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The map label for this gene is ugpQ [H]

Identifier: 34499107

GI number: 34499107

Start: 3951302

End: 3951988

Strand: Reverse

Name: ugpQ [H]

Synonym: CV_3652

Alternate gene names: 34499107

Gene position: 3951988-3951302 (Counterclockwise)

Preceding gene: 34499108

Following gene: 34499105

Centisome position: 83.18

GC content: 70.89

Gene sequence:

>687_bases
CTGGCGCCGGAAAACACCGTCGCCGGCTTCCGCGAGGGCATCCGCTACGGCTACCGCGCCGCCGAGTGCGACGTGAAGCT
GTCGGCCGACAACGTCTGCTTCCTGCTGCACGACGACACCGTGGACCGCACCAGCAACGGCAAGGGCGAAGCAAAAGCCA
AGACCATGGCCGAGTTGTCGCAGCTGGACGCCGGCGGCTGGAAAGGCGCGGCCTTCGCCGGCGAGGCGCTGCCGACGCTG
GCCAATGTGGCGGCCTGCTGCCTGGCGCAGGACATGCTGCTGAATATCGAGATCAAGCCCTGCCCGGGGCGCTTCGAGGA
AACCGGCCGGCTGGTGGCGCAAGAAGCCGCGCGGCTGTGGGCCGGCGCGTCGCCGCCGCCCTTGCTGTCCTCGTTCGAGA
TCGACGCCTTGCGCGCGGCCAAGGCCGCCGAGCCGGCGCTGCCGCGCGCCTTCCTGTGCGAGGAGATTCCGGCCGACTGG
CGCGCCATCCTGGCCGAGCTGGACTGCGTGGCGCTGCACTGCGACCACCAGACCCTGACCGAGCAGCTGGCGCGCGACAT
CAAGGCCGCCGGCTACCAGCTGTTGTGCTACACGGTCAACGATCCGGCCGACGCCCGCCGCTTGCTGGGCTGGGGCGTGG
ACAGCCTGTGCACCGACAGGCTGGACCTGTTGCCGGCGCGCGGCTAG

Upstream 100 bases:

>100_bases
CTGTTCGACGCGGAAACACAGAGGAGAATCGAGCATGCCGCAGCATCGCAAGCAAGCCTGGCCGTATCCTGAGGTCGTCG
CCCACCGCGGCGGCGGCACG

Downstream 100 bases:

>100_bases
CGCTCACTGCGCCCAGCGCTGGAATATGGGCTGCAGCGCGCCGCTCTGCTGCAGCCGTTTCAGCGCCGCCTCGAACTGCC
GCGCGCGCGGATCGCCCTTG

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MAPENTVAGFREGIRYGYRAAECDVKLSADNVCFLLHDDTVDRTSNGKGEAKAKTMAELSQLDAGGWKGAAFAGEALPTL
ANVAACCLAQDMLLNIEIKPCPGRFEETGRLVAQEAARLWAGASPPPLLSSFEIDALRAAKAAEPALPRAFLCEEIPADW
RAILAELDCVALHCDHQTLTEQLARDIKAAGYQLLCYTVNDPADARRLLGWGVDSLCTDRLDLLPARG

Sequences:

>Translated_228_residues
MAPENTVAGFREGIRYGYRAAECDVKLSADNVCFLLHDDTVDRTSNGKGEAKAKTMAELSQLDAGGWKGAAFAGEALPTL
ANVAACCLAQDMLLNIEIKPCPGRFEETGRLVAQEAARLWAGASPPPLLSSFEIDALRAAKAAEPALPRAFLCEEIPADW
RAILAELDCVALHCDHQTLTEQLARDIKAAGYQLLCYTVNDPADARRLLGWGVDSLCTDRLDLLPARG
>Mature_227_residues
APENTVAGFREGIRYGYRAAECDVKLSADNVCFLLHDDTVDRTSNGKGEAKAKTMAELSQLDAGGWKGAAFAGEALPTLA
NVAACCLAQDMLLNIEIKPCPGRFEETGRLVAQEAARLWAGASPPPLLSSFEIDALRAAKAAEPALPRAFLCEEIPADWR
AILAELDCVALHCDHQTLTEQLARDIKAAGYQLLCYTVNDPADARRLLGWGVDSLCTDRLDLLPARG

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1789858, Length=224, Percent_Identity=49.1071428571429, Blast_Score=213, Evalue=9e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 24529; Mature: 24398

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPENTVAGFREGIRYGYRAAECDVKLSADNVCFLLHDDTVDRTSNGKGEAKAKTMAELS
CCCCHHHHHHHHHHHHCCEEECCEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
QLDAGGWKGAAFAGEALPTLANVAACCLAQDMLLNIEIKPCPGRFEETGRLVAQEAARLW
HHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHH
AGASPPPLLSSFEIDALRAAKAAEPALPRAFLCEEIPADWRAILAELDCVALHCDHQTLT
CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHEEECCHHHHH
EQLARDIKAAGYQLLCYTVNDPADARRLLGWGVDSLCTDRLDLLPARG
HHHHHHHHHCCEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
APENTVAGFREGIRYGYRAAECDVKLSADNVCFLLHDDTVDRTSNGKGEAKAKTMAELS
CCCHHHHHHHHHHHHCCEEECCEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH
QLDAGGWKGAAFAGEALPTLANVAACCLAQDMLLNIEIKPCPGRFEETGRLVAQEAARLW
HHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHH
AGASPPPLLSSFEIDALRAAKAAEPALPRAFLCEEIPADWRAILAELDCVALHCDHQTLT
CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHEEECCHHHHH
EQLARDIKAAGYQLLCYTVNDPADARRLLGWGVDSLCTDRLDLLPARG
HHHHHHHHHCCEEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]