Click here to switch to the map view.

The map label for this gene is yohL [C]

Identifier: 34498951

GI number: 34498951

Start: 3791651

End: 3791923

Strand: Direct

Name: yohL [C]

Synonym: CV_3496

Alternate gene names: 34498951

Gene position: 3791651-3791923 (Clockwise)

Preceding gene: 34498948

Following gene: 34498954

Centisome position: 79.81

GC content: 65.93

Gene sequence:

>273_bases
ATGTCGCACACGGTACGGGACAAGGCCAAGCTGCTGGCGCGGGTGCGCCGCCTGCAGGGCCAGGCCGCCGCGCTGGAAAA
ACAGCTGGAAAACGATGGCGACTGTTCGGCCATCCTGCAGCAGATCGCCGCGATACGCGGCGCGGTCAACGGCCTGATGC
TGGCGGTGATGGAAGGCCACCTGACCGACCACGTGGTCAAGGAGCCGGAGCTGGCGCAACGCCAGCACGACCTCGATGCC
GTGCTGCAGGTGCTCCGCTCCTATCTGAAATAG

Upstream 100 bases:

>100_bases
AAGGAAGATGCGGGGCATTATACTCACCCCCAGTATCAAAATACTATCCCCCAGTATATGCCATGCTAAGATCGATCAAT
CGGATACGGAGAATCACGCG

Downstream 100 bases:

>100_bases
CGCCCGCTCAAGGCTTGCGCACGTGCACCACGCCGGTCATGTACGGGTGCACCGCGCAGAAGTAGGCGTAGTCGCCCTCC
TTGTCGAACACGTGCTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MSHTVRDKAKLLARVRRLQGQAAALEKQLENDGDCSAILQQIAAIRGAVNGLMLAVMEGHLTDHVVKEPELAQRQHDLDA
VLQVLRSYLK

Sequences:

>Translated_90_residues
MSHTVRDKAKLLARVRRLQGQAAALEKQLENDGDCSAILQQIAAIRGAVNGLMLAVMEGHLTDHVVKEPELAQRQHDLDA
VLQVLRSYLK
>Mature_89_residues
SHTVRDKAKLLARVRRLQGQAAALEKQLENDGDCSAILQQIAAIRGAVNGLMLAVMEGHLTDHVVKEPELAQRQHDLDAV
LQVLRSYLK

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frmR/rcnR family [H]

Homologues:

Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=58.8888888888889, Blast_Score=109, Evalue=3e-26,
Organism=Escherichia coli, GI87081725, Length=91, Percent_Identity=45.0549450549451, Blast_Score=82, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9966; Mature: 9835

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTVRDKAKLLARVRRLQGQAAALEKQLENDGDCSAILQQIAAIRGAVNGLMLAVMEGH
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTDHVVKEPELAQRQHDLDAVLQVLRSYLK
HHHHHHCCCHHHHHHCCHHHHHHHHHHHHC
>Mature Secondary Structure 
SHTVRDKAKLLARVRRLQGQAAALEKQLENDGDCSAILQQIAAIRGAVNGLMLAVMEGH
CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTDHVVKEPELAQRQHDLDAVLQVLRSYLK
HHHHHHCCCHHHHHHCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA