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The map label for this gene is rsmI [H]

Identifier: 34498876

GI number: 34498876

Start: 3712925

End: 3713629

Strand: Direct

Name: rsmI [H]

Synonym: CV_3421

Alternate gene names: 34498876

Gene position: 3712925-3713629 (Clockwise)

Preceding gene: 34498875

Following gene: 34498877

Centisome position: 78.15

GC content: 68.79

Gene sequence:

>705_bases
ATGAGCGGCGCCCTCTTCCTGATCCCCGCCCCGCTCGGCGACGAGACCGTCGCCTGGCTGCCGGAAGGCGAGCGCGCCAA
GGTCGTCCACATCACCCATTTCGTCGTCGAGGCGGAAAAGACCGCGCGCAAGCACCTGAAGGCGCTGGGCGTGACCACGC
CCATCCGCGAGCTGTCGATGTCCACGCTGAACGAGCACACCAAGGAGACCGACGTCGCCGCGCTGCTGGCGCCGCTGCAA
GCCGGCCACGACGTCGGCCTGATCTCCGAGGCCGGCTGCCCGGCGGTGGCCGACCCGGGCGCCCAGCTGGTGGCGCTGGC
CCACCAGCGCGACATCCGCGTCGAGCCGCTGATCGGCCCCTCGTCCATCCTGCTGGCGCTGATGGCCAGCGGCGCCAACG
GCCAATGCTTCGCCTTCCACGGCTACCTGCCGGTGGACGCCGCGGAAAAATCCAAGCTGGTGAAAGAGCTGGAACAGCGT
TCGCGCAAGCACAACGAGACCCAGCTGTTCATCGAGACGCCGTACCGCAACAACGCGCTGCTGGCGCAGCTGCGCGAAAC
GCTGGCGCCGTCCACCCGGCTTGCGGTAGCCTGCGATCTGACCTTGCCGACCCAAACCATCGTCAGCCACCGCGTGCAGG
ATTGGCCGCAGAACCCGCCCGACCTGCACAAGCGGCCGGCCATCTTCGTGATCCACGCCGCTTGA

Upstream 100 bases:

>100_bases
TGCTGGAAAAGGTGGAATCCGACGACCCCAACGCGCTGATCGGCGTGCCGCTGTTCCAGTTGATCACCATGCTCGGCAAC
GAGGGCGTGGAGGTGCTGAA

Downstream 100 bases:

>100_bases
GACGCGCCGCCATGCCCAAGAACACGCCCATCATCCGGTCGCTGCTGGATACCGATCTGTACAAGTTCACCATGCTGCAG
GTGGTGTTGCACCAATTCCC

Product: transmembrane protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSGALFLIPAPLGDETVAWLPEGERAKVVHITHFVVEAEKTARKHLKALGVTTPIRELSMSTLNEHTKETDVAALLAPLQ
AGHDVGLISEAGCPAVADPGAQLVALAHQRDIRVEPLIGPSSILLALMASGANGQCFAFHGYLPVDAAEKSKLVKELEQR
SRKHNETQLFIETPYRNNALLAQLRETLAPSTRLAVACDLTLPTQTIVSHRVQDWPQNPPDLHKRPAIFVIHAA

Sequences:

>Translated_234_residues
MSGALFLIPAPLGDETVAWLPEGERAKVVHITHFVVEAEKTARKHLKALGVTTPIRELSMSTLNEHTKETDVAALLAPLQ
AGHDVGLISEAGCPAVADPGAQLVALAHQRDIRVEPLIGPSSILLALMASGANGQCFAFHGYLPVDAAEKSKLVKELEQR
SRKHNETQLFIETPYRNNALLAQLRETLAPSTRLAVACDLTLPTQTIVSHRVQDWPQNPPDLHKRPAIFVIHAA
>Mature_233_residues
SGALFLIPAPLGDETVAWLPEGERAKVVHITHFVVEAEKTARKHLKALGVTTPIRELSMSTLNEHTKETDVAALLAPLQA
GHDVGLISEAGCPAVADPGAQLVALAHQRDIRVEPLIGPSSILLALMASGANGQCFAFHGYLPVDAAEKSKLVKELEQRS
RKHNETQLFIETPYRNNALLAQLRETLAPSTRLAVACDLTLPTQTIVSHRVQDWPQNPPDLHKRPAIFVIHAA

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=209, Percent_Identity=30.1435406698565, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25374; Mature: 25242

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGALFLIPAPLGDETVAWLPEGERAKVVHITHFVVEAEKTARKHLKALGVTTPIRELSM
CCCEEEEEECCCCCCEEEECCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHH
STLNEHTKETDVAALLAPLQAGHDVGLISEAGCPAVADPGAQLVALAHQRDIRVEPLIGP
HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHEEEEECCCCCEEECCCCH
SSILLALMASGANGQCFAFHGYLPVDAAEKSKLVKELEQRSRKHNETQLFIETPYRNNAL
HHHHHHHHHCCCCCCEEEEECEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
LAQLRETLAPSTRLAVACDLTLPTQTIVSHRVQDWPQNPPDLHKRPAIFVIHAA
HHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SGALFLIPAPLGDETVAWLPEGERAKVVHITHFVVEAEKTARKHLKALGVTTPIRELSM
CCEEEEEECCCCCCEEEECCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHH
STLNEHTKETDVAALLAPLQAGHDVGLISEAGCPAVADPGAQLVALAHQRDIRVEPLIGP
HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHEEEEECCCCCEEECCCCH
SSILLALMASGANGQCFAFHGYLPVDAAEKSKLVKELEQRSRKHNETQLFIETPYRNNAL
HHHHHHHHHCCCCCCEEEEECEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHH
LAQLRETLAPSTRLAVACDLTLPTQTIVSHRVQDWPQNPPDLHKRPAIFVIHAA
HHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]