGGCGGCGTGGTCCGCGCCCGCGCGGTGGCCAAGGCGCT GAACACCGACCTGGCGATCATCGACAAGCGCCGTCCGAAAGCCAATGTGGCCGAAGTGATGAACATCATCGGCGACGTGT CGGGCCGTACCTGCCTGATCGTCGACGACATGATCGACACCGCCAACACGCTGTGCAAGGCGGCCAGCGCTCTGAAGGAG CGCGGCGCCGAGCGCGTGCTGGCCTATGCGACCCACGCCATCTTCTCCGGACAGGCGGTGGATCGCATCAAGAATTCCGA CATCGACATGGTGGTGGTGACCGACACCATCCCGTTGACCGCCGCGGCCAAGGCCTGCCCGAACATCCGGGTCGCCTCGA TCGCCGGCCTGCTGGCGGAGACGCTGCGCAGGATCAACAACGAAGAATCGGTGTCCTACCTCTTCAATGAGGAACTGGTT GCGACGGGCGCTTGCCTGCCGTGA
Upstream 100 bases:
>100_bases CTCCCCAGCCAGGACTTTCTCCGAATAAGAGAGAGCATGAAAAAAGCGTGTAAGAGAGCCTTACACGCTTTTTCTTTATC CAGCTAAGGCAAAGCGAATC
Downstream 100 bases:
>100_bases ACATCTGGCTCGCTGGTCGCGGCGGGCCGGGTGCTTTTAATCTGAAACTGGAGTTTTGACATGTCTTACGAACTGATCGC CGCCAAGCGCGTTGACCTGG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MAAYDSLMVFTGTANPELAQNVVKHLDISLGRADVGKFSDGEVAVELLENVRGRDVFILQSTCAPTNDNLMEILTMADAL KRASAGRITAAIPYFGYARQDRRPRSARVPISAKLVANMLTSAGIDRVLTVDLHADQIQGFFDIPVDNVYATPVLLKDIR AQRFDDLIVVSPDVGGVVRARAVAKALNTDLAIIDKRRPKANVAEVMNIIGDVSGRTCLIVDDMIDTANTLCKAASALKE RGAERVLAYATHAIFSGQAVDRIKNSDIDMVVVTDTIPLTAAAKACPNIRVASIAGLLAETLRRINNEESVSYLFNEELV ATGACLP
Sequences:
>Translated_327_residues MAAYDSLMVFTGTANPELAQNVVKHLDISLGRADVGKFSDGEVAVELLENVRGRDVFILQSTCAPTNDNLMEILTMADAL KRASAGRITAAIPYFGYARQDRRPRSARVPISAKLVANMLTSAGIDRVLTVDLHADQIQGFFDIPVDNVYATPVLLKDIR AQRFDDLIVVSPDVGGVVRARAVAKALNTDLAIIDKRRPKANVAEVMNIIGDVSGRTCLIVDDMIDTANTLCKAASALKE RGAERVLAYATHAIFSGQAVDRIKNSDIDMVVVTDTIPLTAAAKACPNIRVASIAGLLAETLRRINNEESVSYLFNEELV ATGACLP >Mature_326_residues AAYDSLMVFTGTANPELAQNVVKHLDISLGRADVGKFSDGEVAVELLENVRGRDVFILQSTCAPTNDNLMEILTMADALK RASAGRITAAIPYFGYARQDRRPRSARVPISAKLVANMLTSAGIDRVLTVDLHADQIQGFFDIPVDNVYATPVLLKDIRA QRFDDLIVVSPDVGGVVRARAVAKALNTDLAIIDKRRPKANVAEVMNIIGDVSGRTCLIVDDMIDTANTLCKAASALKER GAERVLAYATHAIFSGQAVDRIKNSDIDMVVVTDTIPLTAAAKACPNIRVASIAGLLAETLRRINNEESVSYLFNEELVA TGACLP
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family
Homologues:
Organism=Homo sapiens, GI4506127, Length=314, Percent_Identity=51.2738853503185, Blast_Score=317, Evalue=1e-86, Organism=Homo sapiens, GI4506129, Length=314, Percent_Identity=50.6369426751592, Blast_Score=316, Evalue=2e-86, Organism=Homo sapiens, GI84875539, Length=316, Percent_Identity=50, Blast_Score=314, Evalue=6e-86, Organism=Homo sapiens, GI28557709, Length=314, Percent_Identity=50.9554140127389, Blast_Score=314, Evalue=8e-86, Organism=Homo sapiens, GI194018537, Length=331, Percent_Identity=38.0664652567976, Blast_Score=201, Evalue=9e-52, Organism=Homo sapiens, GI4506133, Length=345, Percent_Identity=35.9420289855072, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI310128524, Length=149, Percent_Identity=35.5704697986577, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI310115209, Length=149, Percent_Identity=35.5704697986577, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI310118259, Length=149, Percent_Identity=35.5704697986577, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI310119946, Length=149, Percent_Identity=35.5704697986577, Blast_Score=92, Evalue=8e-19, Organism=Escherichia coli, GI1787458, Length=312, Percent_Identity=67.6282051282051, Blast_Score=441, Evalue=1e-125, Organism=Caenorhabditis elegans, GI17554702, Length=314, Percent_Identity=48.4076433121019, Blast_Score=308, Evalue=4e-84, Organism=Caenorhabditis elegans, GI17554704, Length=314, Percent_Identity=48.7261146496815, Blast_Score=308, Evalue=4e-84, Organism=Caenorhabditis elegans, GI25149168, Length=314, Percent_Identity=48.4076433121019, Blast_Score=307, Evalue=4e-84, Organism=Caenorhabditis elegans, GI71989924, Length=314, Percent_Identity=48.4076433121019, Blast_Score=306, Evalue=1e-83, Organism=Caenorhabditis