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The map label for this gene is 34499434

Identifier: 34499434

GI number: 34499434

Start: 4303153

End: 4303659

Strand: Reverse

Name: 34499434

Synonym: CV_3979

Alternate gene names: NA

Gene position: 4303659-4303153 (Counterclockwise)

Preceding gene: 34499435

Following gene: 34499433

Centisome position: 90.58

GC content: 61.74

Gene sequence:

>507_bases
ATGGGCAAGGAAAGCACTCAGAAAAAACTGTCGAGGGTCCGTCCGCCGCGCGTGCAGATCACCTATGACGTCGAGATCGG
CGACGCGATCGAAACCAAGGAGCTGCCGTTCGTGCTGGGCGTGCTGGGCGATTATTCCGGCCACAGCAAGGAGCCGCTGC
CGAAGATGAAGGAGCGCAAGTTCGTCCAGATCGACCGCGACAACTTCGACGAGGTGCTGAAGGGCATGGCGCCGCGCCTG
GCGATGAAGGTGGACAACGCGCTGAAGGACGACGGCACCCAGCTGGGCGTGGAATTGAATTTCGAGAGCCTGTCGGATTT
CGAGCCGCAGAACGTGGTTCGCCAGATCGACCCGTTGAACCAGCTGCTGGAGGCCCGCACCCGCCTGGCCGATCTGCGCA
ATAAGCTGGCCGGCAACGACAAGCTCGAAGAGCTGCTGGACGAAGTGGTGCGCGATACCGAGAAGCTGCGCCAGATCGGC
GGCAAGAAAGAAGGAGGCGAGCAGTGA

Upstream 100 bases:

>100_bases
GCTTGTCTTTAGCACAGTTGCGAACCGTTCTATCCAGTCTCGCGCGCAATATTGCGTAGCTTTGTTTTGAACCTTTTTGA
ACATCTTGTAGAGAAGAGCC

Downstream 100 bases:

>100_bases
GCGCGGAATTGCAACAACAGGCGGCGCCGGCCGCGGCGGAAGGCGTCAGCCTGCTCGACAGCATCATCGAGCAGAGCCGC
ATCGCCACCAATGAAAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Cytoplasmic Protein; T6ss S; Protein ImpB; Conserved Protein; Cytoplasmic Protein SciH; Type VI Secretion Protein VasQ; Type VI Secretion System Protein; Type VI Secretion; Type VI Secretion System Core Protein; Type VI Secretion System Protein ImpB

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGKESTQKKLSRVRPPRVQITYDVEIGDAIETKELPFVLGVLGDYSGHSKEPLPKMKERKFVQIDRDNFDEVLKGMAPRL
AMKVDNALKDDGTQLGVELNFESLSDFEPQNVVRQIDPLNQLLEARTRLADLRNKLAGNDKLEELLDEVVRDTEKLRQIG
GKKEGGEQ

Sequences:

>Translated_168_residues
MGKESTQKKLSRVRPPRVQITYDVEIGDAIETKELPFVLGVLGDYSGHSKEPLPKMKERKFVQIDRDNFDEVLKGMAPRL
AMKVDNALKDDGTQLGVELNFESLSDFEPQNVVRQIDPLNQLLEARTRLADLRNKLAGNDKLEELLDEVVRDTEKLRQIG
GKKEGGEQ
>Mature_167_residues
GKESTQKKLSRVRPPRVQITYDVEIGDAIETKELPFVLGVLGDYSGHSKEPLPKMKERKFVQIDRDNFDEVLKGMAPRLA
MKVDNALKDDGTQLGVELNFESLSDFEPQNVVRQIDPLNQLLEARTRLADLRNKLAGNDKLEELLDEVVRDTEKLRQIGG
KKEGGEQ

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19030; Mature: 18899

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKESTQKKLSRVRPPRVQITYDVEIGDAIETKELPFVLGVLGDYSGHSKEPLPKMKERK
CCCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCC
FVQIDRDNFDEVLKGMAPRLAMKVDNALKDDGTQLGVELNFESLSDFEPQNVVRQIDPLN
EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCHHHHHHHHHHHH
QLLEARTRLADLRNKLAGNDKLEELLDEVVRDTEKLRQIGGKKEGGEQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GKESTQKKLSRVRPPRVQITYDVEIGDAIETKELPFVLGVLGDYSGHSKEPLPKMKERK
CCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCC
FVQIDRDNFDEVLKGMAPRLAMKVDNALKDDGTQLGVELNFESLSDFEPQNVVRQIDPLN
EEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCHHHHHHHHHHHH
QLLEARTRLADLRNKLAGNDKLEELLDEVVRDTEKLRQIGGKKEGGEQ
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA