Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34499338

Identifier: 34499338

GI number: 34499338

Start: 4187736

End: 4189835

Strand: Reverse

Name: 34499338

Synonym: CV_3883

Alternate gene names: NA

Gene position: 4189835-4187736 (Counterclockwise)

Preceding gene: 34499339

Following gene: 34499336

Centisome position: 88.19

GC content: 68.33

Gene sequence:

>2100_bases
CTGGACTTGTTGCGGGGGAGCGACTATGTCGGCGACGGCGCCTGGTTCCGCGCCGAGGCTCTGCAGGAGATCGGCGCTTT
CGCCGAGGCGCCGGACGCCGACAGCTACGATGCCCTGTTGCGCATCCATGACCGCTACGGCGCGATGGTGATAGGCCACA
TCCCCGACATGCTGCTGCATGCGCCGTCCCGCGGGACGGCGGACGGCTCGGGCCAGCGTGCCGCCTTGGACGCCCATCTG
GCCCGCAACGGCGGCGGCGCGGACATCGAGGCGGGACCTGCGGCCGGCACGCGCAGAATCCGCTATCCGGCGCCGGAGCA
GGCCAGACTTTCCATCATCGTCGCCGACGCTGGCGACGGTTTCCACCTGTCCCCCTGCATCGATGCCTTGCAAGCCAGCC
TGGGGGGCTGCGCGTGCGAGATCCTCGCCATCGCGGCTGACGGCGAGCCTGGCGACGCGGCCAAGCTGCTGCGCTGCGAC
CCCGGGCTGGGGCTGGCGGCGCGTTTCCAGCTGGGCGCTGAGGCCGCGAGCGGCGATTTCCTGCTGTTCATCGATAGCCG
GGTCGAGCTCGCGCAGCCGGATGGCCTGCAGGCACTGCTGGGTCTTGCCGCCCGCCCGGAAGTCGGCGCCGCCGCGCCGC
GGCTGCTGCGGCCGGATGGCGAGGCTCTCTGGCGCGGCCCGCTGCTGATCGGCGCCGGCGAAGGCGCGGCGGCCTTGTTC
TGCGATGCCGGGGCATCGGAGGCCGGTCATCTGAACCGACAGGCGGTCGAGCATAATCCGGGCGCGCTGCGTCTGGAATG
CCTGCTGATGGCTAAAGCGTTTTACCAGCAAATCGGCGGCATGGACGCCTCTTTGCCGACCTTGCTGGACACTGCGGTCG
ACTTGGGACTCAGAATCCGGGCCGCGGGCAGATTGCCGGTATGGACGCCGTTCGTATCCGCGCGCCGGCATGGCGCGCTG
GATGTGTCCGAGCCCCCGGAAACCTGCGATGCCGATGCCCTGTCTTTGCGCTGGAACGGCTGGCTGGGGCAGGACCCCGC
CCATAACCGCCATTTGAGCCTGGCGGCCGACAAGGCCTTCCAGATAGAGGACGTTTATTCGGCGCAGTGGGATGCCAGCT
TCCATGAGCGGACCAGGGTGCTGGCGCTGCCGGCAGAGAGCAAGGCCACCGAGGCGCGCATGGCATCGCCATTCAGGATT
CTGCAGGAGGACTGCCAGTGCCAGTTGACGCAGATCCCCGCGGGCCAGCGCTTGCCTAGCGCCGGGGAAATCGAGCGGAT
GGCGCCCGACGCGCTGCTGATGTCGGCGCGTTTCGATTCCGCCTCCCTGGCCTGGCTGCGGGGGTATAGGCAGCGCAGGC
CGGATGTGCTGGCGGTGCTGATGCTGGACAAGCTGGATTTCGGCGCGGGAACCACCCACCGCTACGGCCATTCGCTGTTG
CAGGCGATGGCGGGCATGGCGGACAGGGTCATCGTTCCCACCGAGTCTCTTTACCGGATGGCGCTCGCCTTCGCTGACGA
TGTGCGCCTGGTGCCGGACGGTTTGGAGGAGGCGCGCTGGTTCGAACTGCAGTCCTTGCGCCGGGTCGGCAAGAAGCCCA
GGGTCGGCTGGGTAGGCTCGGCAGCCGAGGCCCCCGACCTGCTGATGCTGAGCGGCATCATATTGGCGACCGCGGCTGAG
CTGGACTGGATCGTGCTTGGCGACTGTCCCGAGGTGCTCAAGCCTTGCCTCGCCGAATACCATGCCTTCGATCTGTCCAG
CGACGACTATCCGACCAGGCTGGCCAGCCTGAGTCTGGACATGGCGGTGATGCCCAAGGCCGCCACGCTGGCCAACGAGA
CGGGCAGCCCCTTGCGGATGTTCGAGTTCGGCGCGCTTGGCGTTCCAGTCATCTGCAGCGCTGTCGGCGAACTGGGCCTA
AGCCCGGCGCCGGTGGCGAGGGTGGAGAACGATGTGTCAAGCTGGGGAGAGGCGCTGCGGGAGCTGGCTCGCGACGCGGC
CGCCGCGGCGCAGGCTGGGGATGGCTTGCGCGCCTGGGTGCGGGAGAATTGCGGTTTGAAACGGCATCTGCCCTTATGGC
AGCAGGCAATCAGCCGATAA

Upstream 100 bases:

>100_bases
TGCCGCCTTGAATCCTGCCTGGCAGGCGATTTACAGCGACAGCGACATCATTTCGCGGAACGGCAAACGCAGCCAGCCGG
CCTTCAAGCCGGATTTCAAT

Downstream 100 bases:

>100_bases
AGCCTTATAGCGGGTCATCCGATATCGCTCCGCCTGGCCGCGGAGCGGTTGACGAGGTGATATTGTTGCGCGGGCGGCCG
GAAGAGGCATGAGACCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 699; Mature: 699

Protein sequence:

>699_residues
MDLLRGSDYVGDGAWFRAEALQEIGAFAEAPDADSYDALLRIHDRYGAMVIGHIPDMLLHAPSRGTADGSGQRAALDAHL
ARNGGGADIEAGPAAGTRRIRYPAPEQARLSIIVADAGDGFHLSPCIDALQASLGGCACEILAIAADGEPGDAAKLLRCD
PGLGLAARFQLGAEAASGDFLLFIDSRVELAQPDGLQALLGLAARPEVGAAAPRLLRPDGEALWRGPLLIGAGEGAAALF
CDAGASEAGHLNRQAVEHNPGALRLECLLMAKAFYQQIGGMDASLPTLLDTAVDLGLRIRAAGRLPVWTPFVSARRHGAL
DVSEPPETCDADALSLRWNGWLGQDPAHNRHLSLAADKAFQIEDVYSAQWDASFHERTRVLALPAESKATEARMASPFRI
LQEDCQCQLTQIPAGQRLPSAGEIERMAPDALLMSARFDSASLAWLRGYRQRRPDVLAVLMLDKLDFGAGTTHRYGHSLL
QAMAGMADRVIVPTESLYRMALAFADDVRLVPDGLEEARWFELQSLRRVGKKPRVGWVGSAAEAPDLLMLSGIILATAAE
LDWIVLGDCPEVLKPCLAEYHAFDLSSDDYPTRLASLSLDMAVMPKAATLANETGSPLRMFEFGALGVPVICSAVGELGL
SPAPVARVENDVSSWGEALRELARDAAAAAQAGDGLRAWVRENCGLKRHLPLWQQAISR

Sequences:

>Translated_699_residues
MDLLRGSDYVGDGAWFRAEALQEIGAFAEAPDADSYDALLRIHDRYGAMVIGHIPDMLLHAPSRGTADGSGQRAALDAHL
ARNGGGADIEAGPAAGTRRIRYPAPEQARLSIIVADAGDGFHLSPCIDALQASLGGCACEILAIAADGEPGDAAKLLRCD
PGLGLAARFQLGAEAASGDFLLFIDSRVELAQPDGLQALLGLAARPEVGAAAPRLLRPDGEALWRGPLLIGAGEGAAALF
CDAGASEAGHLNRQAVEHNPGALRLECLLMAKAFYQQIGGMDASLPTLLDTAVDLGLRIRAAGRLPVWTPFVSARRHGAL
DVSEPPETCDADALSLRWNGWLGQDPAHNRHLSLAADKAFQIEDVYSAQWDASFHERTRVLALPAESKATEARMASPFRI
LQEDCQCQLTQIPAGQRLPSAGEIERMAPDALLMSARFDSASLAWLRGYRQRRPDVLAVLMLDKLDFGAGTTHRYGHSLL
QAMAGMADRVIVPTESLYRMALAFADDVRLVPDGLEEARWFELQSLRRVGKKPRVGWVGSAAEAPDLLMLSGIILATAAE
LDWIVLGDCPEVLKPCLAEYHAFDLSSDDYPTRLASLSLDMAVMPKAATLANETGSPLRMFEFGALGVPVICSAVGELGL
SPAPVARVENDVSSWGEALRELARDAAAAAQAGDGLRAWVRENCGLKRHLPLWQQAISR
>Mature_699_residues
MDLLRGSDYVGDGAWFRAEALQEIGAFAEAPDADSYDALLRIHDRYGAMVIGHIPDMLLHAPSRGTADGSGQRAALDAHL
ARNGGGADIEAGPAAGTRRIRYPAPEQARLSIIVADAGDGFHLSPCIDALQASLGGCACEILAIAADGEPGDAAKLLRCD
PGLGLAARFQLGAEAASGDFLLFIDSRVELAQPDGLQALLGLAARPEVGAAAPRLLRPDGEALWRGPLLIGAGEGAAALF
CDAGASEAGHLNRQAVEHNPGALRLECLLMAKAFYQQIGGMDASLPTLLDTAVDLGLRIRAAGRLPVWTPFVSARRHGAL
DVSEPPETCDADALSLRWNGWLGQDPAHNRHLSLAADKAFQIEDVYSAQWDASFHERTRVLALPAESKATEARMASPFRI
LQEDCQCQLTQIPAGQRLPSAGEIERMAPDALLMSARFDSASLAWLRGYRQRRPDVLAVLMLDKLDFGAGTTHRYGHSLL
QAMAGMADRVIVPTESLYRMALAFADDVRLVPDGLEEARWFELQSLRRVGKKPRVGWVGSAAEAPDLLMLSGIILATAAE
LDWIVLGDCPEVLKPCLAEYHAFDLSSDDYPTRLASLSLDMAVMPKAATLANETGSPLRMFEFGALGVPVICSAVGELGL
SPAPVARVENDVSSWGEALRELARDAAAAAQAGDGLRAWVRENCGLKRHLPLWQQAISR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 74613; Mature: 74613

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLRGSDYVGDGAWFRAEALQEIGAFAEAPDADSYDALLRIHDRYGAMVIGHIPDMLLH
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCEEEECCCHHHHC
APSRGTADGSGQRAALDAHLARNGGGADIEAGPAAGTRRIRYPAPEQARLSIIVADAGDG
CCCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCC
FHLSPCIDALQASLGGCACEILAIAADGEPGDAAKLLRCDPGLGLAARFQLGAEAASGDF
CCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHEEECCCCCCEEEEEEECCCCCCCCE
LLFIDSRVELAQPDGLQALLGLAARPEVGAAAPRLLRPDGEALWRGPLLIGAGEGAAALF
EEEEECCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCEEEE
CDAGASEAGHLNRQAVEHNPGALRLECLLMAKAFYQQIGGMDASLPTLLDTAVDLGLRIR
ECCCCCCCCCCCHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEE
AAGRLPVWTPFVSARRHGALDVSEPPETCDADALSLRWNGWLGQDPAHNRHLSLAADKAF
ECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCE
QIEDVYSAQWDASFHERTRVLALPAESKATEARMASPFRILQEDCQCQLTQIPAGQRLPS
EEHHHHCCCCCCCHHHCCEEEEECCCCCHHHHHHCCHHHHHHHHHCEEEEECCCCCCCCC
AGEIERMAPDALLMSARFDSASLAWLRGYRQRRPDVLAVLMLDKLDFGAGTTHRYGHSLL
CCCHHHHCCCHHEEECCCCCHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCHHHHHHHH
QAMAGMADRVIVPTESLYRMALAFADDVRLVPDGLEEARWFELQSLRRVGKKPRVGWVGS
HHHHCCCCEEECCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
AAEAPDLLMLSGIILATAAELDWIVLGDCPEVLKPCLAEYHAFDLSSDDYPTRLASLSLD
CCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC
MAVMPKAATLANETGSPLRMFEFGALGVPVICSAVGELGLSPAPVARVENDVSSWGEALR
HHCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ELARDAAAAAQAGDGLRAWVRENCGLKRHLPLWQQAISR
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MDLLRGSDYVGDGAWFRAEALQEIGAFAEAPDADSYDALLRIHDRYGAMVIGHIPDMLLH
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCEEEECCCHHHHC
APSRGTADGSGQRAALDAHLARNGGGADIEAGPAAGTRRIRYPAPEQARLSIIVADAGDG
CCCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCC
FHLSPCIDALQASLGGCACEILAIAADGEPGDAAKLLRCDPGLGLAARFQLGAEAASGDF
CCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHEEECCCCCCEEEEEEECCCCCCCCE
LLFIDSRVELAQPDGLQALLGLAARPEVGAAAPRLLRPDGEALWRGPLLIGAGEGAAALF
EEEEECCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCEEEE
CDAGASEAGHLNRQAVEHNPGALRLECLLMAKAFYQQIGGMDASLPTLLDTAVDLGLRIR
ECCCCCCCCCCCHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEE
AAGRLPVWTPFVSARRHGALDVSEPPETCDADALSLRWNGWLGQDPAHNRHLSLAADKAF
ECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCE
QIEDVYSAQWDASFHERTRVLALPAESKATEARMASPFRILQEDCQCQLTQIPAGQRLPS
EEHHHHCCCCCCCHHHCCEEEEECCCCCHHHHHHCCHHHHHHHHHCEEEEECCCCCCCCC
AGEIERMAPDALLMSARFDSASLAWLRGYRQRRPDVLAVLMLDKLDFGAGTTHRYGHSLL
CCCHHHHCCCHHEEECCCCCHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCHHHHHHHH
QAMAGMADRVIVPTESLYRMALAFADDVRLVPDGLEEARWFELQSLRRVGKKPRVGWVGS
HHHHCCCCEEECCHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
AAEAPDLLMLSGIILATAAELDWIVLGDCPEVLKPCLAEYHAFDLSSDDYPTRLASLSLD
CCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCC
MAVMPKAATLANETGSPLRMFEFGALGVPVICSAVGELGLSPAPVARVENDVSSWGEALR
HHCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
ELARDAAAAAQAGDGLRAWVRENCGLKRHLPLWQQAISR
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]