elegans, GI17570245, Length=344, Percent_Identity=33.4302325581395, Blast_Score=195, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6319403, Length=319, Percent_Identity=46.0815047021944, Blast_Score=277, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6321776, Length=300, Percent_Identity=48, Blast_Score=275, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6320946, Length=316, Percent_Identity=43.9873417721519, Blast_Score=265, Evalue=6e-72, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=41.3265306122449, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6324511, Length=114, Percent_Identity=42.1052631578947, Blast_Score=101, Evalue=2e-22, Organism=Drosophila melanogaster, GI21355239, Length=313, Percent_Identity=51.1182108626198, Blast_Score=311, Evalue=5e-85, Organism=Drosophila melanogaster, GI45551540, Length=335, Percent_Identity=47.7611940298507, Blast_Score=302, Evalue=2e-82, Organism=Drosophila melanogaster, GI24651458, Length=354, Percent_Identity=34.180790960452, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651456, Length=354, Percent_Identity=34.180790960452, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI281362873, Length=355, Percent_Identity=34.3661971830986, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651454, Length=355, Percent_Identity=34.3661971830986, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651462, Length=202, Percent_Identity=35.6435643564356, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI24651464, Length=202, Percent_Identity=35.6435643564356, Blast_Score=134, Evalue=7e-32, Organism=Drosophila melanogaster, GI45552010, Length=203, Percent_Identity=35.9605911330049, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): KPRS_CHRVO (Q7NQS9)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903728.1 - ProteinModelPortal: Q7NQS9 - SMR: Q7NQS9 - GeneID: 2550095 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_4058 - NMPDR: fig|243365.1.peg.4058 - HOGENOM: HBG519284 - OMA: YKTAGAD - PhylomeDB: Q7NQS9 - ProtClustDB: PRK01259 - BioCyc: CVIO243365:CV_4058-MONOMER - BRENDA: 2.7.6.1 - GO: GO:0005737 - HAMAP: MF_00583_B - InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 - TIGRFAMs: TIGR01251
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.7.6.1
Molecular weight: Translated: 35195; Mature: 35064
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: PS00114 PRPP_SYNTHASE; PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAYDSLMVFTGTANPELAQNVVKHLDISLGRADVGKFSDGEVAVELLENVRGRDVFILQ CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEE STCAPTNDNLMEILTMADALKRASAGRITAAIPYFGYARQDRRPRSARVPISAKLVANML CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCCCHHHHHHHHHH TSAGIDRVLTVDLHADQIQGFFDIPVDNVYATPVLLKDIRAQRFDDLIVVSPDVGGVVRA HHCCCCEEEEEEEEHHHCCCEEECCCCCEEECHHHHHHHHHHHCCCEEEECCCCCHHHHH RAVAKALNTDLAIIDKRRPKANVAEVMNIIGDVSGRTCLIVDDMIDTANTLCKAASALKE HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH RGAERVLAYATHAIFSGQAVDRIKNSDIDMVVVTDTIPLTAAAKACPNIRVASIAGLLAE CCHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHH TLRRINNEESVSYLFNEELVATGACLP HHHHCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AAYDSLMVFTGTANPELAQNVVKHLDISLGRADVGKFSDGEVAVELLENVRGRDVFILQ CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEE STCAPTNDNLMEILTMADALKRASAGRITAAIPYFGYARQDRRPRSARVPISAKLVANML CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCCCHHHHHHHHHH TSAGIDRVLTVDLHADQIQGFFDIPVDNVYATPVLLKDIRAQRFDDLIVVSPDVGGVVRA HHCCCCEEEEEEEEHHHCCCEEECCCCCEEECHHHHHHHHHHHCCCEEEECCCCCHHHHH RAVAKALNTDLAIIDKRRPKANVAEVMNIIGDVSGRTCLIVDDMIDTANTLCKAASALKE HHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHH RGAERVLAYATHAIFSGQAVDRIKNSDIDMVVVTDTIPLTAAAKACPNIRVASIAGLLAE CCHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHH TLRRINNEESVSYLFNEELVATGACLP HHHHCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782