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The map label for this gene is yceD [C]

Identifier: 34498874

GI number: 34498874

Start: 3711726

End: 3712247

Strand: Reverse

Name: yceD [C]

Synonym: CV_3419

Alternate gene names: 34498874

Gene position: 3712247-3711726 (Counterclockwise)

Preceding gene: 34498878

Following gene: 34498873

Centisome position: 78.13

GC content: 60.92

Gene sequence:

>522_bases
TTGTACCATGCGGAGTTTATGTCTAAACCGATTTTGATCGATCCGCTCAAGTTCGCCCGGGAAGGGGCTTCGCTGTCCGG
CAAGTTGCCGGTAAGCGGGCTCGACGAGCGCGTGCATGACGACCTGTCCGACACCTCTGGCGAGGTGTCGTACCGGCTCG
AGGGCTTTCGTGACGAGCTGCAGCGCCCCGCGCTGCGCATCCGGCTTGAGGCCGGCCTGAACGTCACCTGTCAGCGCTGT
CTGGACGGCATGCCGTTCAGCCTAGACACCGATTCGGTGATCACGCTGTTCACCAGCCAGGAAAAGCTGGAAGAAGCCTG
CGAGCTGGACGAGGAGTTGGACGCCGTCCTCGCCGAACCCGAACTCGACGTGGCTGCGCTGATCGAAGACGAAATCATTA
TGGGCTTGCCGCATGCGCCGAAACACGACGAATGCGGCAGGGAAACTCTCTCGCTCGCCAAGGCTGACAAGCCCAACCCG
TTTGCGGTACTGGCGACGCTTAAGAGACCCAAGTCCGAGTAA

Upstream 100 bases:

>100_bases
TGATTCGAGCCGGTTGGCGGCGATGCCGGCGGCGCGGGCGGCTCGTCCGCGGCCTCGCTTCGGCCTCGCCTTGTTTCTTT
TGACAAATCAGGGGAATGGA

Downstream 100 bases:

>100_bases
CCCGGATCCGCTGGCGCGGATTCACTTGAATTTCTTAGGAGTCGACCATGGCTGTTCAACAGAACAAAAAGTCCCCGTCC
AAGCGCGGCATGCATCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MYHAEFMSKPILIDPLKFAREGASLSGKLPVSGLDERVHDDLSDTSGEVSYRLEGFRDELQRPALRIRLEAGLNVTCQRC
LDGMPFSLDTDSVITLFTSQEKLEEACELDEELDAVLAEPELDVAALIEDEIIMGLPHAPKHDECGRETLSLAKADKPNP
FAVLATLKRPKSE

Sequences:

>Translated_173_residues
MYHAEFMSKPILIDPLKFAREGASLSGKLPVSGLDERVHDDLSDTSGEVSYRLEGFRDELQRPALRIRLEAGLNVTCQRC
LDGMPFSLDTDSVITLFTSQEKLEEACELDEELDAVLAEPELDVAALIEDEIIMGLPHAPKHDECGRETLSLAKADKPNP
FAVLATLKRPKSE
>Mature_173_residues
MYHAEFMSKPILIDPLKFAREGASLSGKLPVSGLDERVHDDLSDTSGEVSYRLEGFRDELQRPALRIRLEAGLNVTCQRC
LDGMPFSLDTDSVITLFTSQEKLEEACELDEELDAVLAEPELDVAALIEDEIIMGLPHAPKHDECGRETLSLAKADKPNP
FAVLATLKRPKSE

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787329, Length=170, Percent_Identity=30.5882352941176, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19165; Mature: 19165

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHAEFMSKPILIDPLKFAREGASLSGKLPVSGLDERVHDDLSDTSGEVSYRLEGFRDEL
CCCHHHHCCCCEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHH
QRPALRIRLEAGLNVTCQRCLDGMPFSLDTDSVITLFTSQEKLEEACELDEELDAVLAEP
CCCCEEEEECCCCCEEHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHCCHHHHHHHHCCC
ELDVAALIEDEIIMGLPHAPKHDECGRETLSLAKADKPNPFAVLATLKRPKSE
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MYHAEFMSKPILIDPLKFAREGASLSGKLPVSGLDERVHDDLSDTSGEVSYRLEGFRDEL
CCCHHHHCCCCEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHH
QRPALRIRLEAGLNVTCQRCLDGMPFSLDTDSVITLFTSQEKLEEACELDEELDAVLAEP
CCCCEEEEECCCCCEEHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHCCHHHHHHHHCCC
ELDVAALIEDEIIMGLPHAPKHDECGRETLSLAKADKPNPFAVLATLKRPKSE
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA