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The map label for this gene is rmpM [H]

Identifier: 34499026

GI number: 34499026

Start: 3878875

End: 3879555

Strand: Reverse

Name: rmpM [H]

Synonym: CV_3571

Alternate gene names: 34499026

Gene position: 3879555-3878875 (Counterclockwise)

Preceding gene: 34499027

Following gene: 34499025

Centisome position: 81.66

GC content: 56.68

Gene sequence:

>681_bases
ATGACTAAACAGCTGAAACTGAGCGCACTGGTTGCCGCCCTGTTGGTTTCTGCTAGCGCTTTTGCTGCCAAACCGGGTTA
TGCCGTTGACCAATCCACTGACGCAGTGACCCGCAACAGCTACGGCGAATGCTGGAAGACCACCTACTTCGACAAGGCCA
AGGACGGCCTGGTTGAGTGTGGCGACCGCGAAGCCGCCAAGCCGGTTGCCGAAGCTCCGAAGCCGGCCCTGGTTTCCGTG
AAGGAAAAAGTGACCCTGTCCGCCAAGGTTCTGTTCGACTTCAACAAGTCCGTTCTGCGCGCTGACGCCAAGAACGAACT
GGATCCGCTGGTTGCCAAGCTGAAGGCTCACGCCGGCAAGGGCTACCTGAACGGTGTTGAAGTTGACGGTTACACCGACT
TCATGGGTTCCGACAAGCTGAACAACGCGCTGTCGCAAAACCGCGCTGACGCTGTCAAGGCTTACTTCGTGAACGCTGGT
GTGCCGGCCGAGAAAGTGACCTCCATCGGCAAGGGCAAGGCTGAAGCCAAGATGACCGAAGAGTGCAAGGCCAAGTTCCC
GAAATACGCGAAGAACAAGAAGCAAAACGCCGAAATCAAGGCTTGCATCGAGTCTGACCGCCGCGTAGAAGTGACCATCG
ACGCTGTTAAAGAGTCCGTGGTAGAGAAGTCCGGCAACTAA

Upstream 100 bases:

>100_bases
CAGCATGTAGCCATCCCTGATGTTTGCAGTCAACTTAGTTCGCGTGGTCTTTGCGTCAGCCCGCATTGCTACCCATTTTA
TAGATTAAAGAGGGAATAAC

Downstream 100 bases:

>100_bases
TCGTTGCTCGGCGCAAAAAAAGCCCCGCGATCCGCGGGGCTTTTTGTTTGCCTCCGCGCGGGATCATGGCTGGACGCTAT
CGCTTGCTGGCGGCTACAAT

Product: outer membrane protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTKQLKLSALVAALLVSASAFAAKPGYAVDQSTDAVTRNSYGECWKTTYFDKAKDGLVECGDREAAKPVAEAPKPALVSV
KEKVTLSAKVLFDFNKSVLRADAKNELDPLVAKLKAHAGKGYLNGVEVDGYTDFMGSDKLNNALSQNRADAVKAYFVNAG
VPAEKVTSIGKGKAEAKMTEECKAKFPKYAKNKKQNAEIKACIESDRRVEVTIDAVKESVVEKSGN

Sequences:

>Translated_226_residues
MTKQLKLSALVAALLVSASAFAAKPGYAVDQSTDAVTRNSYGECWKTTYFDKAKDGLVECGDREAAKPVAEAPKPALVSV
KEKVTLSAKVLFDFNKSVLRADAKNELDPLVAKLKAHAGKGYLNGVEVDGYTDFMGSDKLNNALSQNRADAVKAYFVNAG
VPAEKVTSIGKGKAEAKMTEECKAKFPKYAKNKKQNAEIKACIESDRRVEVTIDAVKESVVEKSGN
>Mature_225_residues
TKQLKLSALVAALLVSASAFAAKPGYAVDQSTDAVTRNSYGECWKTTYFDKAKDGLVECGDREAAKPVAEAPKPALVSVK
EKVTLSAKVLFDFNKSVLRADAKNELDPLVAKLKAHAGKGYLNGVEVDGYTDFMGSDKLNNALSQNRADAVKAYFVNAGV
PAEKVTSIGKGKAEAKMTEECKAKFPKYAKNKKQNAEIKACIESDRRVEVTIDAVKESVVEKSGN

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=141, Percent_Identity=34.7517730496454, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 24287; Mature: 24156

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQLKLSALVAALLVSASAFAAKPGYAVDQSTDAVTRNSYGECWKTTYFDKAKDGLVEC
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCC
GDREAAKPVAEAPKPALVSVKEKVTLSAKVLFDFNKSVLRADAKNELDPLVAKLKAHAGK
CCCHHCCCHHHCCCCCCEEHHHHHEEEEHEEECCCHHHHHHCCCCHHHHHHHHHHHHCCC
GYLNGVEVDGYTDFMGSDKLNNALSQNRADAVKAYFVNAGVPAEKVTSIGKGKAEAKMTE
CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHCCCCCHHHHHHH
ECKAKFPKYAKNKKQNAEIKACIESDRRVEVTIDAVKESVVEKSGN
HHHHHCCHHHCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKQLKLSALVAALLVSASAFAAKPGYAVDQSTDAVTRNSYGECWKTTYFDKAKDGLVEC
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCC
GDREAAKPVAEAPKPALVSVKEKVTLSAKVLFDFNKSVLRADAKNELDPLVAKLKAHAGK
CCCHHCCCHHHCCCCCCEEHHHHHEEEEHEEECCCHHHHHHCCCCHHHHHHHHHHHHCCC
GYLNGVEVDGYTDFMGSDKLNNALSQNRADAVKAYFVNAGVPAEKVTSIGKGKAEAKMTE
CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHCCCCCHHHHHHH
ECKAKFPKYAKNKKQNAEIKACIESDRRVEVTIDAVKESVVEKSGN
HHHHHCCHHHCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]