| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499442
Identifier: 34499442
GI number: 34499442
Start: 4315330
End: 4316205
Strand: Direct
Name: 34499442
Synonym: CV_3987
Alternate gene names: NA
Gene position: 4315330-4316205 (Clockwise)
Preceding gene: 34499441
Following gene: 34499443
Centisome position: 90.83
GC content: 55.94
Gene sequence:
>876_bases ATGTATTTCGCAATGGACAAGGGGGATGTGGCATCCCTGGCCAACGCCTTGGCTGAGCAAATTGATGCCAGTCCCATGGA GTGGAACTGGTACGCATTAATGGATGCCGGCTTCGATTACAACCATCGCCCGCTGCAATTGGCCACTGCCAACTGGCCAC TGTATTTTCAGCCGGAATGGGGGGAGTTGCGCGCAGTATCACCGCTATTGATCGACTGCCCAAGGCAGAACAATGCCATT CCGGCCAAGCTGCTACGACACTGCCAAGGTCGGCCAATGCTTGGCTTTGTCGCCAGCGTGCTGGATGTGGAAACATTGCG CGATATCTGGCAGCGAAGCCTGAGCCTAACTACGGCAGATGGTCAACCCTACATTCTACGTTTTGCCGACACGCGCATCG CGGCCACCCTGTCCCAAACCTTGTCGCCTCCATCCTGGCGACGGCTATGCGCGCCTCTGACTCACTGGCTGATAATCGAC CGTGCAGGCACGCTGCAGGCTCTGGACCTTGCCCCATCACATCTGGCTGTCGATGAAAAAGATAGCTGGGAGCTCACTGA GCCGGAATTGGCGGGTTTGCTGCGTTCAGCGGAGCCCGATGCATTGGCCAATAGACTGAGTCAGGATTTTGCCGAATTAT TGCCGGCATCCGGCGCCTTTCTCCACCACTGTTTGCAACGCTCCTGCGCAGCCTTGGAAGAGCATCATATTGAAAATGCA CCCGATCAATTGATGCTCGCCGTGGCAGCTTGCCTGAGTCAAGGACGCATTTTGGACGACCCCAGACTTTCCCAGGTCTT GCAGAGTCATGCCTTGCAAAAAGACGGCTTAGGCGAAAACCTGGCTTCCTTGCTGGATGACATCTCGGCTCTCTGA
Upstream 100 bases:
>100_bases ATCCCGATGCCAGTTTTCCCAGGCAAGCAGTTCTGCTTGCAGTGCATGCTGAATGCGATCAAATCCGGCTCGCCCTTAGC CGGCCAATAAGAGAGGCCCC
Downstream 100 bases:
>100_bases GAAATGGAAACAAACACATTCCAAAAGAAAAAATGGCCCACCCGCATGCTTGTGGTTTCATTTGCAGGCACGTTCATTAT TGGCGCCATGTTCTTGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MYFAMDKGDVASLANALAEQIDASPMEWNWYALMDAGFDYNHRPLQLATANWPLYFQPEWGELRAVSPLLIDCPRQNNAI PAKLLRHCQGRPMLGFVASVLDVETLRDIWQRSLSLTTADGQPYILRFADTRIAATLSQTLSPPSWRRLCAPLTHWLIID RAGTLQALDLAPSHLAVDEKDSWELTEPELAGLLRSAEPDALANRLSQDFAELLPASGAFLHHCLQRSCAALEEHHIENA PDQLMLAVAACLSQGRILDDPRLSQVLQSHALQKDGLGENLASLLDDISAL
Sequences:
>Translated_291_residues MYFAMDKGDVASLANALAEQIDASPMEWNWYALMDAGFDYNHRPLQLATANWPLYFQPEWGELRAVSPLLIDCPRQNNAI PAKLLRHCQGRPMLGFVASVLDVETLRDIWQRSLSLTTADGQPYILRFADTRIAATLSQTLSPPSWRRLCAPLTHWLIID RAGTLQALDLAPSHLAVDEKDSWELTEPELAGLLRSAEPDALANRLSQDFAELLPASGAFLHHCLQRSCAALEEHHIENA PDQLMLAVAACLSQGRILDDPRLSQVLQSHALQKDGLGENLASLLDDISAL >Mature_291_residues MYFAMDKGDVASLANALAEQIDASPMEWNWYALMDAGFDYNHRPLQLATANWPLYFQPEWGELRAVSPLLIDCPRQNNAI PAKLLRHCQGRPMLGFVASVLDVETLRDIWQRSLSLTTADGQPYILRFADTRIAATLSQTLSPPSWRRLCAPLTHWLIID RAGTLQALDLAPSHLAVDEKDSWELTEPELAGLLRSAEPDALANRLSQDFAELLPASGAFLHHCLQRSCAALEEHHIENA PDQLMLAVAACLSQGRILDDPRLSQVLQSHALQKDGLGENLASLLDDISAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32248; Mature: 32248
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFAMDKGDVASLANALAEQIDASPMEWNWYALMDAGFDYNHRPLQLATANWPLYFQPEW CEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEECCCC GELRAVSPLLIDCPRQNNAIPAKLLRHCQGRPMLGFVASVLDVETLRDIWQRSLSLTTAD CCCEECCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECC GQPYILRFADTRIAATLSQTLSPPSWRRLCAPLTHWLIIDRAGTLQALDLAPSHLAVDEK CCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCEEEECCCCCCCCCCCC DSWELTEPELAGLLRSAEPDALANRLSQDFAELLPASGAFLHHCLQRSCAALEEHHIENA CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC PDQLMLAVAACLSQGRILDDPRLSQVLQSHALQKDGLGENLASLLDDISAL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MYFAMDKGDVASLANALAEQIDASPMEWNWYALMDAGFDYNHRPLQLATANWPLYFQPEW CEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEECCCC GELRAVSPLLIDCPRQNNAIPAKLLRHCQGRPMLGFVASVLDVETLRDIWQRSLSLTTAD CCCEECCCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECC GQPYILRFADTRIAATLSQTLSPPSWRRLCAPLTHWLIIDRAGTLQALDLAPSHLAVDEK CCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCEEEECCCCCCCCCCCC DSWELTEPELAGLLRSAEPDALANRLSQDFAELLPASGAFLHHCLQRSCAALEEHHIENA CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC PDQLMLAVAACLSQGRILDDPRLSQVLQSHALQKDGLGENLASLLDDISAL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA