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The map label for this gene is ynfM [H]

Identifier: 34498858

GI number: 34498858

Start: 3697721

End: 3698974

Strand: Reverse

Name: ynfM [H]

Synonym: CV_3403

Alternate gene names: 34498858

Gene position: 3698974-3697721 (Counterclockwise)

Preceding gene: 34498859

Following gene: 34498854

Centisome position: 77.86

GC content: 70.33

Gene sequence:

>1254_bases
GTGTCCGCCCCCGCCCCCTCCGCAGCGCTGTCAGAGCGCCAGACCGATTCCGTTTCGCCCGCCGGCAAGCTTCACGCCGG
CACGCCGGCCTTCCGTTCCACCGCCCGCGCGATGTTCGTCGGCGGTTTCTGCACGTTCGCCATGGTGTACGGCACCCAGC
CCTTGATGCCGCTGTTCGCCCATGACTTTTCGCTGACGCCGGCCGCGGCCAGCGGCGTGGTGTCGATGTCCACCGGCGCG
CTGGCGCTGGCGCTGATTCCGGCCAGCTTGCTGGCCGACCGCTTCGGCCGCCGCGCGCTGATGAACCTGGCGCTGGCGCT
GGGCGCGGTCTTGATGCTGCTGTCCGCCTTCGTCGCCGGCTTCGGCGCCTTCCTGCAGCTGCGCGCGGTGTTCGGCCTGG
TGATGGCCGGCTTGCCGGCGGTGGCGATGGCCTATCTGAGCGAGGAGGTGGACGCCAGGTCGCTGGGCCATTCGATGGGG
CTCTACATCGCGGGCAACGCGTTGGGCGGCATGTGCGGCCGGTTGCTGGCCTCGCTGCTGGCCGACCATGTCGGCTGGCG
CGGCGCGGTGCTGGCGCTGGCCTTGATCGGCTGCGTCGGCGCCTGGCAGTTCTGGCGCTGGCTGCCGGCCTCGCGCCATT
TCCAGCCGCGCCGGCACGATTTTTCCCGCATGGGGCGGGAATTGAGCGGCATGCTGCGCGATGGCGGGCTGCCCTGGCTG
TTCGTCACTGCCTTCCTGCTGATGGGCTGTTTCGTCAGCCTGTACAACTACCTGGGCTTTCGCCTGCTGGCCGCGCCGTT
CCATCTGAGCCAGAGCGCGCTGGCGCTGGTGTTCTCGCTGTACGTGGTGGGCATCTGGTCGTCCGCGTGGGTCGGGCGGC
TGGCCGACGGGCTGGGCCGGCGCAACGTGCTGTGGATGATGGTGGCGATGATGCTGGCCGGTTTGGCGCTGACGCTGGCC
GACACCTTGTGGCTGCTGGTGCCGGGCGTGGCGCTGTTCACTTTCGGCTTCTTCGCCGCGCATTCGGTGGCCAGCAGCTG
GGTGGGCCTGCGGGCCAGGGAGGGCAGGGCCTTGGCCTCGGCGCTGTACCTGACCGCCTATTACCTGGGCTCCAGCGTGT
TCGGCTCGATGTCCGGCCTGATGTGGGGACGCGGCGGCTGGCACGGCGTGGCCTCGGCGGTGGCGCTGGCGTTGCTGGTG
CTGCTGGGCATCAGCCTGTGGCTGAGGCGGCTGCAGCCCTTGCCGCCGCATTGA

Upstream 100 bases:

>100_bases
ATTGATACTTTAAAAGTATTAATCATGGTTGAAATATATATTGGACTGTGGTTTTACCCAAGCCTAAGCTGACGGTGTCG
TTAAAGAAGAGATTGATGCC

Downstream 100 bases:

>100_bases
ACGATGGACGTAAAAAAGCCCCGCCGGATCCGGCGGGGCTTTTTTGCGGGCGCTTACTGGATGATGCCGCCGCCCAGGCA
GATGTCGCCATGGTAGAGCA

Product: MFS family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MSAPAPSAALSERQTDSVSPAGKLHAGTPAFRSTARAMFVGGFCTFAMVYGTQPLMPLFAHDFSLTPAAASGVVSMSTGA
LALALIPASLLADRFGRRALMNLALALGAVLMLLSAFVAGFGAFLQLRAVFGLVMAGLPAVAMAYLSEEVDARSLGHSMG
LYIAGNALGGMCGRLLASLLADHVGWRGAVLALALIGCVGAWQFWRWLPASRHFQPRRHDFSRMGRELSGMLRDGGLPWL
FVTAFLLMGCFVSLYNYLGFRLLAAPFHLSQSALALVFSLYVVGIWSSAWVGRLADGLGRRNVLWMMVAMMLAGLALTLA
DTLWLLVPGVALFTFGFFAAHSVASSWVGLRAREGRALASALYLTAYYLGSSVFGSMSGLMWGRGGWHGVASAVALALLV
LLGISLWLRRLQPLPPH

Sequences:

>Translated_417_residues
MSAPAPSAALSERQTDSVSPAGKLHAGTPAFRSTARAMFVGGFCTFAMVYGTQPLMPLFAHDFSLTPAAASGVVSMSTGA
LALALIPASLLADRFGRRALMNLALALGAVLMLLSAFVAGFGAFLQLRAVFGLVMAGLPAVAMAYLSEEVDARSLGHSMG
LYIAGNALGGMCGRLLASLLADHVGWRGAVLALALIGCVGAWQFWRWLPASRHFQPRRHDFSRMGRELSGMLRDGGLPWL
FVTAFLLMGCFVSLYNYLGFRLLAAPFHLSQSALALVFSLYVVGIWSSAWVGRLADGLGRRNVLWMMVAMMLAGLALTLA
DTLWLLVPGVALFTFGFFAAHSVASSWVGLRAREGRALASALYLTAYYLGSSVFGSMSGLMWGRGGWHGVASAVALALLV
LLGISLWLRRLQPLPPH
>Mature_416_residues
SAPAPSAALSERQTDSVSPAGKLHAGTPAFRSTARAMFVGGFCTFAMVYGTQPLMPLFAHDFSLTPAAASGVVSMSTGAL
ALALIPASLLADRFGRRALMNLALALGAVLMLLSAFVAGFGAFLQLRAVFGLVMAGLPAVAMAYLSEEVDARSLGHSMGL
YIAGNALGGMCGRLLASLLADHVGWRGAVLALALIGCVGAWQFWRWLPASRHFQPRRHDFSRMGRELSGMLRDGGLPWLF
VTAFLLMGCFVSLYNYLGFRLLAAPFHLSQSALALVFSLYVVGIWSSAWVGRLADGLGRRNVLWMMVAMMLAGLALTLAD
TLWLLVPGVALFTFGFFAAHSVASSWVGLRAREGRALASALYLTAYYLGSSVFGSMSGLMWGRGGWHGVASAVALALLVL
LGISLWLRRLQPLPPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=407, Percent_Identity=42.7518427518428, Blast_Score=308, Evalue=3e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44332; Mature: 44201

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: PS00178 AA_TRNA_LIGASE_I ; PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPAPSAALSERQTDSVSPAGKLHAGTPAFRSTARAMFVGGFCTFAMVYGTQPLMPLFA
CCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
HDFSLTPAAASGVVSMSTGALALALIPASLLADRFGRRALMNLALALGAVLMLLSAFVAG
CCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGAFLQLRAVFGLVMAGLPAVAMAYLSEEVDARSLGHSMGLYIAGNALGGMCGRLLASLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHH
ADHVGWRGAVLALALIGCVGAWQFWRWLPASRHFQPRRHDFSRMGRELSGMLRDGGLPWL
HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
FVTAFLLMGCFVSLYNYLGFRLLAAPFHLSQSALALVFSLYVVGIWSSAWVGRLADGLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RNVLWMMVAMMLAGLALTLADTLWLLVPGVALFTFGFFAAHSVASSWVGLRAREGRALAS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHH
ALYLTAYYLGSSVFGSMSGLMWGRGGWHGVASAVALALLVLLGISLWLRRLQPLPPH
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAPAPSAALSERQTDSVSPAGKLHAGTPAFRSTARAMFVGGFCTFAMVYGTQPLMPLFA
CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
HDFSLTPAAASGVVSMSTGALALALIPASLLADRFGRRALMNLALALGAVLMLLSAFVAG
CCCCCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGAFLQLRAVFGLVMAGLPAVAMAYLSEEVDARSLGHSMGLYIAGNALGGMCGRLLASLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHH
ADHVGWRGAVLALALIGCVGAWQFWRWLPASRHFQPRRHDFSRMGRELSGMLRDGGLPWL
HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHH
FVTAFLLMGCFVSLYNYLGFRLLAAPFHLSQSALALVFSLYVVGIWSSAWVGRLADGLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RNVLWMMVAMMLAGLALTLADTLWLLVPGVALFTFGFFAAHSVASSWVGLRAREGRALAS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHH
ALYLTAYYLGSSVFGSMSGLMWGRGGWHGVASAVALALLVLLGISLWLRRLQPLPPH
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]