| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499503
Identifier: 34499503
GI number: 34499503
Start: 4378919
End: 4379974
Strand: Reverse
Name: 34499503
Synonym: CV_4048
Alternate gene names: NA
Gene position: 4379974-4378919 (Counterclockwise)
Preceding gene: 34499504
Following gene: 34499501
Centisome position: 92.19
GC content: 71.78
Gene sequence:
>1056_bases ATGTCGGCGGCGAAATGGCAGCCATTGCCACTGAAACTTCCGGTAATACAGGCGCCGATGGCCGGCGGCGCGACGACGCC GCAACTGGTGGCCGCGGTGGGCGAGGCCGGCGGCTTGGGTTTCCTGGCCGGCGCGATGCTGTCCCCGGCGCAGATCCGGG AAGAGGCCGGCAGCATCCGCGCCTTGAGCGACAAGCCGTTCGGGATCAATCTATTCGTCCAGGGGCCGCCGCAACCGGAT TCGGGCGAGCTGGCGCTGGCGCTGGATCTGCTCAAGCCCTGGCATGCCGAGCTGGGCTTGGGCGAGCCCGTGGCCCCGGC CAGCTACTGCCAGCCTTTCGACCAGCAGCTGGAGACGGTGCTTGAGTTGAAGCCGGCGGTGGCCAGCTTCGCTTTCGGCA TCCTGGACGCGGCGCAGATGCGCGCGCTGCGCGGCGCCGGGATTCTGGTGGTCGGCACCGCCACCAATCTGGCCGAGGGA CTGGCCTGGGCTCAGCTGGGCGCGGACGCGGTGTGCGCGCAGGGGCGCGAGGCGGGCGGCCACCGCGGCACCTTCATCGG CGAGCAGCGGCAATCGCTGCGGCCGATGCTGTCGCTGGCGTACGAGCTGGCGCAGAACCTGCCGCTGCCGGTGATCGCCG CCGGCGGCATCATGCACGGCCGGGACATCGCCGCCGCGATGCGCCACGGCGCGGTCGCCTGCCAGCTGGGCACCGCCTTC CTGCGCTGCCCGGAGTCCGGCATCTCGCCGTTGTGGAAACAGGCGCTGGCTGCGGCGAAGCCGGGATCCACCCGGCTGAC CCGGGCGTTTTCCGGCCGCTACGCCCGCGGCCTGGACAACCGCTATATGGCAGAGATGGCGCAGTGGCAGGACCGGCTGC CGGCTTATCCAGTGATGAACGCGCTGACCGGCGCCATGCGCGCGGCCGCCGCCAAGGCCGGCCGCAGCGAACTGATGTCG TTGTGGGCGGGCGAGGGCGTCGCCGACGCGCGCGAGATGCCGGCGGCGGAACTGATCGCCCAGCTGCAGGCGGAGTGGCA GGCCGCCTACCGCTAG
Upstream 100 bases:
>100_bases GGACGACATCCTGGCGGACCTGGAGCAGGCGCTGCGCGATTGAACGGTCCGGGCGCGGGGCCCGGATGGCTGGCAAGATC CAATAACAAGGAGAATGCGG
Downstream 100 bases:
>100_bases TCTTCGCCGCGGTAGATGGCGACGGTGCGTAAGCCCGCGCCGTCTATCGCCGCGCGGTACATGCCCTCGCAGTTGAACGG CAACGCCACCCGGCCGTAGC
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSAAKWQPLPLKLPVIQAPMAGGATTPQLVAAVGEAGGLGFLAGAMLSPAQIREEAGSIRALSDKPFGINLFVQGPPQPD SGELALALDLLKPWHAELGLGEPVAPASYCQPFDQQLETVLELKPAVASFAFGILDAAQMRALRGAGILVVGTATNLAEG LAWAQLGADAVCAQGREAGGHRGTFIGEQRQSLRPMLSLAYELAQNLPLPVIAAGGIMHGRDIAAAMRHGAVACQLGTAF LRCPESGISPLWKQALAAAKPGSTRLTRAFSGRYARGLDNRYMAEMAQWQDRLPAYPVMNALTGAMRAAAAKAGRSELMS LWAGEGVADAREMPAAELIAQLQAEWQAAYR
Sequences:
>Translated_351_residues MSAAKWQPLPLKLPVIQAPMAGGATTPQLVAAVGEAGGLGFLAGAMLSPAQIREEAGSIRALSDKPFGINLFVQGPPQPD SGELALALDLLKPWHAELGLGEPVAPASYCQPFDQQLETVLELKPAVASFAFGILDAAQMRALRGAGILVVGTATNLAEG LAWAQLGADAVCAQGREAGGHRGTFIGEQRQSLRPMLSLAYELAQNLPLPVIAAGGIMHGRDIAAAMRHGAVACQLGTAF LRCPESGISPLWKQALAAAKPGSTRLTRAFSGRYARGLDNRYMAEMAQWQDRLPAYPVMNALTGAMRAAAAKAGRSELMS LWAGEGVADAREMPAAELIAQLQAEWQAAYR >Mature_350_residues SAAKWQPLPLKLPVIQAPMAGGATTPQLVAAVGEAGGLGFLAGAMLSPAQIREEAGSIRALSDKPFGINLFVQGPPQPDS GELALALDLLKPWHAELGLGEPVAPASYCQPFDQQLETVLELKPAVASFAFGILDAAQMRALRGAGILVVGTATNLAEGL AWAQLGADAVCAQGREAGGHRGTFIGEQRQSLRPMLSLAYELAQNLPLPVIAAGGIMHGRDIAAAMRHGAVACQLGTAFL RCPESGISPLWKQALAAAKPGSTRLTRAFSGRYARGLDNRYMAEMAQWQDRLPAYPVMNALTGAMRAAAAKAGRSELMSL WAGEGVADAREMPAAELIAQLQAEWQAAYR
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=339, Percent_Identity=28.023598820059, Blast_Score=100, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 36795; Mature: 36664
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAKWQPLPLKLPVIQAPMAGGATTPQLVAAVGEAGGLGFLAGAMLSPAQIREEAGSIR CCCCCCCCCCEECCCEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCEE ALSDKPFGINLFVQGPPQPDSGELALALDLLKPWHAELGLGEPVAPASYCQPFDQQLETV EECCCCCEEEEEEECCCCCCCCCEEEEHHHHCHHHHHCCCCCCCCCHHHCCHHHHHHHHH LELKPAVASFAFGILDAAQMRALRGAGILVVGTATNLAEGLAWAQLGADAVCAQGREAGG HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCHHHHHCCCCCCC HRGTFIGEQRQSLRPMLSLAYELAQNLPLPVIAAGGIMHGRDIAAAMRHGAVACQLGTAF CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCCEEHHHHHH LRCPESGISPLWKQALAAAKPGSTRLTRAFSGRYARGLDNRYMAEMAQWQDRLPAYPVMN HHCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCHHHH ALTGAMRAAAAKAGRSELMSLWAGEGVADAREMPAAELIAQLQAEWQAAYR HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAAKWQPLPLKLPVIQAPMAGGATTPQLVAAVGEAGGLGFLAGAMLSPAQIREEAGSIR CCCCCCCCCEECCCEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCEE ALSDKPFGINLFVQGPPQPDSGELALALDLLKPWHAELGLGEPVAPASYCQPFDQQLETV EECCCCCEEEEEEECCCCCCCCCEEEEHHHHCHHHHHCCCCCCCCCHHHCCHHHHHHHHH LELKPAVASFAFGILDAAQMRALRGAGILVVGTATNLAEGLAWAQLGADAVCAQGREAGG HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCHHHHHCCCCCCC HRGTFIGEQRQSLRPMLSLAYELAQNLPLPVIAAGGIMHGRDIAAAMRHGAVACQLGTAF CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCCEEHHHHHH LRCPESGISPLWKQALAAAKPGSTRLTRAFSGRYARGLDNRYMAEMAQWQDRLPAYPVMN HHCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCHHHH ALTGAMRAAAAKAGRSELMSLWAGEGVADAREMPAAELIAQLQAEWQAAYR HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA