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The map label for this gene is yiiM [H]

Identifier: 34499209

GI number: 34499209

Start: 4051684

End: 4052373

Strand: Direct

Name: yiiM [H]

Synonym: CV_3754

Alternate gene names: 34499209

Gene position: 4051684-4052373 (Clockwise)

Preceding gene: 34499208

Following gene: 34499212

Centisome position: 85.28

GC content: 69.57

Gene sequence:

>690_bases
ATGGACGAAACCGTGATCGGCAGCGTGCTCGCCGTTCTGGCAGGCAAAGCCGTGCCCTATGCCCGCCCCGGCGCGCTCAG
CGCCATCGACAAGCAAGCCCGGAACGGACGCGCGGCGGTCGGAACGCTTGGCCTGGAAGGCGACGAGCAGGGCGATCCCC
GTTACCACGGCGGGCCGCACAAGGCGATTCACTTGTACGCTTTCGAGCATTACGCCCGCTGGCGCGACGAGATCGGCCCG
CGCCAAGCGCTGAGCCGGCCCGGCGGTTTCGGCGAAAACCTGAGCACGCTGGGCGTGGACGAGCGCACGCTGTGCCTGGG
CGACCGGCTGGCCATCGGCACCGCGGCGCTGGAAATCTCCCAGGGCCGCCAGCCTTGCTGGAAGCTCAACCACCGCTTCG
ACCAGCGCGACATGGCCCGACGGCTGCAGGACACCGGCCGCACCGGCTGGTACTGCCGGGTGCTGCAGCCCGGCGATATC
GGCGCCGGCGACGACATCCGCCTGTTGGCGCGCCCCTATCCGGAATGGACGCTGGCCAGGCTCGTCGAGGCGTTCTACCG
CCGCGGACTGGAGCGGGAGCTGCTGCTGGAGATCGCCCGGCTGCCGCTGGTGGAATCGTGGCGGGCGCTGATCGAGAAAC
GGCTGGAAAGCGGCCAACTGGAAGACTGGAGCCGCCGGCTGGATGGATAA

Upstream 100 bases:

>100_bases
GGCGAAGTGGGCCGGGTCAGGGTGAAGAAGATAGAAAGCAAGGGCGCGCGCAACAAGCGCGTGGTGGTGGAATTGGTCGA
CTGACGCCGGGAGAAACGCC

Downstream 100 bases:

>100_bases
AAAAAACGGAGGCCGCATGGTCTCCGTTTTTTTACTCGCGCGCCGGCTTAACGAGCGTCCAGCGCCATCTCGTGTTCAGG
ATGCGCCGGCTTCTCGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDETVIGSVLAVLAGKAVPYARPGALSAIDKQARNGRAAVGTLGLEGDEQGDPRYHGGPHKAIHLYAFEHYARWRDEIGP
RQALSRPGGFGENLSTLGVDERTLCLGDRLAIGTAALEISQGRQPCWKLNHRFDQRDMARRLQDTGRTGWYCRVLQPGDI
GAGDDIRLLARPYPEWTLARLVEAFYRRGLERELLLEIARLPLVESWRALIEKRLESGQLEDWSRRLDG

Sequences:

>Translated_229_residues
MDETVIGSVLAVLAGKAVPYARPGALSAIDKQARNGRAAVGTLGLEGDEQGDPRYHGGPHKAIHLYAFEHYARWRDEIGP
RQALSRPGGFGENLSTLGVDERTLCLGDRLAIGTAALEISQGRQPCWKLNHRFDQRDMARRLQDTGRTGWYCRVLQPGDI
GAGDDIRLLARPYPEWTLARLVEAFYRRGLERELLLEIARLPLVESWRALIEKRLESGQLEDWSRRLDG
>Mature_229_residues
MDETVIGSVLAVLAGKAVPYARPGALSAIDKQARNGRAAVGTLGLEGDEQGDPRYHGGPHKAIHLYAFEHYARWRDEIGP
RQALSRPGGFGENLSTLGVDERTLCLGDRLAIGTAALEISQGRQPCWKLNHRFDQRDMARRLQDTGRTGWYCRVLQPGDI
GAGDDIRLLARPYPEWTLARLVEAFYRRGLERELLLEIARLPLVESWRALIEKRLESGQLEDWSRRLDG

Specific function: Unknown

COG id: COG2258

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Escherichia coli, GI87082350, Length=218, Percent_Identity=37.1559633027523, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005163
- InterPro:   IPR005302
- InterPro:   IPR015808
- InterPro:   IPR011037 [H]

Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]

EC number: NA

Molecular weight: Translated: 25665; Mature: 25665

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDETVIGSVLAVLAGKAVPYARPGALSAIDKQARNGRAAVGTLGLEGDEQGDPRYHGGPH
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
KAIHLYAFEHYARWRDEIGPRQALSRPGGFGENLSTLGVDERTLCLGDRLAIGTAALEIS
CEEEEEHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHCCCCCCCEECCCCHHHHHHHHHHH
QGRQPCWKLNHRFDQRDMARRLQDTGRTGWYCRVLQPGDIGAGDDIRLLARPYPEWTLAR
CCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHH
LVEAFYRRGLERELLLEIARLPLVESWRALIEKRLESGQLEDWSRRLDG
HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure
MDETVIGSVLAVLAGKAVPYARPGALSAIDKQARNGRAAVGTLGLEGDEQGDPRYHGGPH
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCC
KAIHLYAFEHYARWRDEIGPRQALSRPGGFGENLSTLGVDERTLCLGDRLAIGTAALEIS
CEEEEEHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHCCCCCCCEECCCCHHHHHHHHHHH
QGRQPCWKLNHRFDQRDMARRLQDTGRTGWYCRVLQPGDIGAGDDIRLLARPYPEWTLAR
CCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHH
LVEAFYRRGLERELLLEIARLPLVESWRALIEKRLESGQLEDWSRRLDG
HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]