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The map label for this gene is gbpA [H]

Identifier: 34498944

GI number: 34498944

Start: 3782634

End: 3783212

Strand: Reverse

Name: gbpA [H]

Synonym: CV_3489

Alternate gene names: 34498944

Gene position: 3783212-3782634 (Counterclockwise)

Preceding gene: 34498947

Following gene: 34498943

Centisome position: 79.63

GC content: 66.49

Gene sequence:

>579_bases
ATGGCCAGATCTTCGAGCCCGCTTCGCGCGGCCGGCTGTGCGTGGACGGGTCAACGCGCAATGCCCGTTGCAGGGCTGGC
AGGTCAACGGCCTGGAGAGCGGCAAGTTCTTCCCGGCGCGGGAGGCCCGCCTGCTCGACCCGCTGGCGCCATCCGACGCC
GTCAATGCCAGGCCGCCGGCAGGATAGCCAGCGCCGGGCAAGCGCATTCGGCGGTGCTGGACGAGCAGAGCGCTGTCCGC
TGGCACAAGCCTCCAGTCAAATCCGGCCAGATGCTGGAACTCGAGTGGAGCTATCACGCCAGCCACCTGACCCGCCGCTG
GAATGACTTCGTCACCCAGGCGTGCTGGGATCCAAACCGGCCGCTGGCGCGCGACCAGTTCGAGTCCGAGCCGTTTTACA
AGGCCGAGCTGACCGCACAGCCGTTCTGGGAACACCAGGCCGAGCTGACGCCGCCGCAACAGACCATCCACCAGGTCCGC
CTGTCGGAGCGCCGCGGCTATCACGTGGTGCTGGCGGCATGGGAAGTGGCCGACACCGGCAATGCCTTCTATCAGGTGAT
CGATTTCAATTTCTCGTGA

Upstream 100 bases:

>100_bases
CGCTGCGAACAGCCGGACGATCTGTCCGGTTTTCCAATCCATACAGGAGATGCAATGAGTTAGACCAAGGTGTGGTCCCA
GTTCGTCGCCCAGCCTCGCC

Downstream 100 bases:

>100_bases
CGCGCGCGCGCGGTGTTGCCGCTGTAGTTTTGTGACACAGATCAAATAAACATGTATTATTTGAACATCTTTTAAGAATC
CCCGGTCGGTAGGGGATTTT

Product: chitin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MARSSSPLRAAGCAWTGQRAMPVAGLAGQRPGERQVLPGAGGPPARPAGAIRRRQCQAAGRIASAGQAHSAVLDEQSAVR
WHKPPVKSGQMLELEWSYHASHLTRRWNDFVTQACWDPNRPLARDQFESEPFYKAELTAQPFWEHQAELTPPQQTIHQVR
LSERRGYHVVLAAWEVADTGNAFYQVIDFNFS

Sequences:

>Translated_192_residues
MARSSSPLRAAGCAWTGQRAMPVAGLAGQRPGERQVLPGAGGPPARPAGAIRRRQCQAAGRIASAGQAHSAVLDEQSAVR
WHKPPVKSGQMLELEWSYHASHLTRRWNDFVTQACWDPNRPLARDQFESEPFYKAELTAQPFWEHQAELTPPQQTIHQVR
LSERRGYHVVLAAWEVADTGNAFYQVIDFNFS
>Mature_191_residues
ARSSSPLRAAGCAWTGQRAMPVAGLAGQRPGERQVLPGAGGPPARPAGAIRRRQCQAAGRIASAGQAHSAVLDEQSAVRW
HKPPVKSGQMLELEWSYHASHLTRRWNDFVTQACWDPNRPLARDQFESEPFYKAELTAQPFWEHQAELTPPQQTIHQVRL
SERRGYHVVLAAWEVADTGNAFYQVIDFNFS

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 21380; Mature: 21249

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSSSPLRAAGCAWTGQRAMPVAGLAGQRPGERQVLPGAGGPPARPAGAIRRRQCQAAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH
RIASAGQAHSAVLDEQSAVRWHKPPVKSGQMLELEWSYHASHLTRRWNDFVTQACWDPNR
HHHCCCCHHHHHHCCCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCC
PLARDQFESEPFYKAELTAQPFWEHQAELTPPQQTIHQVRLSERRGYHVVLAAWEVADTG
CCCCCCCCCCCCEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCC
NAFYQVIDFNFS
CEEEEEEEECCC
>Mature Secondary Structure 
ARSSSPLRAAGCAWTGQRAMPVAGLAGQRPGERQVLPGAGGPPARPAGAIRRRQCQAAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH
RIASAGQAHSAVLDEQSAVRWHKPPVKSGQMLELEWSYHASHLTRRWNDFVTQACWDPNR
HHHCCCCHHHHHHCCCCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCC
PLARDQFESEPFYKAELTAQPFWEHQAELTPPQQTIHQVRLSERRGYHVVLAAWEVADTG
CCCCCCCCCCCCEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCC
NAFYQVIDFNFS
CEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA