| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499078
Identifier: 34499078
GI number: 34499078
Start: 3927450
End: 3928091
Strand: Direct
Name: 34499078
Synonym: CV_3623
Alternate gene names: NA
Gene position: 3927450-3928091 (Clockwise)
Preceding gene: 34499077
Following gene: 34499079
Centisome position: 82.66
GC content: 65.58
Gene sequence:
>642_bases ATGACGGACCGCTACGCCGCGATAGACGCAGACTTCCTCGCCCGCTTCCCGGGCGGTTTCCAGGATCCCGACTGGCAGAC GCTGGCGCGTAGGCACAAAAGCTACGCCAAGGCCGAGGCGCTGTGCCAGCGCGAGCTGACCCGCGGCAAGCTGGACACGG CGCTGGCGAGCGGCAAGCTGGCCGACGCCACCCAGGCCTGCCGCCAGATCATCTCGCTGGCCACCACGGTCAGCACCTTC GAGAAGATCGCCTTCCGCAACTACATGGACAACCGCGACCTGAACCTGCCCTTCGTGCAGGCGCTGCGCGATGTGCTGCA CGATTTCGGTCCGGCCAGCTTTGAAACCTATGTCGACACGCTGGCGATGGCGCGGATGGACCCCAAGGCCAACGCCGCCA AATGGCCTATCGTCAGCTGCTTCCTGGCCTGCTTCGATCCACAGCGCCACGTTTGCATCAAGCCGACCACGGTGAAGAAG GTGGCCGCGCGGCTGGGCGTGGACATCCATTACCAGTCCAGGCCGAACTACGAATGCTACCTGGCGGTGCAGCGGATGGT GCTGGATTTCCGCAGCCGCAGCGCGGTGGCGGCGGACGTGGACAACACGCTGGCGCAGGCGGTGATGTACTGCGCCGTCT GA
Upstream 100 bases:
>100_bases AAGTGATGCAGTTCAACCAGGGCGCGCTGGCGTTCTACGCCCGCCACGGGCTCGCCGCGCAATCCCAGATCATGAGCAAA TCCCTTGCAGGAGCCGCGCG
Downstream 100 bases:
>100_bases ACCCGACACGATTACAAAACCAAAACAAGGAAGAATGATGATGCAACAACTCAAGCTGGCGGTGTCCGGCGCCCAGATCC TGTTCGTCGCCTTCGGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTDRYAAIDADFLARFPGGFQDPDWQTLARRHKSYAKAEALCQRELTRGKLDTALASGKLADATQACRQIISLATTVSTF EKIAFRNYMDNRDLNLPFVQALRDVLHDFGPASFETYVDTLAMARMDPKANAAKWPIVSCFLACFDPQRHVCIKPTTVKK VAARLGVDIHYQSRPNYECYLAVQRMVLDFRSRSAVAADVDNTLAQAVMYCAV
Sequences:
>Translated_213_residues MTDRYAAIDADFLARFPGGFQDPDWQTLARRHKSYAKAEALCQRELTRGKLDTALASGKLADATQACRQIISLATTVSTF EKIAFRNYMDNRDLNLPFVQALRDVLHDFGPASFETYVDTLAMARMDPKANAAKWPIVSCFLACFDPQRHVCIKPTTVKK VAARLGVDIHYQSRPNYECYLAVQRMVLDFRSRSAVAADVDNTLAQAVMYCAV >Mature_212_residues TDRYAAIDADFLARFPGGFQDPDWQTLARRHKSYAKAEALCQRELTRGKLDTALASGKLADATQACRQIISLATTVSTFE KIAFRNYMDNRDLNLPFVQALRDVLHDFGPASFETYVDTLAMARMDPKANAAKWPIVSCFLACFDPQRHVCIKPTTVKKV AARLGVDIHYQSRPNYECYLAVQRMVLDFRSRSAVAADVDNTLAQAVMYCAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23898; Mature: 23766
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRYAAIDADFLARFPGGFQDPDWQTLARRHKSYAKAEALCQRELTRGKLDTALASGKL CCCCHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADATQACRQIISLATTVSTFEKIAFRNYMDNRDLNLPFVQALRDVLHDFGPASFETYVDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH LAMARMDPKANAAKWPIVSCFLACFDPQRHVCIKPTTVKKVAARLGVDIHYQSRPNYECY HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCEEECCCCCHHHH LAVQRMVLDFRSRSAVAADVDNTLAQAVMYCAV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDRYAAIDADFLARFPGGFQDPDWQTLARRHKSYAKAEALCQRELTRGKLDTALASGKL CCCHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ADATQACRQIISLATTVSTFEKIAFRNYMDNRDLNLPFVQALRDVLHDFGPASFETYVDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH LAMARMDPKANAAKWPIVSCFLACFDPQRHVCIKPTTVKKVAARLGVDIHYQSRPNYECY HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCEEECCCCCHHHH LAVQRMVLDFRSRSAVAADVDNTLAQAVMYCAV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA